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  Chromosome 4 - YAC Map - Single Contig
 

Chromosome 4 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_006111 NT_022865 NT_006081 NT_029956 NT_006051 NT_034692 NT_033060 NT_006362
NT_006307 NT_006350 NT_006342 NT_029958 NT_034756 NT_016407 NT_034693 NT_006344
NT_034748 NT_006316 NT_023052 NT_006189 NT_022794 NT_006305 NT_034694 NT_022751
NT_016297 NT_022782 NT_006238 NT_022853 NT_034695 NT_034696 NT_022778 NT_022836
NT_034697 NT_030640 NT_006216 NT_034698 NT_034699 NT_022760 NT_006109 NT_006328
NT_034700 NT_006204 NT_034701 NT_006397 NT_006383 NT_034702 NT_034703 NT_006365
NT_028147 NT_006371 NT_031780 NT_016599 NT_034704 NT_031781 NT_006302 NT_034705
NT_022755 NT_016354 NT_022846 NT_022819 NT_006124 NT_034706 NT_006127 NT_016606
NT_006258 NT_006129 NT_022801 NT_006171 NT_022776 NT_006198 NT_006257 NT_006118
NT_022792 NT_034707 NT_022841 NT_033070 NT_022800


  NT_016354
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016354AC0224891241964963NIB13754475.001 AC022489.7
S/G/Y/R/B/O NT_016354AC0224891242854853WI-70354476.001 AC022489.7
S/G/Y/R/B/O NT_016354AC1081661243232353      
S/G/Y/R/B/O NT_016354AC0535451245203293D4S4304477.001 AC053545.5
S/G/Y/R/B/O NT_016354AC0535451245688623WI-44024478.001 AC018425.3, AC053545.5
S/G/Y/R/B/O NT_016354AC0936911245980443      
S/G/Y/R/B/O NT_016354AC0212051247822163D4S1944479.001 AC021205.6
S/G/Y/R/B/O NT_016354AC1093571248595043WI-720417177.003 AC004584.1
S/G/Y/R/B/O NT_016354AC0974921249318983      
S/G/Y/R/B/O NT_016354AC0264021250727883      
S/G/Y/R/B/O NT_016354AC0938211253022373CHLC.ATA26F084480.001 AC025511.2, AC093821.3
S/G/Y/R/B/O NT_016354AC0925431253708983      
S/G/Y/R/B/O NT_016354AC0967321254288233      
S/G/Y/R/B/O NT_016354AC0937671256116343      
S/G/Y/R/B/O NT_016354AC1080751257591393      
S/G/Y/R/B/O NT_016354AC1070611259249303      
S/G/Y/R/B/O NT_016354AC1211541260334711      
S/G/Y/R/B/O NT_016354AC0686941260751001      
S/G/Y/R/B/O NT_016354AC0210071261287601      
S/G/Y/R/B/O NT_016354AC0974741262519833WI-43284481.001 AC021007.3, AC097474.3
S/G/Y/R/B/O NT_016354AC0974741262819263AFM165YC74482.001 AC021007.3, AC097474.3
S/G/Y/R/B/O NT_016354AC0974741263574143D4S29754483.001 AC097474.3
S/G/Y/R/B/O NT_016354AC1106181263627033      
S/G/Y/R/B/O NT_016354AC1054211264347993      
S/G/Y/R/B/O NT_016354AC0974721265955913      
S/G/Y/R/B/O NT_016354AC0938251267400673      
S/G/Y/R/B/O NT_016354AC0798561269917253WI-56244484.001 AC079856.7
S/G/Y/R/B/O NT_016354AC1081521270407983      
S/G/Y/R/B/O NT_016354AC0798351270490733      
S/G/Y/R/B/O NT_016354AC0988651272121203      
S/G/Y/R/B/O NT_016354AC0926291272644683      
S/G/Y/R/B/O NT_016354AC0935891274111413      
S/G/Y/R/B/O NT_016354AC1059191275369043      
S/G/Y/R/B/O NT_016354AC1046641276726303      
S/G/Y/R/B/O NT_016354AC1084961278267773      
S/G/Y/R/B/O NT_016354AC1057581278320803      
S/G/Y/R/B/O NT_016354AC0231191279760703WI-48364485.001 AC023119.8
S/G/Y/R/B/O NT_016354AC0938961281269233      
S/G/Y/R/B/O NT_016354AC0967601282825433      
S/G/Y/R/B/O NT_016354AC0975281283800543      
S/G/Y/R/B/O NT_016354AC1040871285484663      
S/G/Y/R/B/O NT_016354AC0926591285567073      
S/G/Y/R/B/O NT_016354AC1147421287152383      
S/G/Y/R/B/O NT_016354AC0973781287172323      
S/G/Y/R/B/O NT_016354AC0967731288726493      
S/G/Y/R/B/O NT_016354AC0937721291214593D4S16154486.001 AC015773.4, AC093772.2, AC124007.3
S/G/Y/R/B/O NT_016354AC0937721291678203AFMA239ZG54487.001 AC015773.4, AC015822.3, AC093772.2, AC124007.3
S/G/Y/R/B/O NT_016354AC1240071291805421      
S/G/Y/R/B/O NT_016354AC1081481292041913      
S/G/Y/R/B/O NT_016354AC1053871292972393      


  NT_016354 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016354AC0974621293232873      
S/G/Y/R/B/O NT_016354AC1107971295022603      
S/G/Y/R/B/O NT_016354AC0935911295324563      
S/G/Y/R/B/O NT_016354AC1070531296892143      
S/G/Y/R/B/O NT_016354AC0993401297442713      
S/G/Y/R/B/O NT_016354AC1080451299072291      
S/G/Y/R/B/O NT_016354AC1240301299823201      
S/G/Y/R/B/O NT_016354AC1147351299975673      
S/G/Y/R/B/O NT_016354AC0968981300484753      
S/G/Y/R/B/O NT_016354AC1080621302516763D4S29384495.001 AC024911.1, AC034197.3, AC108062.3
S/G/Y/R/B/O NT_016354AC1080621303188993CHLC.GATA12B034488.001 AC024911.1, AC024944.3, AC108062.3
S/G/Y/R/B/O NT_016354AC1106091303768983      
S/G/Y/R/B/O NT_016354AC0788501304198223      
S/G/Y/R/B/O NT_016354AC1080241305980161      
S/G/Y/R/B/O NT_016354AC0937831307207793      
S/G/Y/R/B/O NT_016354AC0938261310098533WI-66704493.001 AC027132.4, AC060779.3, AC093826.2, AL162593.12, AL353686.9
S/G/Y/R/B/O NT_016354AC1054171310731153CHLC.GATA62F084492.001 AC060779.3, AC105417.1, AL162593.12, AL353686.9
S/G/Y/R/B/O NT_016354AC0826501310887593      
S/G/Y/R/B/O NT_016354AC0164071312561671      
S/G/Y/R/B/O NT_016354AC0950481313148093      
S/G/Y/R/B/O NT_016354AC0967551316115803WI-100424490.001 AC087307.3, AC096755.2
S/G/Y/R/B/O NT_016354AC0798571316511043WI-98944489.001 AC079857.5, AC087307.3
S/G/Y/R/B/O NT_016354AC0798571317254203CHLC.GATA10A124491.001 AC079857.5
S/G/Y/R/B/O NT_016354AC0924861318031313      
S/G/Y/R/B/O NT_016354AC0974811318178123      
S/G/Y/R/B/O NT_016354AC0938821319193783      
S/G/Y/R/B/O NT_016354AC1147841320897243      
S/G/Y/R/B/O NT_016354AC0965751321374153      
S/G/Y/R/B/O NT_016354AC0925401323158383      
S/G/Y/R/B/O NT_016354AC1098201324476393      
S/G/Y/R/B/O NT_016354AC0967311324908153      
S/G/Y/R/B/O NT_016354AC0938311325800183      
S/G/Y/R/B/O NT_016354AC0939021327601343      
S/G/Y/R/B/O NT_016354AC0255541329377253      
S/G/Y/R/B/O NT_016354AC0212031330247433      
S/G/Y/R/B/O NT_016354AC1108031331650611      
S/G/Y/R/B/O NT_016354AC0341761331877003      
S/G/Y/R/B/O NT_016354AC1053921333808003      
S/G/Y/R/B/O NT_016354AC1054241334028233      
S/G/Y/R/B/O NT_016354AC1073931335852221      
S/G/Y/R/B/O NT_016354AC1048211337040943      
S/G/Y/R/B/O NT_016354AC0967111338384343AFMB296ZB94496.001 AC032021.2, AC044886.2, AC096711.2
S/G/Y/R/B/O NT_016354AC0939161339372683WI-98214497.001 AC093916.2
S/G/Y/R/B/O NT_016354AC0939161340537903D4S4294498.001 AC093916.2
S/G/Y/R/B/O NT_016354AC0988661340976423      
S/G/Y/R/B/O NT_016354AC1147401342399323      
S/G/Y/R/B/O NT_016354AC1147411342709633      
S/G/Y/R/B/O NT_016354AC0988581343885383      
S/G/Y/R/B/O NT_016354AC1100731345589573      
S/G/Y/R/B/O NT_016354AC1156221346870453      


  NT_016354 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_016354AC1107511348495903      
S/G/Y/R/B/O NT_016354AC1053831348997373      
S/G/Y/R/B/O NT_016354 - CHLC.GATA61A084494.000