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  Chromosome 4 - YAC Map - Single Contig
 

Chromosome 4 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_006111 NT_022865 NT_006081 NT_029956 NT_006051 NT_034692 NT_033060 NT_006362
NT_006307 NT_006350 NT_006342 NT_029958 NT_034756 NT_016407 NT_034693 NT_006344
NT_034748 NT_006316 NT_023052 NT_006189 NT_022794 NT_006305 NT_034694 NT_022751
NT_016297 NT_022782 NT_006238 NT_022853 NT_034695 NT_034696 NT_022778 NT_022836
NT_034697 NT_030640 NT_006216 NT_034698 NT_034699 NT_022760 NT_006109 NT_006328
NT_034700 NT_006204 NT_034701 NT_006397 NT_006383 NT_034702 NT_034703 NT_006365
NT_028147 NT_006371 NT_031780 NT_016599 NT_034704 NT_031781 NT_006302 NT_034705
NT_022755 NT_016354 NT_022846 NT_022819 NT_006124 NT_034706 NT_006127 NT_016606
NT_006258 NT_006129 NT_022801 NT_006171 NT_022776 NT_006198 NT_006257 NT_006118
NT_022792 NT_034707 NT_022841 NT_033070 NT_022800


  NT_006397
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006397AC109925960040181WI-29004381.001 AC012412.3, AC027403.1, AC027403.1, AC109925.3
S/G/Y/R/B/O NT_006397AC093634956557841      
S/G/Y/R/B/O NT_006397AC108067956991073      
S/G/Y/R/B/O NT_006397AC093778958199323      
S/G/Y/R/B/O NT_006397AC004061960913963      
S/G/Y/R/B/O NT_006397AC092609962301973CHLC.GGAA18A064382.001 AC083952.2, AC092609.2, AP001950.2
S/G/Y/R/B/O NT_006397AC105395963285443      
S/G/Y/R/B/O NT_006397AC022570964888251      
S/G/Y/R/B/O NT_006397AC023553965006081      
S/G/Y/R/B/O NT_006397AC097656965302853      
S/G/Y/R/B/O NT_006397AC023177965859691      
S/G/Y/R/B/O NT_006397AC093832967386503      
S/G/Y/R/B/O NT_006397AC093828969258823      
S/G/Y/R/B/O NT_006397AC095054970699543      
S/G/Y/R/B/O NT_006397AC093721972114933D4S15594384.001 AC018969.3, AC093721.3
S/G/Y/R/B/O NT_006397AC096661972920793D4S15784385.001 AC018969.3, AC096661.1, AP001945.2
S/G/Y/R/B/O NT_006397AC093776974610643CHLC.GATA53B074386.001 AC016078.3, AC024420.1, AC093776.3, AP002742.2
S/G/Y/R/B/O NT_006397AC093776974610923CHLC.GATA25A014383.001 AC016078.3, AC024420.1, AC093776.3, AP002742.2
S/G/Y/R/B/O NT_006397AC108464975263643      
S/G/Y/R/B/O NT_006397AC104816975577623      
S/G/Y/R/B/O NT_006397AC113613977361363WI-32734387.002 AC107389.2, AC113613.4
S/G/Y/R/B/O NT_006397AC079616978300683D4S15604389.002 AC079616.4, AC107389.2
S/G/Y/R/B/O NT_006397AC079616978914553WI-40564388.001 AC015899.3, AC015899.3, AC079616.4, AP002821.1
S/G/Y/R/B/O NT_006397AC096585979734863      
S/G/Y/R/B/O NT_006397AC004544980131193      
S/G/Y/R/B/O NT_006397AC079925981797633      
S/G/Y/R/B/O NT_006397AC108515982624283      
S/G/Y/R/B/O NT_006397AC021878984998173CHLC.GATA6D11.4074391.001 AC021878.4
S/G/Y/R/B/O NT_006397AC108217985101053      
S/G/Y/R/B/O NT_006397AC034154986193063      
S/G/Y/R/B/O NT_006397AP002333988278691      
S/G/Y/R/B/O NT_006397AC020652988410291      
S/G/Y/R/B/O NT_006397AC018884989223733      
S/G/Y/R/B/O NT_006397AC073855992171373WI-18704392.001 AC009826.3, AC073855.5, AP001866.3
S/G/Y/R/B/O NT_006397AC019077992796973      
S/G/Y/R/B/O NT_006397AC078961994681343      
S/G/Y/R/B/O NT_006397AC058823995444713WI-24094393.001 AC058823.4, AP001861.1
S/G/Y/R/B/O NT_006397AC058823996373243WI-68694394.001 AC058823.4, AC108159.5
S/G/Y/R/B/O NT_006397AC108159996440941      
S/G/Y/R/B/O NT_006397AC074120996806533CHLC.GATA2F11.9284395.001 AC074120.9, AC092434.1
S/G/Y/R/B/O NT_006397AC114811999034693D4S29864398.001 AC114811.3
S/G/Y/R/B/O NT_006397AC0938361000386413WI-101724396.001 AC093836.3
S/G/Y/R/B/O NT_006397AC0191311002282743WI-79804397.001 AC019131.7, AP002028.1
S/G/Y/R/B/O NT_006397AP0020261003249673CHLC.GATA82D124399.001 AP002026.1
S/G/Y/R/B/O NT_006397AC0975301004376983      
S/G/Y/R/B/O NT_006397AP0019601005575663      
S/G/Y/R/B/O NT_006397AC0839021006904593      
S/G/Y/R/B/O NT_006397AC0844211008405073      
S/G/Y/R/B/O NT_006397AC1080611009324813      
S/G/Y/R/B/O NT_006397AP0019621009540883      


  NT_006397 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006397AC0974601010661123      
S/G/Y/R/B/O NT_006397AC1100891012230083      
S/G/Y/R/B/O NT_006397AC1211571012750573      
S/G/Y/R/B/O NT_006397AP0019611013096803      
S/G/Y/R/B/O NT_006397AC1149131013801023      
S/G/Y/R/B/O NT_006397AC1057631015190133D4S4214401.001 AC105763.5
S/G/Y/R/B/O NT_006397AC0974591015406893      
S/G/Y/R/B/O NT_006397AC1156231017002083      
S/G/Y/R/B/O NT_006397AC1161741018028423D4S29664402.001 AC116174.3
S/G/Y/R/B/O NT_006397AC0341501018433063      
S/G/Y/R/B/O NT_006397 - SGC354944400.001 Z82244.1