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  Chromosome 4 - YAC Map - Single Contig
 

Chromosome 4 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_006111 NT_022865 NT_006081 NT_029956 NT_006051 NT_034692 NT_033060 NT_006362
NT_006307 NT_006350 NT_006342 NT_029958 NT_034756 NT_016407 NT_034693 NT_006344
NT_034748 NT_006316 NT_023052 NT_006189 NT_022794 NT_006305 NT_034694 NT_022751
NT_016297 NT_022782 NT_006238 NT_022853 NT_034695 NT_034696 NT_022778 NT_022836
NT_034697 NT_030640 NT_006216 NT_034698 NT_034699 NT_022760 NT_006109 NT_006328
NT_034700 NT_006204 NT_034701 NT_006397 NT_006383 NT_034702 NT_034703 NT_006365
NT_028147 NT_006371 NT_031780 NT_016599 NT_034704 NT_031781 NT_006302 NT_034705
NT_022755 NT_016354 NT_022846 NT_022819 NT_006124 NT_034706 NT_006127 NT_016606
NT_006258 NT_006129 NT_022801 NT_006171 NT_022776 NT_006198 NT_006257 NT_006118
NT_022792 NT_034707 NT_022841 NT_033070 NT_022800


  NT_006316
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006316AC110296213706793D4S1593476.001 AC009568.4, AC110296.3
S/G/Y/R/B/O NT_006316AC110296213876463D4S3020475.001 AC009568.4, AC110296.3
S/G/Y/R/B/O NT_006316AC110296214100703D4S1562477.001 AC009568.4, AC110296.3
S/G/Y/R/B/O NT_006316AC110296214364353D4S2905478.001 AC068846.1
S/G/Y/R/B/O NT_006316AC108147214909393      
S/G/Y/R/B/O NT_006316AC110612215948683D4S3017480.001 AC021536.3, AC110612.3
S/G/Y/R/B/O NT_006316AC110612216294263D4S2994479.001 AC021536.3, AC110612.3
S/G/Y/R/B/O NT_006316AC110612216462353WI-6508482.001 AC021536.3, AC110612.3
S/G/Y/R/B/O NT_006316AC096576217488943WI-1041481.001 AC096576.3
S/G/Y/R/B/O NT_006316AC107462218210073      
S/G/Y/R/B/O NT_006316AC113606220010831      
S/G/Y/R/B/O NT_006316AC110616221044393      
S/G/Y/R/B/O NT_006316AC096719221850953      
S/G/Y/R/B/O NT_006316AC108214223414933      
S/G/Y/R/B/O NT_006316AC093735224117013      
S/G/Y/R/B/O NT_006316AC093814225210903      
S/G/Y/R/B/O NT_006316AC098583226822913      
S/G/Y/R/B/O NT_006316AC093917228543093WI-716520132.002 AL031281.6
S/G/Y/R/B/O NT_006316AC093917229952163D4S336483.001 AC016782.5, AC093917.3
S/G/Y/R/B/O NT_006316AC016782230133591      
S/G/Y/R/B/O NT_006316AC097512231151243WI-29611041.001 AC097512.2
S/G/Y/R/B/O NT_006316AC097512231882613D4S2933485.001 AC097512.2
S/G/Y/R/B/O NT_006316AC114912232039331      
S/G/Y/R/B/O NT_006316AC092440233738313D4S972486.001 AC006295.8, AC016504.2, AC092440.5
S/G/Y/R/B/O NT_006316AC092440234397103D4S1265487.001 AC006295.8, AC092440.5
S/G/Y/R/B/O NT_006316AC092440234615383D4S326488.001 AC006295.8, AC092440.5
S/G/Y/R/B/O NT_006316AC098676234759233      
S/G/Y/R/B/O NT_006316AC006052234958493      
S/G/Y/R/B/O NT_006316AC093607236745153D4S616491.001 AC044905.2, AC093607.3
S/G/Y/R/B/O NT_006316AC093607237605223WI-5645489.001 AC044905.2, AC093607.3
S/G/Y/R/B/O NT_006316AC093607237822233D4S425490.001 AC093607.3
S/G/Y/R/B/O NT_006316AC097508238019353      
S/G/Y/R/B/O NT_006316AC092834240235613D4S3013492.001 AC092834.3
S/G/Y/R/B/O NT_006316AC108071240521663      
S/G/Y/R/B/O NT_006316AC006229242195513AFMA071ZE9493.001 AC126361.1
S/G/Y/R/B/O NT_006316AC108076243613013D4S404494.001 AC108076.2
S/G/Y/R/B/O NT_006316AC092846243980043D4S1590495.001 AC005769.10, AC027482.2, AC092846.5
S/G/Y/R/B/O NT_006316AC092846245398043D4S860497.001 AC005769.10, AC027482.2, AC092846.5
S/G/Y/R/B/O NT_006316AC108028245748443      
S/G/Y/R/B/O NT_006316AC115110246093871WI-3401498.001 AC115110.3
S/G/Y/R/B/O NT_006316AC114777247644843      
S/G/Y/R/B/O NT_006316AC006390248709823D4S10094100.001 AC006390.8
S/G/Y/R/B/O NT_006316AC006390248763643D4S1551496.001 AC006390.8
S/G/Y/R/B/O NT_006316AC006390249078193D4S1024499.001 AC006390.8, AC073829.9
S/G/Y/R/B/O NT_006316AC006390249658383D4S29114101.001 AC006390.8
S/G/Y/R/B/O NT_006316AC116422250031673D4S30524102.001 AC073829.9, AC116422.1
S/G/Y/R/B/O NT_006316AC113614251342903D4S29484103.001 AC007073.2, AC113614.4
S/G/Y/R/B/O NT_006316AC007073252135173D4S5174104.001 AC007073.2
S/G/Y/R/B/O NT_006316AC104662252811843      
S/G/Y/R/B/O NT_006316AC108218254343183D4S29704105.001 AC044900.2, AC058821.2, AC073899.1, AC108218.3, AC110812.1


  NT_006316 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006316AC058821255951481WI-65394106.001 AC021248.3, AC058821.2, AC110812.1
S/G/Y/R/B/O NT_006316AC105290256952693D4S30444108.001 AC105290.3
S/G/Y/R/B/O NT_006316AC092436257299953D4S30224107.001 AC006393.6, AC092436.5
S/G/Y/R/B/O NT_006316AC020706259116071      
S/G/Y/R/B/O NT_006316AC093660260903121      
S/G/Y/R/B/O NT_006316AC097714261409283      
S/G/Y/R/B/O NT_006316AC111003263714131D4S8634109.001 AC110779.1, AC111003.2
S/G/Y/R/B/O NT_006316AC097109264465683AFMB355YA54110.001 AC097109.4, AC111003.2
S/G/Y/R/B/O NT_006316AC093637266327723WI-78224112.001 AC006391.7, AC016175.2, AC084735.1, AC092446.2, AC093637.5
S/G/Y/R/B/O NT_006316AC093807266748003AFMA283YH54111.001 AC006391.7
S/G/Y/R/B/O NT_006316AC107390268218513      
S/G/Y/R/B/O NT_006316AC106047269345493      
S/G/Y/R/B/O NT_006316AC006928271534673WI-40864113.001 AC006928.15
S/G/Y/R/B/O NT_006316AC111195272759393      
S/G/Y/R/B/O NT_006316AC024132272892653      
S/G/Y/R/B/O NT_006316AC006568276233513D4S16094116.001 AC006568.7
S/G/Y/R/B/O NT_006316AC093845276255223      
S/G/Y/R/B/O NT_006316AC097380277619873D4S3914114.001 AC020628.16, AC097380.2
S/G/Y/R/B/O NT_006316AC093854278379873D4S3134115.001 AC093854.2
S/G/Y/R/B/O NT_006316AC093753279565623      
S/G/Y/R/B/O NT_006316AC007106280609453      
S/G/Y/R/B/O NT_006316AC098863282311343      
S/G/Y/R/B/O NT_006316AC108012283183953      
S/G/Y/R/B/O NT_006316AC093791284940693WI-108744118.001 AC093791.3
S/G/Y/R/B/O NT_006316AC093791285023893D4S5774117.001 AC093791.3
S/G/Y/R/B/O NT_006316AC109588285291623      
S/G/Y/R/B/O NT_006316AC097480285866033      
S/G/Y/R/B/O NT_006316AC091602288599133D4S3384119.001 AC091602.6
S/G/Y/R/B/O NT_006316AC096566288892623      
S/G/Y/R/B/O NT_006316AC111004289891933      
S/G/Y/R/B/O NT_006316 - WI-2960484.001 AC013772.3, AC013803.3, AL160391.13