Home    Genome Browser    BLAT Search    Help
  Chromosome 4 - YAC Map - Single Contig
 

Chromosome 4 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_006111 NT_022865 NT_006081 NT_029956 NT_006051 NT_034692 NT_033060 NT_006362
NT_006307 NT_006350 NT_006342 NT_029958 NT_034756 NT_016407 NT_034693 NT_006344
NT_034748 NT_006316 NT_023052 NT_006189 NT_022794 NT_006305 NT_034694 NT_022751
NT_016297 NT_022782 NT_006238 NT_022853 NT_034695 NT_034696 NT_022778 NT_022836
NT_034697 NT_030640 NT_006216 NT_034698 NT_034699 NT_022760 NT_006109 NT_006328
NT_034700 NT_006204 NT_034701 NT_006397 NT_006383 NT_034702 NT_034703 NT_006365
NT_028147 NT_006371 NT_031780 NT_016599 NT_034704 NT_031781 NT_006302 NT_034705
NT_022755 NT_016354 NT_022846 NT_022819 NT_006124 NT_034706 NT_006127 NT_016606
NT_006258 NT_006129 NT_022801 NT_006171 NT_022776 NT_006198 NT_006257 NT_006118
NT_022792 NT_034707 NT_022841 NT_033070 NT_022800


  NT_006204
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006204AC104827872417923      
S/G/Y/R/B/O NT_006204AC096953874346273AFMA059XC94350.001 AC011658.5, AC096953.4
S/G/Y/R/B/O NT_006204AC110076876498383D4S24624349.001 AC109819.3, AC110076.4
S/G/Y/R/B/O NT_006204AC097657877589993CHLC.GATA62A114348.001 AC097657.3
S/G/Y/R/B/O NT_006204AC097657878261533WI-100414345.001 AC097657.3
S/G/Y/R/B/O NT_006204AC105413878651373WI-37704346.001 AC105413.3
S/G/Y/R/B/O NT_006204AC105413878933473WI-92974347.001 AC099847.1, AC105413.3
S/G/Y/R/B/O NT_006204AC079237879063093      
S/G/Y/R/B/O NT_006204AC093827879279273      
S/G/Y/R/B/O NT_006204AC093779881181903      
S/G/Y/R/B/O NT_006204AC092658881758533      
S/G/Y/R/B/O NT_006204AC108516883047863      
S/G/Y/R/B/O NT_006204AC112250884889883      
S/G/Y/R/B/O NT_006204AC093906885664633      
S/G/Y/R/B/O NT_006204AC093895886950963      
S/G/Y/R/B/O NT_006204AC108495888472573      
S/G/Y/R/B/O NT_006204AC093768888501133      
S/G/Y/R/B/O NT_006204AC087106890618371UTR-96694357.001 AC087106.1
S/G/Y/R/B/O NT_006204AC084732890979523WI-65594358.001 AC084732.1, AC087106.1
S/G/Y/R/B/O NT_006204AC097484892578333      
S/G/Y/R/B/O NT_006204AC108213893416723      
S/G/Y/R/B/O NT_006204AC107067894038663D4S29294363.001 AC107067.3
S/G/Y/R/B/O NT_006204AC083829894539573      
S/G/Y/R/B/O NT_006204AC098582896856973AFMB337WH94360.001 AC023521.3
S/G/Y/R/B/O NT_006204AC108065897744753WI-69024361.001 AC019279.5, AC093161.1, AC108065.3, AP001966.2
S/G/Y/R/B/O NT_006204AC108065897855133WI-79494362.001 AC019279.5, AC108065.3, AP001966.2
S/G/Y/R/B/O NT_006204AC021183898528183      
S/G/Y/R/B/O NT_006204AC079141899910503D4S24604359.001 AC079141.7
S/G/Y/R/B/O NT_006204AC079141900995703WI-11134356.001 AC055833.3, AC079141.7, AC104785.4
S/G/Y/R/B/O NT_006204AC104785901389281      
S/G/Y/R/B/O NT_006204AC105388902901223CHLC.GATA31H044364.001 AC105388.3, AP001940.1, AP002082.2
S/G/Y/R/B/O NT_006204AC093862903899383D4S24614365.001 AC021919.2, AC093862.3, AP001940.1
S/G/Y/R/B/O NT_006204AC093866905377343      
S/G/Y/R/B/O NT_006204AC097478908040523WI-78904366.001 AC011954.6, AC097478.2, AP001947.2
S/G/Y/R/B/O NT_006204AC108208908629823      
S/G/Y/R/B/O NT_006204AC093759908799043      
S/G/Y/R/B/O NT_006204AC105445910557113      
S/G/Y/R/B/O NT_006204AC108038911859823D4S15444367.001 AC108038.3, AP002083.2
S/G/Y/R/B/O NT_006204AC093781914091973WI-56394368.001 AC093781.2, AP001941.1
S/G/Y/R/B/O NT_006204AC098593914755303      
S/G/Y/R/B/O NT_006204AC097524915824673      
S/G/Y/R/B/O NT_006204AC093729917941573WI-54184369.001 AC093729.2, AP001948.2
S/G/Y/R/B/O NT_006204AC019188918406963      
S/G/Y/R/B/O NT_006204AC093793920465313      
S/G/Y/R/B/O NT_006204AC004054921479233      
S/G/Y/R/B/O NT_006204AC096897922581083      
S/G/Y/R/B/O NT_006204AC114787922691083      
S/G/Y/R/B/O NT_006204AC074124923358723D4S30064370.001 AC074124.4, AC084254.1, AP001942.1
S/G/Y/R/B/O NT_006204AC110796924691883      
S/G/Y/R/B/O NT_006204AC079301925960083D4S4144371.001 AC079301.6, AP001949.2


  NT_006204 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006204AC110774926237563      
S/G/Y/R/B/O NT_006204AC107049928572193WI-80534372.001 AC087607.1, AC093810.4, AC107049.6, AP001943.1
S/G/Y/R/B/O NT_006204AC093810928574753      
S/G/Y/R/B/O NT_006204AC093847930021463      
S/G/Y/R/B/O NT_006204AC093597931750723      
S/G/Y/R/B/O NT_006204AC097520933227843WI-52074374.001 AC097520.2
S/G/Y/R/B/O NT_006204AC112695933914123D4S30374373.001 AC112695.3
S/G/Y/R/B/O NT_006204AC115537934696223      
S/G/Y/R/B/O NT_006204AC093596936571103CHLC.GATA21G024375.002 AC018434.2, AC018575.3, AC092744.8, AC093596.3, AP001944.1
S/G/Y/R/B/O NT_006204AC022317936746833CHLC.GAAT1F094376.002 AP001944.1
S/G/Y/R/B/O NT_006204AC022317938003583WI-100214377.001 AC022317.8
S/G/Y/R/B/O NT_006204AC095059938433203      
S/G/Y/R/B/O NT_006204AC108158939509063      
S/G/Y/R/B/O NT_006204AC020699939592083      
S/G/Y/R/B/O NT_006204AC096769941441693      
S/G/Y/R/B/O NT_006204AC115111942129753      
S/G/Y/R/B/O NT_006204AC110800943246593      
S/G/Y/R/B/O NT_006204AC105452945356133WI-55804378.001 AC105452.3, AP002084.2
S/G/Y/R/B/O NT_006204AC105315945873793      
S/G/Y/R/B/O NT_006204AC093733946031953      
S/G/Y/R/B/O NT_006204AC104077948628673AFMA054WG14379.001 AC104077.2, AP001864.1
S/G/Y/R/B/O NT_006204AC087413948968123      
S/G/Y/R/B/O NT_006204AC104647949755133      
S/G/Y/R/B/O NT_006204AC098677951213973D4S15574380.001 AC022249.3, AC098677.2
S/G/Y/R/B/O NT_006204AC096746952373753      
S/G/Y/R/B/O NT_006204 - WI-63364351.001 AC012208.3, AC016295.3, AC104059.5, AP001967.1
S/G/Y/R/B/O NT_006204 - WI-79134352.001 AC012208.3, AC016295.3, AC104059.5, AP001967.1
S/G/Y/R/B/O NT_006204 - WI-11654353.001 AC018983.4, AC097108.4
S/G/Y/R/B/O NT_006204 - WI-9374354.001 AC018983.4, AC097108.4
S/G/Y/R/B/O NT_006204 - D4S15344355.001 AC019036.3