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Chromosome 3 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005883
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005883AC0156961958217851        
S/G/Y/R/B/O NT_005883AC0238951958303921        
S/G/Y/R/B/O NT_005883AC0192341975495811GATA61H05  3213.641 AC019234
S/G/Y/R/B/O NT_005883AC0677181958434651        
S/G/Y/R/B/O NT_005883AC0925501958840501        
S/G/Y/R/B/O NT_005883AC0119261960133651        
S/G/Y/R/B/O NT_005883AC0686451960219163        
S/G/Y/R/B/O NT_005883AC0733651962663313UT604  3214.451 AC073365
S/G/Y/R/B/O NT_005883AC0996601962854331        
S/G/Y/R/B/O NT_005883AC0734061962956931        
S/G/Y/R/B/O NT_005883AC0694091963366691        
S/G/Y/R/B/O NT_005883AC0169661964333283UT441  3209.411AC069409, AC069409
S/G/Y/R/B/O NT_005883AC0639391964549633AFM207YD83216.003210.091AC069409, AC073406, AC099660, AC069409, AC073406, AC099660
S/G/Y/R/B/O NT_005883AC0800061966201003        
S/G/Y/R/B/O NT_005883AC0095201968076563AFM260YB13218.303212.611 AC009520, AC073963
S/G/Y/R/B/O NT_005883AC0082491969611853AFM198YA33218.303212.611 AC008249
S/G/Y/R/B/O NT_005883AC0082491969961503AFM283WC53218.303212.611AC108747, AC008249, AC108747
S/G/Y/R/B/O NT_005883AC1087471970686251        
S/G/Y/R/B/O NT_005883AC0798631972590431GGAA22B10  3214.451 AC079863
S/G/Y/R/B/O NT_005883AC0929521972635853        
S/G/Y/R/B/O NT_005883AC1129121974298191        
S/G/Y/R/B/O NT_005883AC0410341974800181        
S/G/Y/R/B/O NT_005883AC0266651976267481        
S/G/Y/R/B/O NT_005883 - GATA83E04  3214.450AC079863, AC079863