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  Chromosome 3 - Genetic Maps - Single Contig
 

Chromosome 3 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005927
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005927AC024149419021AFM268WG9367.90370.612AC021470, AC021470, AC024149
S/G/Y/R/B/O NT_005927AC0241561979911        
S/G/Y/R/B/O NT_005927AC0233532037921        
S/G/Y/R/B/O NT_005927AC0188272095941        
S/G/Y/R/B/O NT_005927AC0220102666481        
S/G/Y/R/B/O NT_005927AC0341895088951        
S/G/Y/R/B/O NT_005927AC0261715164101        
S/G/Y/R/B/O NT_005927AC0665955366673        
S/G/Y/R/B/O NT_005927AC02618772199033PTEL25  31.321 AC018810, AC026178, AC026187, AC055763, AC087087
S/G/Y/R/B/O NT_005927AC0870918339153        
S/G/Y/R/B/O NT_005927AC0116099761613AFMA101XG52217.402210.431 AC011609, AC021997
S/G/Y/R/B/O NT_005927AC08742810088763        
S/G/Y/R/B/O NT_005927AC08743110673183        
S/G/Y/R/B/O NT_005927AC09004412640573        
S/G/Y/R/B/O NT_005927AC08743015017323GATA22G12  35.541 AC087430
S/G/Y/R/B/O NT_005927AC08743015299243UT1360  35.541 AC087430
S/G/Y/R/B/O NT_005927AC02712315983453        
S/G/Y/R/B/O NT_005927AC03419218154643AFM238WB1231.4037.121 AC026206, AC034196
S/G/Y/R/B/O NT_005927AC02621419138073AFM122XB630.0036.961 AC022011, AC026206
S/G/Y/R/B/O NT_005927AC02621419921573GATA22F08  37.381 AC018833, AC022011, AC022918, AC026182, AC026214, AC087086, AC087092
S/G/Y/R/B/O NT_005927AC09004320533573        
S/G/Y/R/B/O NT_005927AC09004222251073        
S/G/Y/R/B/O NT_005927AC01881425039493AFM217XD232.5038.312 AC018497, AC018814, AC020753, AC024216
S/G/Y/R/B/O NT_005927AC08743225165983        
S/G/Y/R/B/O NT_005927AC08742726056063        
S/G/Y/R/B/O NT_005927AC02405728336553AFMA064WH933.1038.861 AC022376, AC024057, AC087187
S/G/Y/R/B/O NT_005927AC02688228578393        
S/G/Y/R/B/O NT_005927AC02200829609783        
S/G/Y/R/B/O NT_005927AC01884231660553AFMB296ZF534.90310.701 AC018842
S/G/Y/R/B/O NT_005927AC06660832325523        
S/G/Y/R/B/O NT_005927AC08709433535483        
S/G/Y/R/B/O NT_005927AC02200234656773        
S/G/Y/R/B/O NT_005927AC02406037620213GATA88H04  314.461AC068314, AC020751, AC023812, AC024060, AC046132, AC068314
S/G/Y/R/B/O NT_005927AC06831437650863        
S/G/Y/R/B/O NT_005927AC02618838328403        
S/G/Y/R/B/O NT_005927AC03419539647753AFM351WC138.70314.461 AC018492, AC023478, AC034195
S/G/Y/R/B/O NT_005927AC02415840484123        
S/G/Y/R/B/O NT_005927AC02348441978533        
S/G/Y/R/B/O NT_005927AC02416743703003        
S/G/Y/R/B/O NT_005927AC02348045144593AFM217XD6312.90318.971 AC018503, AC023480, AC026189, AC069264
S/G/Y/R/B/O NT_005927AC02348045308343AFMA047ZD5312.80318.971 AC018503, AC023480, AC026189, AC066594, AC069264
S/G/Y/R/B/O NT_005927AC01882245881383        
S/G/Y/R/B/O NT_005927AC02348347075813        
S/G/Y/R/B/O NT_005927AC03419148205363        
S/G/Y/R/B/O NT_005927AC02416848859113        
S/G/Y/R/B/O NT_005927AC09094450534613        
S/G/Y/R/B/O NT_005927AC06924851435193        
S/G/Y/R/B/O NT_005927AC01881652548673        
S/G/Y/R/B/O NT_005927AC09095554218933        
S/G/Y/R/B/O NT_005927AC02199956163223        


  NT_005927 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005927AC02620256715153        
S/G/Y/R/B/O NT_005927AC09084258386933        
S/G/Y/R/B/O NT_005927AC09094059924493        
S/G/Y/R/B/O NT_005927AC09093861409243        
S/G/Y/R/B/O NT_005927AC09106962876563        
S/G/Y/R/B/O NT_005927AC08785764001973        
S/G/Y/R/B/O NT_005927AC06659065142213        
S/G/Y/R/B/O NT_005927AC02711965946573        
S/G/Y/R/B/O NT_005927AC02616768768933UT440  318.381 AC012041, AC020755, AC024159, AC026167, AC026197, AC026205
S/G/Y/R/B/O NT_005927AC02416269243873        
S/G/Y/R/B/O NT_005927AC02592070862583        
S/G/Y/R/B/O NT_005927AC06927771272943        
S/G/Y/R/B/O NT_005927AC02348573848013AFM234TF4316.50322.331AC066606, AC011327, AC018493, AC018840, AC023485, AC066584, AC066606, AC067736
S/G/Y/R/B/O NT_005927AC06660673869663        
S/G/Y/R/B/O NT_005927AC02619975305673        
S/G/Y/R/B/O NT_005927AC06658576900933        
S/G/Y/R/B/O NT_005927AC03419477542453        
S/G/Y/R/B/O NT_005927AC02620479177093AFMA090ZD5318.90324.291 AC018504, AC026184, AC026204
S/G/Y/R/B/O NT_005927AC06831379656093        
S/G/Y/R/B/O NT_005927AC07769081247443        
S/G/Y/R/B/O NT_005927AC02417182508163        
S/G/Y/R/B/O NT_005927AC06927684450253        
S/G/Y/R/B/O NT_005927AC01883286513303AFMA303YB1319.00324.891AC087589, AC018832, AC024146, AC024164, AC024219, AC066598, AC087589
S/G/Y/R/B/O NT_005927AC08758987732503UT1201  327.721AC024156, AC024156, AC024164, AC024219, AC087589
S/G/Y/R/B/O NT_005927AC02348188092983        
S/G/Y/R/B/O NT_005927AC08785990503803GATA164B08  326.251AC034187, AC018355, AC025210, AC034187, AC087859
S/G/Y/R/B/O NT_005927AC03418790854363        
S/G/Y/R/B/O NT_005927AC06831293059693AFMC023XB5323.20329.191AC008151, AC008151
S/G/Y/R/B/O NT_005927AC00815193478543        
S/G/Y/R/B/O NT_005927AC03418694106363        
S/G/Y/R/B/O NT_005927AC03719395579233        
S/G/Y/R/B/O NT_005927AC06658397267723        
S/G/Y/R/B/O NT_005927AC02619198309873AFM295YC9324.10329.921AC018506, AC018506, AC018823, AC026191
S/G/Y/R/B/O NT_005927AC01850698912923        
S/G/Y/R/B/O NT_005927AC026194100181163        
S/G/Y/R/B/O NT_005927AC024163101132483        
S/G/Y/R/B/O NT_005927AC022382102017023        
S/G/Y/R/B/O NT_005927AC018809103427823        
S/G/Y/R/B/O NT_005927AC018808104863473        
S/G/Y/R/B/O NT_005927AC018828106681123        
S/G/Y/R/B/O NT_005927AC022384107352543        
S/G/Y/R/B/O NT_005927AC008116108380943        
S/G/Y/R/B/O NT_005927AC090841108548843        
S/G/Y/R/B/O NT_005927AC018839110196703AFMB040XE5325.50331.131AC018502, AC018499, AC018502, AC018839
S/G/Y/R/B/O NT_005927AC018502111171363AFMA337XG5325.50332.361 AC018499, AC018502
S/G/Y/R/B/O NT_005927AC018502111340423AFMA350XF5325.40331.131 AC011830, AC018499, AC018502
S/G/Y/R/B/O NT_005927AC018495113148653AFMA283YC5326.70332.361AC027128, AC013503, AC018495, AC018818, AC023471, AC025266, AC027128
S/G/Y/R/B/O NT_005927AC027128113558693        
S/G/Y/R/B/O NT_005927AC024910114547423        
S/G/Y/R/B/O NT_005927AC066580115889943        


  NT_005927 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005927AC083855116310513        
S/G/Y/R/B/O NT_005927AC020750117998703        
S/G/Y/R/B/O NT_005927AC026185119828143AFM079YG5330.40336.101 AC018811, AC026185
S/G/Y/R/B/O NT_005927AC022001121341763AFMA064VB5330.40336.651 AC012086
S/G/Y/R/B/O NT_005927AC090939121915263AFMB363XD5330.40336.101 AC090939
S/G/Y/R/B/O NT_005927AC090958123223063        
S/G/Y/R/B/O NT_005927AC022234124013933        
S/G/Y/R/B/O NT_005927AC026166125642503AFM036YB8330.90336.651 AC022875, AC026166
S/G/Y/R/B/O NT_005927AC091492126799193        
S/G/Y/R/B/O NT_005927AC093174128377823        
S/G/Y/R/B/O NT_005927AC090947128378123        
S/G/Y/R/B/O NT_005927AC018500130830863AFM087XF3331.40336.651AC026170, AC018500, AC026153, AC026170
S/G/Y/R/B/O NT_005927AC026170131161113        
S/G/Y/R/B/O NT_005927AC034198132902953AFM281WH1330.40336.101AC018836, AC018836, AC034198
S/G/Y/R/B/O NT_005927AC018836133884203        
S/G/Y/R/B/O NT_005927AC069271134712253AFMB035XF1331.40337.201 AC018843
S/G/Y/R/B/O NT_005927AC069271136379663GGAA4B09  337.201AC090885, AC017001, AC026218, AC069271, AC069526, AC090885, AC090956
S/G/Y/R/B/O NT_005927AC090885136651423        
S/G/Y/R/B/O NT_005927AC090942138283473        
S/G/Y/R/B/O NT_005927AC027124139730273        
S/G/Y/R/B/O NT_005927AC090951141192013UT442  341.561AC090005, AC018566, AC066597, AC068319, AC090005, AC090509, AC090951
S/G/Y/R/B/O NT_005927AC090005141468203        
S/G/Y/R/B/O NT_005927AC093611141698233AFMB029YF5333.50338.281AC090005, AC090005
S/G/Y/R/B/O NT_005927AC090646143445103GAAT3E04  338.541 AC090646, AC090884
S/G/Y/R/B/O NT_005927AC090646143915333AFMA353XA9331.40337.201AC024151, AC069462, AC024151, AC069462, AC090646, AC090884
S/G/Y/R/B/O NT_005927AC090646144072483AFM283VB5333.00338.831AC024151, AC069462, AC024151, AC069462, AC090646, AC090884
S/G/Y/R/B/O NT_005927AC069462144233543        
S/G/Y/R/B/O NT_005927AC090004145444823        
S/G/Y/R/B/O NT_005927AC093495146518823        
S/G/Y/R/B/O NT_005927AC093496148333443AFM205VA9333.50339.521AC090941, AC090941, AC093496
S/G/Y/R/B/O NT_005927AC090941149108743        
S/G/Y/R/B/O NT_005927AC090952151078983AFM198YB12335.80342.101 AC090952
S/G/Y/R/B/O NT_005927AC090957151810463        
S/G/Y/R/B/O NT_005927AC087591152937933        
S/G/Y/R/B/O NT_005927AC090937153869713        
S/G/Y/R/B/O NT_005927AC090954156430233UT637  118.643AC004924, AC034259, AC034259, AP003498, AC004924, AC026102, AC034259, AC034259, AC090949, AC090954, AP000867, AP003498
S/G/Y/R/B/O NT_005927AC087590158274933AFMB046ZB5335.70341.561AC027125, AC027125, AC069521
S/G/Y/R/B/O NT_005927AC027125158752563        
S/G/Y/R/B/O NT_005927AC027129160001113        
S/G/Y/R/B/O NT_005927AC090950162847043AFM197XG11335.80341.561AC078774, AC090945, AC078774, AC090945, AC090950
S/G/Y/R/B/O NT_005927AC090945163129333        
S/G/Y/R/B/O NT_005927AC090946164312113        
S/G/Y/R/B/O NT_005927AC087858166927263GATA25G06  342.101AC090953, AC087858, AC090953
S/G/Y/R/B/O NT_005927AC090953167127113        
S/G/Y/R/B/O NT_005927AC090948168210023        
S/G/Y/R/B/O NT_005927AC010727169878193AFMA176YE9335.80342.101 AC010727
S/G/Y/R/B/O NT_005927AC010139170333833        
S/G/Y/R/B/O NT_005927AC091493171945903        
S/G/Y/R/B/O NT_005927AC091291173149663AFMA037ZF5336.30342.101 AC091291, AC093488
S/G/Y/R/B/O NT_005927AC090943174395193        


  NT_005927 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005927AC091491174820003        
S/G/Y/R/B/O NT_005927AC090644176062553        
S/G/Y/R/B/O NT_005927AC090960177972343        
S/G/Y/R/B/O NT_005927AC078774179674031        
S/G/Y/R/B/O NT_005927AC018937180362811GATA81E09  2032.942AL034561, AC018937, AL034561
S/G/Y/R/B/O NT_005927AC024151180397751        
S/G/Y/R/B/O NT_005927AC078915180982321        
S/G/Y/R/B/O NT_005927 - AFMA083YE5336.80  0  
S/G/Y/R/B/O NT_005927 - GATA123C09  342.100AC091291, AC091291