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Chromosome 3 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005994
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005994AC0483481250700811        
S/G/Y/R/B/O NT_005994AC0108581250754711        
S/G/Y/R/B/O NT_005994AC0695711250775161        
S/G/Y/R/B/O NT_005994AF3898521250831013        
S/G/Y/R/B/O NT_005994AC0800961251150161        
S/G/Y/R/B/O NT_005994AC0788101252189251        
S/G/Y/R/B/O NT_005994AC0720311266191541AFMA072YA53141.103139.121AC080098, AC072031, AC080098
S/G/Y/R/B/O NT_005994AF3898511253828733AFMA183ZB13142.20  1AC055752, AC055752, AL357119
S/G/Y/R/B/O NT_005994AF3898511253828733AFMA183ZB1  3140.191AC055752, AC055752, AL357119
S/G/Y/R/B/O NT_005994AF3898511253837303AFMA191ZG53142.20  1AC055752, AC069571, AC055752, AC069571, AF389851
S/G/Y/R/B/O NT_005994AF3898511253837303AFMA191ZG5  3140.191AC055752, AC069571, AC055752, AC069571, AF389851
S/G/Y/R/B/O NT_005994AC0557521254239081AFM198YC13142.20  1AC069571, AC055752, AC069571
S/G/Y/R/B/O NT_005994AC0557521254239081AFM198YC1  3140.191AC069571, AC055752, AC069571
S/G/Y/R/B/O NT_005994AC0679981254861031        
S/G/Y/R/B/O NT_005994AC1086881254939963AFMB307YC53142.20  2AC026618, AC067998, AC092893, AC019289, AC026618, AC032043, AC067998, AC092893, AC108688, AL357119
S/G/Y/R/B/O NT_005994AC1086881254939963AFMB307YC5  3140.192AC026618, AC067998, AC092893, AC019289, AC026618, AC032043, AC067998, AC092893, AC108688, AL357119
S/G/Y/R/B/O NT_005994AC0266181256992581        
S/G/Y/R/B/O NT_005994AC0928931257009671        
S/G/Y/R/B/O NT_005994AC0929081258184963        
S/G/Y/R/B/O NT_005994AC0968611259918843AFMA210YE93140.003138.001AC092908, AC026506, AC092908, AC096861
S/G/Y/R/B/O NT_005994AC0837981260879253        
S/G/Y/R/B/O NT_005994AC0687541262879011        
S/G/Y/R/B/O NT_005994AC0267661263456351        
S/G/Y/R/B/O NT_005994AC0686301264086333        
S/G/Y/R/B/O NT_005994AC0800981266249113        
S/G/Y/R/B/O NT_005994AC0787941267317953        
S/G/Y/R/B/O NT_005994AC0111161268472921        
S/G/Y/R/B/O NT_005994AC0843001268472981        
S/G/Y/R/B/O NT_005994AC0720411268656453        
S/G/Y/R/B/O NT_005994AC0686331270449883AFM225YD63138.403136.321 AC016918
S/G/Y/R/B/O NT_005994AC0927431271371893        
S/G/Y/R/B/O NT_005994AC0263601272193223AFMA041WC13138.403136.321 AC026360, AC092772
S/G/Y/R/B/O NT_005994AC0263301274195163AFM308VE93138.403136.321 AC005827, AC026330
S/G/Y/R/B/O NT_005994AC0689841274688823        
S/G/Y/R/B/O NT_005994AC0070231275607033AFMB345ZE13140.003138.001 AC007023
S/G/Y/R/B/O NT_005994AC0120321276634023        
S/G/Y/R/B/O NT_005994AC0838001276911911        
S/G/Y/R/B/O NT_005994AC0929811278838663UT1641  3139.121 AC017034, AC092981
S/G/Y/R/B/O NT_005994 - AFM217XB43139.503137.440 AC074271
S/G/Y/R/B/O NT_005994 - ATA28H11  3138.000  
S/G/Y/R/B/O NT_005994 - AFM116XH23141.103139.120  
S/G/Y/R/B/O NT_005994 - AFMB353ZD13141.103139.121AC055749, AC055749