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  Chromosome 3 - Genetic Maps - Single Contig
 

Chromosome 3 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_025667
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025667AC0732881748578301        
S/G/Y/R/B/O NT_025667AC0688531748615411        
S/G/Y/R/B/O NT_025667AC0617081748656563        
S/G/Y/R/B/O NT_025667AC0929181750326353        
S/G/Y/R/B/O NT_025667AC0263151750622691        
S/G/Y/R/B/O NT_025667AC0266671751948681AFMB330XC13187.103180.801 AC026667, AC098564
S/G/Y/R/B/O NT_025667AC0263721751786701        
S/G/Y/R/B/O NT_025667AC0787931752498883        
S/G/Y/R/B/O NT_025667AC0929191754027173        
S/G/Y/R/B/O NT_025667AC0081341755018383        
S/G/Y/R/B/O NT_025667AC0789531756749563        
S/G/Y/R/B/O NT_025667AC0557141759767101AFM155XD63188.203181.871 AC016783, AC026312, AC026322, AC055714, AC073354, AC108712
S/G/Y/R/B/O NT_025667AC0557141759932841GATA28E03  3181.871 AC016783, AC026312, AC026322, AC055714, AC073354, AC108712
S/G/Y/R/B/O NT_025667AC0692591760483093GATA92B06  3181.871 AC026312
S/G/Y/R/B/O NT_025667AC0692591761072293AFMA082ZD93188.203181.871 AC026312
S/G/Y/R/B/O NT_025667AC1086681761591711UT672  3181.871 AC108668
S/G/Y/R/B/O NT_025667AC0929641763211571        
S/G/Y/R/B/O NT_025667AC0206491763405541        
S/G/Y/R/B/O NT_025667AC0255451763466491        
S/G/Y/R/B/O NT_025667AC0695231764750023AFM333YA53189.803183.471AC016938, AC016938, AC069523
S/G/Y/R/B/O NT_025667AC0169381765025091        
S/G/Y/R/B/O NT_025667AC0070511765091833        
S/G/Y/R/B/O NT_025667AC0079191766769933        
S/G/Y/R/B/O NT_025667AC1086671768131941AFM210VA73189.803183.471 AC108667
S/G/Y/R/B/O NT_025667AC0692371767597711        
S/G/Y/R/B/O NT_025667AC0929481768542703        
S/G/Y/R/B/O NT_025667AC0639331769988483        
S/G/Y/R/B/O NT_025667AC0687581771652283        
S/G/Y/R/B/O NT_025667AC0687591772066303        
S/G/Y/R/B/O NT_025667AC0184561774062823AFM164TC73191.403185.401 AC018456
S/G/Y/R/B/O NT_025667AC0120821775044323        
S/G/Y/R/B/O NT_025667AC0929351775480913        
S/G/Y/R/B/O NT_025667AC0929671775657661        
S/G/Y/R/B/O NT_025667AC0929231777808921AFM224ZB123193.003186.041AC024178, AC024178, AC092923
S/G/Y/R/B/O NT_025667AC0929231786352091GATA21A05  3185.402AC024178, AC110871, AC024178, AC092923, AC110871
S/G/Y/R/B/O NT_025667AC0241781778379861        
S/G/Y/R/B/O NT_025667AC0787951797124551AFMA044XE13188.203181.871 AC078795
S/G/Y/R/B/O NT_025667AC0692431779919223AFMB285ZC13183.103177.751 AC069243
S/G/Y/R/B/O NT_025667AC0168631780894181        
S/G/Y/R/B/O NT_025667AC0277051781032311        
S/G/Y/R/B/O NT_025667AC0098621781955001        
S/G/Y/R/B/O NT_025667AC0617101783455193AFM345TH53183.103177.751 AC011321, AC061710
S/G/Y/R/B/O NT_025667AC0183561784882623MFD182A  3180.801 AC018356, AC040973
S/G/Y/R/B/O NT_025667AC1129111785038203        
S/G/Y/R/B/O NT_025667AC0694141786032831        
S/G/Y/R/B/O NT_025667AC0929541787222301        
S/G/Y/R/B/O NT_025667AC0461391788886821        
S/G/Y/R/B/O NT_025667AC0074801788993211        
S/G/Y/R/B/O NT_025667AC0223321789259671        
S/G/Y/R/B/O NT_025667AC0789851790738033AFM179XH103186.403180.801 AC078985


  NT_025667 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025667AC0240991791088813        
S/G/Y/R/B/O NT_025667AC0692201791539403        
S/G/Y/R/B/O NT_025667AC0000541792221193        
S/G/Y/R/B/O NT_025667AL3914141792862303        
S/G/Y/R/B/O NT_025667AC0740331793073823        
S/G/Y/R/B/O NT_025667AC1143051793743051        
S/G/Y/R/B/O NT_025667AC0078491794551861        
S/G/Y/R/B/O NT_025667AC0788021795491531        
S/G/Y/R/B/O NT_025667AC0080401797249483        
S/G/Y/R/B/O NT_025667AC0238911799012011        
S/G/Y/R/B/O NT_025667AC0448561800339101        
S/G/Y/R/B/O NT_025667AC0080411803059343AFM224YA33187.003180.801 AC008041
S/G/Y/R/B/O NT_025667AC0080411803684883AFMA074YE13187.003180.801 AC008041