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  Chromosome 15 - RH Maps - Single Contig
 

Chromosome 15 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_010362 NT_024668 NT_033275 NT_033278 NT_033279 NT_010346 NT_010178 NT_026446
NT_030829 NT_024683 NT_010280 NT_024666 NT_010221 NT_010363 NT_024680 NT_033266
NT_010344 NT_030828 NT_010194 NT_010289 NT_010342 NT_010351 NT_024653 NT_010265
NT_033272 NT_010222 NT_010332 NT_033270 NT_010376 NT_010298 NT_010374 NT_024703
NT_024654 NT_029450 NT_019601 NT_010249 NT_033267 NT_010356 NT_010343 NT_024674
NT_033271 NT_024670 NT_033269 NT_033276 NT_033277 NT_010352 NT_024651 NT_010274


  NT_010265
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010265AC011939632626311RH4451915231.16    1AC084854, AC011939, AC084854
S/G/Y/R/B/O NT_010265AC011939632626631RH2625815231.16    1AC084854, AC011939, AC084854
S/G/Y/R/B/O NT_010265AC011939632919711RH5429215231.26  15223.201 AC011939
S/G/Y/R/B/O NT_010265AC011939633739491RH6749815231.26    1AC027220, AC011939, AC027220
S/G/Y/R/B/O NT_010265AC084854631470811          
S/G/Y/R/B/O NT_010265AC027736640451441RH8023615231.06    1AC084854, AC027736, AC084854
S/G/Y/R/B/O NT_010265AC027220634450841RH4520615231.16    1 AC027220
S/G/Y/R/B/O NT_010265AC027220634509181RH5412215231.16  15223.901 AC027220
S/G/Y/R/B/O NT_010265AC027220634509321RH4449615231.26    1 AC027220
S/G/Y/R/B/O NT_010265AC027220634516321RH5446615231.26  15223.201 AC027220
S/G/Y/R/B/O NT_010265AC027220634516921RH2581015231.16    1 AC027220
S/G/Y/R/B/O NT_010265AC027220634527591RH4694815231.16    1 AC027220
S/G/Y/R/B/O NT_010265AC011846635362402RH9299815231.26    1AC027220, AC011846, AC027220
S/G/Y/R/B/O NT_010265AC011846635831812RH4840415231.16    1AC105129, AC011846, AC105129
S/G/Y/R/B/O NT_010265AC011846635848672RH3951715236.22    1AC105129, AC011846, AC068507, AC105129
S/G/Y/R/B/O NT_010265AC011846635871262RH14898  152256.0015223.301AC105129, AC011846, AC105129
S/G/Y/R/B/O NT_010265AC011846635871972RH5426115231.16  15224.601AC105129, AC011846, AC105129
S/G/Y/R/B/O NT_010265AC011846635874602RH4480715231.16    1AC105129, AC011846, AC105129
S/G/Y/R/B/O NT_010265AC105129636461702RH6705115236.22    1 AC021040, AC068507, AC105129
S/G/Y/R/B/O NT_010265AC105129636477052WI-16786    15228.401 AC068507, AC105129
S/G/Y/R/B/O NT_010265AC105129636477052RH5417715230.25    1 AC068507, AC105129
S/G/Y/R/B/O NT_010265AC105129636477422RH2623215231.16    1 AC068507, AC105129
S/G/Y/R/B/O NT_010265AC105129636477602RH5418915231.26  15223.201 AC068507, AC105129
S/G/Y/R/B/O NT_010265AC105129636483662RH5420415231.26  15223.201 AC068507, AC105129
S/G/Y/R/B/O NT_010265AC105129636483902RH1732415231.16    1 AC068507, AC105129
S/G/Y/R/B/O NT_010265AC105129637010812WI-14920    15228.401AC015714, AC025997, AC015714, AC021040, AC025997, AC068507, AC105129
S/G/Y/R/B/O NT_010265AC105129637010812RH5444915230.25    1AC015714, AC025997, AC015714, AC021040, AC025997, AC068507, AC105129
S/G/Y/R/B/O NT_010265AC105129637027722RH10242815231.16    1AC015714, AC025997, AC015714, AC025997, AC068507, AC105129
S/G/Y/R/B/O NT_010265AC025997640148641RH5418315231.26  15223.201AC015714, AC068213, AC015714, AC025997, AC068213
S/G/Y/R/B/O NT_010265AC015714637309511          
S/G/Y/R/B/O NT_010265AC068213637311661          
S/G/Y/R/B/O NT_010265AC013553637727422RH9387015227.55    1 AC013553
S/G/Y/R/B/O NT_010265AC013553638106402RH4537215231.16    1AC068573, AC013553, AC068573
S/G/Y/R/B/O NT_010265AC013553638228162RH4838615227.55    1AC068573, AC013553, AC068573
S/G/Y/R/B/O NT_010265AC013553638229932RH3689415227.55    1AC068573, AC013553, AC068573
S/G/Y/R/B/O NT_010265AC013553638230382RH9816915226.54    1AC068573, AC013553, AC068573
S/G/Y/R/B/O NT_010265AC013553638230782RH990015226.54    1AC068573, AC013553, AC068573
S/G/Y/R/B/O NT_010265AC013553638641112RH10203015231.16    1AC068573, AC013553, AC068573
S/G/Y/R/B/O NT_010265AC013553638869922RH5426915231.16  15225.001AC068573, AC013553, AC068573
S/G/Y/R/B/O NT_010265AC013553639178632RH5405715231.16  15223.901AC068213, AC068573, AC013553, AC068213, AC068573
S/G/Y/R/B/O NT_010265AC013553639179662RH7877615231.16    1AC068213, AC068573, AC013553, AC068213, AC068573
S/G/Y/R/B/O NT_010265AC013553639179702RH3947815236.50    1AC068213, AC068573, AC013553, AC068213, AC068573
S/G/Y/R/B/O NT_010265AC013553639186352RH7781715231.16    1AC068213, AC068573, AC013553, AC068213, AC068573
S/G/Y/R/B/O NT_010265AC013553639201382RH6744015236.54    1AC068213, AC068573, AC013553, AC068213, AC068573
S/G/Y/R/B/O NT_010265AC068573639453431          
S/G/Y/R/B/O NT_010265AC009433640464312RH2865015227.00    1AC027736, AC084854, AC009433, AC027736, AC084854
S/G/Y/R/B/O NT_010265AC009433640464732RH3950715236.43    1AC027736, AC084854, AC009433, AC027736, AC084854
S/G/Y/R/B/O NT_010265AC009433640478322RH5411015231.16  15228.301AC027736, AC084854, AC009433, AC027736, AC084854
S/G/Y/R/B/O NT_010265AC009433640483052WI-17132    15228.401AC027736, AC084854, AC009433, AC027736, AC084854
S/G/Y/R/B/O NT_010265AC009433640483052RH5410415230.25    1AC027736, AC084854, AC009433, AC027736, AC084854


  NT_010265 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010265AC009433640486032RH5438615231.26  15223.201AC027736, AC084854, AC009433, AC027736, AC084854
S/G/Y/R/B/O NT_010265AC009433640487392RH1019915226.54    1AC027736, AC084854, AC009433, AC027736, AC084854
S/G/Y/R/B/O NT_010265AC009433640490282RH2656115231.16    1AC027736, AC084854, AC009433, AC027736, AC084854
S/G/Y/R/B/O NT_010265AC009433640584162RH9275815231.16    1AC027736, AC084854, AC009433, AC027736, AC084854
S/G/Y/R/B/O NT_010265AC011847642154003          
S/G/Y/R/B/O NT_010265AC087382643078091CHLC.GGAA17D11    15223.201AC021978, AC021978, AC087382
S/G/Y/R/B/O NT_010265AC087382643178831RH988  152209.00  1AC021978, AC021978, AC087382
S/G/Y/R/B/O NT_010265AC087382643178831RH4910715229.45    1AC021978, AC021978, AC087382
S/G/Y/R/B/O NT_010265AC087382644287661D15S153    15224.601AC021978, AC055855, AC021978, AC055855, AC087382
S/G/Y/R/B/O NT_010265AC087382644287661RH591  152254.00  1AC021978, AC055855, AC021978, AC055855, AC087382
S/G/Y/R/B/O NT_010265AC021978643517881          
S/G/Y/R/B/O NT_010265AC055855644354521          
S/G/Y/R/B/O NT_010265AC011276644596441RH5417515231.16  15226.701AC055855, AC011276, AC055855
S/G/Y/R/B/O NT_010265AC011276644981481RH4884715231.16    1AC055855, AC011276, AC055855
S/G/Y/R/B/O NT_010265AC011276645399191RH32356  152254.0015228.501AC055855, AC011276, AC055855
S/G/Y/R/B/O NT_010265AC011276645399191RH5404715230.25    1AC055855, AC011276, AC055855
S/G/Y/R/B/O NT_010265 - RH1669815236.22    1AC012568, AC016348, AC012568, AC016348
S/G/Y/R/B/O NT_010265 - RH31349  152167.00  1AC005958, AC005958
S/G/Y/R/B/O NT_010265 - SGC32776    15223.300  
S/G/Y/R/B/O NT_010265 - RH4565615231.83    0AC107871, AC107871
S/G/Y/R/B/O NT_010265 - RH33418  152202.00  1AC009292, AC022254, AC009292, AC022254
S/G/Y/R/B/O NT_010265 - WI-21585    15223.800  
S/G/Y/R/B/O NT_010265 - SGC34398    15224.501AC009560, AC012344, AC009560, AC012344
S/G/Y/R/B/O NT_010265 - RH5417415235.91  15225.400 AC024375, AC024375
S/G/Y/R/B/O NT_010265 - RH6745215236.54    1AC026086, AC087482, AC021802, AC026086, AC087482
S/G/Y/R/B/O NT_010265 - RP_L4_2    15226.200 AB061820
S/G/Y/R/B/O NT_010265 - RH6844515236.33    1AC005959, AC016355, AC106000, AC005959, AC016355, AC106000
S/G/Y/R/B/O NT_010265 - WI-5946    15226.701AC005958, AC068146, AC005958, AC013825, AC068146
S/G/Y/R/B/O NT_010265 - RH9381615231.26    2AC021155, AC021155
S/G/Y/R/B/O NT_010265 - AFM094YC1    15226.701AC005958, AC005958
S/G/Y/R/B/O NT_010265 - D15S125    15226.801AC090461, AC093334, AC090461, AC093334
S/G/Y/R/B/O NT_010265 - WI-5800    15227.801AC055782, AC024375, AC055782
S/G/Y/R/B/O NT_010265 - SGC33628    15228.301AC012568, AC016348, AC012568, AC016348
S/G/Y/R/B/O NT_010265 - SGC34014    15228.301AC079620, AC090461, AC093334, AC079620, AC090461, AC093334
S/G/Y/R/B/O NT_010265 - WI-19238    15228.401AC009292, AC022254, AC009292, AC022254
S/G/Y/R/B/O NT_010265 - WI-14364    15228.501AC012568, AC016348, AC012568, AC016348