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  Chromosome 15 - RH Maps - Single Contig
 

Chromosome 15 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_010362 NT_024668 NT_033275 NT_033278 NT_033279 NT_010346 NT_010178 NT_026446
NT_030829 NT_024683 NT_010280 NT_024666 NT_010221 NT_010363 NT_024680 NT_033266
NT_010344 NT_030828 NT_010194 NT_010289 NT_010342 NT_010351 NT_024653 NT_010265
NT_033272 NT_010222 NT_010332 NT_033270 NT_010376 NT_010298 NT_010374 NT_024703
NT_024654 NT_029450 NT_019601 NT_010249 NT_033267 NT_010356 NT_010343 NT_024674
NT_033271 NT_024670 NT_033269 NT_033276 NT_033277 NT_010352 NT_024651 NT_010274


  NT_010342
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010342AC074095576909801          
S/G/Y/R/B/O NT_010342AC012284577452663          
S/G/Y/R/B/O NT_010342AC104590578205082          
S/G/Y/R/B/O NT_010342AC009554580406023RH5431415221.09  15216.101 AC009554
S/G/Y/R/B/O NT_010342AC009554580411093RH10367815219.68    1 AC009554
S/G/Y/R/B/O NT_010342AC009554580483783RH9210115220.48    1 AC009554
S/G/Y/R/B/O NT_010342AC018618581739572RH3952315219.78    1 AC018618
S/G/Y/R/B/O NT_010342AC021542582661113RH5412515220.17  15214.201AC108716, AC021542, AC108716
S/G/Y/R/B/O NT_010342AC104574583607902RH9860915220.17    1AC108716, AC104574, AC108716
S/G/Y/R/B/O NT_010342AC104574583887692RH6546315219.96    1AC108716, AC104574, AC108716
S/G/Y/R/B/O NT_010342AC108716583426921          
S/G/Y/R/B/O NT_010342AC107908584436382WI-5241    15217.801 AC107908
S/G/Y/R/B/O NT_010342AC107908584629102WI-7454    15214.201 AC107908
S/G/Y/R/B/O NT_010342AC021460585337213RH10256815227.14    1AC032011, AC021460, AC032011, AC068126, AC087483
S/G/Y/R/B/O NT_010342AC021460585357273RH10267815222.02    1AC032011, AC021460, AC032011, AC068126, AC087483
S/G/Y/R/B/O NT_010342AC021460585552003RH3951615218.16    1AC032011, AC021460, AC032011, AC068126, AC087483
S/G/Y/R/B/O NT_010342AC032011586248423          
S/G/Y/R/B/O NT_010342AC011927588099953RH4845615219.43    1 AC011927, AC015467
S/G/Y/R/B/O NT_010342AC100839588545423          
S/G/Y/R/B/O NT_010342AC068233590188593RH7802715219.14    1AC026030, AC026030, AC068233
S/G/Y/R/B/O NT_010342AC026030590965651RH5426815221.30    1 AC026030
S/G/Y/R/B/O NT_010342AC026030590965651WI-18550    15223.201 AC026030
S/G/Y/R/B/O NT_010342AC026030590965871RH7479315220.46    1 AC026030
S/G/Y/R/B/O NT_010342AC026030590966261RH6667315216.15    1 AC026030
S/G/Y/R/B/O NT_010342AC026030590983881RH2513315231.16    1 AC026030
S/G/Y/R/B/O NT_010342AC026030590997361RH1049015222.02    1 AC026030
S/G/Y/R/B/O NT_010342AC026030590998131RH991715221.30    1 AC026030
S/G/Y/R/B/O NT_010342AC026030590998701RH4749115219.43    1 AC026030
S/G/Y/R/B/O NT_010342AC024309591330551WI-4815    15215.001AC026030, AC024309, AC026030
S/G/Y/R/B/O NT_010342AC079328593079391RH3945515224.23    1AC087612, AC079328, AC087612
S/G/Y/R/B/O NT_010342AC079328593182011RH6947915224.23    1AC087612, AC079328, AC087612
S/G/Y/R/B/O NT_010342AC079328593212971RH6909015224.23    1AC087612, AC079328, AC087612
S/G/Y/R/B/O NT_010342AC079328593257981RH9295715224.23    1AC087612, AC026817, AC079328, AC087612
S/G/Y/R/B/O NT_010342AC079328593264641RH7011115273.40    1 AC026817
S/G/Y/R/B/O NT_010342AC079328593265361RH14897  151964.00  1AC087612, AC079328, AC087612
S/G/Y/R/B/O NT_010342AC079328593265461RH8985  151964.00  1AC087612, AC026817, AC079328, AC087612
S/G/Y/R/B/O NT_010342AC079328593269971RH1731315224.23    1AC087612, AC026817, AC079328, AC087612
S/G/Y/R/B/O NT_010342AC087612593919061RH4232615224.23    2 AC026817, AC087612, AC106711
S/G/Y/R/B/O NT_010342AC087612593919061D15S159    15221.302 AC026817, AC087612, AC106711
S/G/Y/R/B/O NT_010342AC087612593919061RH593  151964.00  2 AC026817, AC087612, AC106711
S/G/Y/R/B/O NT_010342AC087612593975351RH1731215224.23    2 AC026817, AC087612, AC106711
S/G/Y/R/B/O NT_010342AC087612593989591RH9156515222.22    2 AC026817, AC087612, AC106711
S/G/Y/R/B/O NT_010342AC087612593990171RH1692015224.23    2 AC026817, AC087612, AC106711
S/G/Y/R/B/O NT_010342AC087612594056501RH4577815219.88    1 AC026817, AC087612
S/G/Y/R/B/O NT_010342AC016207595232253RH6634115222.22    1 AC016207
S/G/Y/R/B/O NT_010342AC016207595246863RH9915515227.25    1 AC016207
S/G/Y/R/B/O NT_010342AC016207595520403WI-10749    15222.701AC026279, AC016207, AC026279
S/G/Y/R/B/O NT_010342AC016207595628573RH3952115224.23    1AC026279, AC016207, AC026279
S/G/Y/R/B/O NT_010342AC026279595660551RH2628115227.10    1AC016207, AC016207, AC026279
S/G/Y/R/B/O NT_010342AC026279595807501RH37987  151971.00  1 AC026279


  NT_010342 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010342AC023591595956821          
S/G/Y/R/B/O NT_010342AC007950596347061RH4797015227.25    1 AC007950
S/G/Y/R/B/O NT_010342 - RH10271515224.93    0  
S/G/Y/R/B/O NT_010342 - RH1067015224.23    0  
S/G/Y/R/B/O NT_010342 - RH1080415222.22    1AC024631, AC100840, AC110054, AC017098, AC024631, AC067846, AC100840, AC110054
S/G/Y/R/B/O NT_010342 - RH1089915224.23    0  
S/G/Y/R/B/O NT_010342 - RH1737515222.72    2AC023148, AC062023, AC087632, AC091231, AC023148, AC062023, AC087632, AC091231
S/G/Y/R/B/O NT_010342 - RH2532815222.42    1AC023148, AC062023, AC087632, AC091231, AC023148, AC062023, AC087632, AC091231
S/G/Y/R/B/O NT_010342 - RH3954815224.23    0  
S/G/Y/R/B/O NT_010342 - RH3957415222.02    1AC023148, AC062023, AC087632, AC091231, AC023148, AC062023, AC087632, AC091231
S/G/Y/R/B/O NT_010342 - RH4457415219.65    1AC069368, AC069368
S/G/Y/R/B/O NT_010342 - RH4535715220.80    0  
S/G/Y/R/B/O NT_010342 - RH4560315219.96    1AC021541, AC024631, AC100840, AC017098, AC021541, AC024631, AC067846, AC100840
S/G/Y/R/B/O NT_010342 - RH4724915224.23    0  
S/G/Y/R/B/O NT_010342 - RH4750215221.91    1AC024631, AC100840, AC110054, AC017098, AC024631, AC067846, AC100840, AC110054
S/G/Y/R/B/O NT_010342 - RH5402915221.40    1AC100840, AC110054, AC017098, AC067846, AC100840, AC110054
S/G/Y/R/B/O NT_010342 - RH5404515221.81    0  
S/G/Y/R/B/O NT_010342 - RH5409815224.13    0  
S/G/Y/R/B/O NT_010342 - RH5421115224.23    0  
S/G/Y/R/B/O NT_010342 - RH5427415222.73    1AC023148, AC091231, AC023148, AC091231
S/G/Y/R/B/O NT_010342 - RH5429015224.23    0  
S/G/Y/R/B/O NT_010342 - RH5439115219.88    1AC069368, AC069368
S/G/Y/R/B/O NT_010342 - RH5439915221.91    1AC024631, AC100840, AC110054, AC017098, AC024631, AC067846, AC100840, AC110054
S/G/Y/R/B/O NT_010342 - RH5441615221.70    0  
S/G/Y/R/B/O NT_010342 - RH7041315221.72    1AC021541, AC024631, AC100840, AC017098, AC021541, AC024631, AC067846, AC100840
S/G/Y/R/B/O NT_010342 - RH7578015220.17    1AC024631, AC100840, AC110054, AC017098, AC024631, AC067846, AC100840, AC110054
S/G/Y/R/B/O NT_010342 - RH7578315224.13    0  
S/G/Y/R/B/O NT_010342 - RH7779615221.61    1AC062023, AC087632, AC062023, AC087632
S/G/Y/R/B/O NT_010342 - RH9157315220.27    1AC024631, AC100840, AC110054, AC017098, AC024631, AC067846, AC100840, AC110054
S/G/Y/R/B/O NT_010342 - RH9150315222.22    0