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  Chromosome 15 - RH Maps - Single Contig
 

Chromosome 15 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_010362 NT_024668 NT_033275 NT_033278 NT_033279 NT_010346 NT_010178 NT_026446
NT_030829 NT_024683 NT_010280 NT_024666 NT_010221 NT_010363 NT_024680 NT_033266
NT_010344 NT_030828 NT_010194 NT_010289 NT_010342 NT_010351 NT_024653 NT_010265
NT_033272 NT_010222 NT_010332 NT_033270 NT_010376 NT_010298 NT_010374 NT_024703
NT_024654 NT_029450 NT_019601 NT_010249 NT_033267 NT_010356 NT_010343 NT_024674
NT_033271 NT_024670 NT_033269 NT_033276 NT_033277 NT_010352 NT_024651 NT_010274


  NT_010274
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010274AC080032938353531RH5439515359.51    1AC073835, AL365277, AC073835, AL365277
S/G/Y/R/B/O NT_010274AC080032938353531WI-19844    15354.901AC073835, AL365277, AC073835, AL365277
S/G/Y/R/B/O NT_010274AC022477938525551          
S/G/Y/R/B/O NT_010274AC110027939701332D15S130    15357.201 AC110027
S/G/Y/R/B/O NT_010274AC110027939701942RH4900415337.35    1AC020562, AC020562, AC110027
S/G/Y/R/B/O NT_010274AC020562940339861          
S/G/Y/R/B/O NT_010274AC011714942364781RH31356  153470.00  1 AC011714
S/G/Y/R/B/O NT_010274AC009432942825772CHLC.GATA73F01    15357.101AC011714, AC009432, AC011714
S/G/Y/R/B/O NT_010274AC009432942860732RH37986  153470.00  1AC011714, AC009432, AC011714
S/G/Y/R/B/O NT_010274AC009432942860972RH38561  153470.00  1AC011714, AC009432, AC011714
S/G/Y/R/B/O NT_010274AC009432942879912RH4642915337.25    1AC011714, AC009432, AC011714
S/G/Y/R/B/O NT_010274AC009432944076462RH8870  153484.00  1AC103986, AC009432, AC026649, AC103986
S/G/Y/R/B/O NT_010274AC103986944477543          
S/G/Y/R/B/O NT_010274AC022308944999653          
S/G/Y/R/B/O NT_010274AC107976946628563RH9148819255.29    1 AC107976
S/G/Y/R/B/O NT_010274AC087633947975033RH5417215339.78  15359.201 AC021111, AC087633
S/G/Y/R/B/O NT_010274AC087636949090992          
S/G/Y/R/B/O NT_010274AC016322950152873RH5420815339.78153505.0015357.801AC087636, AC104260, AC016322, AC021147, AC023111, AC087636, AC104260
S/G/Y/R/B/O NT_010274AC016322950153623RH74509  153498.00  1AC087636, AC104260, AC016322, AC021147, AC023111, AC087636, AC104260
S/G/Y/R/B/O NT_010274AC016322950315253RH5409115339.88  15359.101AC104260, AC016322, AC023111, AC104260
S/G/Y/R/B/O NT_010274AC016322950527923RH6847015339.98    1AC104260, AC016322, AC023111, AC104260
S/G/Y/R/B/O NT_010274AC016322950985263D15S157    15359.101AC104260, AC016322, AC023111, AC104260
S/G/Y/R/B/O NT_010274AC016322950985263RH4906115339.88153498.00  1AC104260, AC016322, AC023111, AC104260
S/G/Y/R/B/O NT_010274AC104260951808543RH5433915339.88  15360.901AC027547, AC027547, AC104260
S/G/Y/R/B/O NT_010274AC027547951914053          
S/G/Y/R/B/O NT_010274AC027013952698543RH10404715339.88    1 AC009437, AC015950, AC027013
S/G/Y/R/B/O NT_010274AC068515954736833RH597  153491.00  1AC015574, AC012256, AC015572, AC015574, AC068515
S/G/Y/R/B/O NT_010274AC015574955019293          
S/G/Y/R/B/O NT_010274AC011114955981313          
S/G/Y/R/B/O NT_010274AC018574957001022          
S/G/Y/R/B/O NT_010274AC024337958531033          
S/G/Y/R/B/O NT_010274AC012409959677003CHLC.GATA22F01    15361.901AC016251, AC012409, AC016251
S/G/Y/R/B/O NT_010274AC012409959921863RH3956315341.89    1AC016251, AC012409, AC016251
S/G/Y/R/B/O NT_010274AC012409960010123RH37840  153558.00  1 AC103746
S/G/Y/R/B/O NT_010274AC012409960024833RH6594515341.89    1AC016251, AC012409, AC016251
S/G/Y/R/B/O NT_010274AC012409960593653RH9305415341.89    1AC016251, AC012409, AC016251
S/G/Y/R/B/O NT_010274AC012409960718473RH4794715356.15    1AC016251, AC012409, AC016251
S/G/Y/R/B/O NT_010274AC016251960819502WI-3675    15363.501 AC016251, AC103746
S/G/Y/R/B/O NT_010274AC016251961330852RH3957715341.89    1 AC016251
S/G/Y/R/B/O NT_010274AC016251961460902RH5441715341.89  15363.501 AC016251
S/G/Y/R/B/O NT_010274AC016251961461782RH4571115341.89    1 AC016251, AC103746
S/G/Y/R/B/O NT_010274AC036108971755571RH9874115347.90    1AC018999, AC027085, AC018999, AC027085, AC036108
S/G/Y/R/B/O NT_010274AC036108971756321RH5409615348.31  15371.801AC018999, AC027085, AC018999, AC027085, AC036108
S/G/Y/R/B/O NT_010274AC016810961674381          
S/G/Y/R/B/O NT_010274AC027085961960041RH1513715346.39  15369.501AC016810, AC016810, AC027085
S/G/Y/R/B/O NT_010274AC027085962275481RH5442515347.90153653.0015370.701AC016810, AC016810, AC027085
S/G/Y/R/B/O NT_010274AC027085971775461RH7030115346.39    1 AC027085
S/G/Y/R/B/O NT_010274AC018999971798391RH9182115347.90    1AC027085, AC036108, AC018999, AC027085, AC036108
S/G/Y/R/B/O NT_010274AC080108962076121          
S/G/Y/R/B/O NT_010274AC069029962949843RH9436015347.90    1AC016810, AC027085, AC080108, AC016810, AC027085, AC069029, AC080108


  NT_010274 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010274AC069029962972703RH9251015347.90    1AC016810, AC027085, AC080108, AC016810, AC027085, AC069029, AC080108
S/G/Y/R/B/O NT_010274AC069029962988053RH4439015346.49    1AC016810, AC027085, AC016810, AC027085, AC069029
S/G/Y/R/B/O NT_010274AC069029962988063RH5431015350.26  15370.701AC016810, AC027085, AC016810, AC027085, AC069029
S/G/Y/R/B/O NT_010274AC069029963003783RH8975  153693.00  1AC016810, AC027085, AC016810, AC027085, AC069029
S/G/Y/R/B/O NT_010274AC069029963195103RH5424315350.16153661.0015369.501AC080108, AC069029, AC080108
S/G/Y/R/B/O NT_010274AC069029963195103RH7020715346.39    1AC080108, AC069029, AC080108
S/G/Y/R/B/O NT_010274AC069029963443033RH6951415346.39    1AC080108, AC069029, AC080108
S/G/Y/R/B/O NT_010274AC069029963700323AFMA305YE1    15369.601AC080108, AC080108
S/G/Y/R/B/O NT_010274AC055807964249453RH7615815353.97    1AC069029, AC080108, AC069029, AC080108
S/G/Y/R/B/O NT_010274AC055807964293863RH7781815346.49    1AC069029, AC080108, AC055807, AC069029, AC080108
S/G/Y/R/B/O NT_010274AC055807964964803RH4470315348.21    1 AC055807
S/G/Y/R/B/O NT_010274AC055807965191473RH9432915346.49    1  
S/G/Y/R/B/O NT_010274AC055807965343583RH5433015356.59  15369.501 AC055807
S/G/Y/R/B/O NT_010274AC009561965667111          
S/G/Y/R/B/O NT_010274AC103968965786892          
S/G/Y/R/B/O NT_010274AC015722967560771          
S/G/Y/R/B/O NT_010274AC107975967833302RH10383115350.79    1 AC107975
S/G/Y/R/B/O NT_010274AC022523968291123WI-5967    15368.501AC107975, AC022523, AC107975
S/G/Y/R/B/O NT_010274AC022523969495983RH7115215345.58    1AC099688, AC107975, AC022523, AC099688, AC107975
S/G/Y/R/B/O NT_010274AC099688970187622RH33463  153608.00  1AC015722, AC015722, AC099688
S/G/Y/R/B/O NT_010274AC099688970189262RH7779715346.49    1AC015722, AC015722, AC099688
S/G/Y/R/B/O NT_010274AC022819971922741RH5421015352.47153655.0015372.401AC018999, AC036108, AC018999, AC022819, AC036108
S/G/Y/R/B/O NT_010274AC022819971922831RH4414615351.84    1AC018999, AC036108, AC018999, AC022819, AC036108
S/G/Y/R/B/O NT_010274AC022819973023051RH4418715347.90    1AC037479, AC022819, AC037479
S/G/Y/R/B/O NT_010274AC037479973363531          
S/G/Y/R/B/O NT_010274AC015660974017993RH9864115347.90    1AC037479, AC015660, AC037479
S/G/Y/R/B/O NT_010274AC015660974283073RH1083715351.84    1AC036108, AC037479, AC015660, AC036108, AC037479
S/G/Y/R/B/O NT_010274AC015660974300423RH5433315346.49  15371.801AC037479, AC015660, AC037479
S/G/Y/R/B/O NT_010274AC015660974326953RH7502815350.26    1AC037479, AC015660, AC037479
S/G/Y/R/B/O NT_010274AC103967976384263RH7871415349.85    1AC013526, AC022692, AC011766, AC011769, AC013526, AC022692, AC103967
S/G/Y/R/B/O NT_010274AC013526976754633RH3958515347.50    1AC022692, AC011766, AC011769, AC013526, AC022692
S/G/Y/R/B/O NT_010274AC013526977225633RH5435215349.85  15374.101AC022692, AC011766, AC011769, AC013526, AC022692
S/G/Y/R/B/O NT_010274AC013526977227083RH6718615347.60    1AC022692, AC011766, AC013526, AC022692
S/G/Y/R/B/O NT_010274AC013526977227233RH4445315349.85    1AC022692, AC011766, AC011769, AC013526, AC022692
S/G/Y/R/B/O NT_010274AC022692977395932RH4506815351.84    1AC019182, AB001899, AC011766, AC019182, AC022692
S/G/Y/R/B/O NT_010274AC022692985426742RH7065115353.86    1AC019182, AC011766, AC019182, AC022692
S/G/Y/R/B/O NT_010274AC022692985486022RH8979  153643.00  1AC019182, AC011766, AC019182, AC022692
S/G/Y/R/B/O NT_010274AC055861977426761          
S/G/Y/R/B/O NT_010274AC107977977541732          
S/G/Y/R/B/O NT_010274AC025234978515711          
S/G/Y/R/B/O NT_010274AC027559979280341RH5417915360.78  15391.101AC025234, AC055861, AC025234, AC027559, AC055861
S/G/Y/R/B/O NT_010274AC027559979813261RH1697215355.82    1AC025234, AC025234, AC027559
S/G/Y/R/B/O NT_010274AC027559979825611RH5446715359.17  15393.401AC025234, AC025234, AC027559
S/G/Y/R/B/O NT_010274AC027559979826091RH5429715356.82  15391.301AC025234, AC025234, AC027559
S/G/Y/R/B/O NT_010274AC027559979827271RH2564215357.37    1AC025234, AC025234, AC027559
S/G/Y/R/B/O NT_010274AC027559979827431RH3690915358.49    1AC025234, AC025234, AC027559
S/G/Y/R/B/O NT_010274AC027559980272511RH9410715360.43    1AC016672, AC090164, AC016672, AC027559, AC090164
S/G/Y/R/B/O NT_010274AC027559980392671RH7792015358.49    1AC016672, AC090164, AC016672, AC027559, AC090164
S/G/Y/R/B/O NT_010274AC027559980392871RH2548315358.49    1AC016672, AC090164, AC016672, AC027559, AC090164
S/G/Y/R/B/O NT_010274AC027559980478811RH1707315355.38    1AC016672, AC090164, AC016672, AC027559, AC090164


  NT_010274 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010274AC090164980597121RH9190315356.37    1AC016672, AC016672, AC090164
S/G/Y/R/B/O NT_010274AC090164980636751RH2848015356.37    1 AC090164
S/G/Y/R/B/O NT_010274AC090164981191221WI-5214    15383.501AC016672, AC016672, AC090164
S/G/Y/R/B/O NT_010274AC025555982832401RH4411215354.19    1AC087528, AC025555, AC087528
S/G/Y/R/B/O NT_010274AC025555982847761RH3947415351.94    1AC087528, AB001903, AC025555, AC087528
S/G/Y/R/B/O NT_010274AC025555982847781RH4460215351.94    1AC087528, AB001903, AC025555, AC087528
S/G/Y/R/B/O NT_010274AC016672981916391          
S/G/Y/R/B/O NT_010274AC087528983206801          
S/G/Y/R/B/O NT_010274AC023024983299453SGC35346    15378.901 AB001909, AC023024
S/G/Y/R/B/O NT_010274AC023024983725813RH4409615354.19    1 AB001914, AC023024
S/G/Y/R/B/O NT_010274AC023024983734703RH7042915353.22    1 AB001914, AC023024
S/G/Y/R/B/O NT_010274AC023024983768393RH1043915353.97    1 AC023024
S/G/Y/R/B/O NT_010274AC023024983859313RH7663315358.16    1 AC023024
S/G/Y/R/B/O NT_010274AC023024984052113RH4696915352.05    1 AC023024
S/G/Y/R/B/O NT_010274AC023024984066883RH10195915352.26    1 AC023024
S/G/Y/R/B/O NT_010274AC019254985016251RH7770915358.04    2AC011979, AC011979, AC019254, AJ277546
S/G/Y/R/B/O NT_010274AC019182985699131          
S/G/Y/R/B/O NT_010274AC090825986855611RH3951515349.64    1AC084855, AC012053, AC013519, AC084855, AC090825
S/G/Y/R/B/O NT_010274AC084855986942121          
S/G/Y/R/B/O NT_010274AC022710988607662WI-4919    15374.001 AC022710
S/G/Y/R/B/O NT_010274AC022710989831052WI-3987    15374.101AC113187, AC022710, AC113187
S/G/Y/R/B/O NT_010274AC113187990150922          
S/G/Y/R/B/O NT_010274AC015723991988302RH9211915351.84    1 AC015723, AC016079
S/G/Y/R/B/O NT_010274AC027020993461532RH7665515356.26    1 AC027020
S/G/Y/R/B/O NT_010274AC025229993558931          
S/G/Y/R/B/O NT_010274AC090695993722722RH7874115349.85    1AC025229, AC027020, AC025229, AC027020, AC090695
S/G/Y/R/B/O NT_010274AC090695994543062RH9384715351.84    1AC025229, AC025229, AC090695
S/G/Y/R/B/O NT_010274AC090695994544112RH3950415349.85    1AC025229, AC025229, AC090695
S/G/Y/R/B/O NT_010274AC015560995130341          
S/G/Y/R/B/O NT_010274AC087762995217701          
S/G/Y/R/B/O NT_010274AC015712996368321RH5438415348.10  15372.901 AC015712
S/G/Y/R/B/O NT_010274AC015712996369681RH6628515351.84    1 AC015712
S/G/Y/R/B/O NT_010274AC015712996952061RH4881215349.85    1 AC015712
S/G/Y/R/B/O NT_010274AC015712997196111RH6639715349.85    1 AC015712
S/G/Y/R/B/O NT_010274AC015712997220041RH3952615347.50    1 AC015712
S/G/Y/R/B/O NT_010274AC090907997438131          
S/G/Y/R/B/O NT_010274AC020578998516711RH3683515353.97    1AC090907, AC090907
S/G/Y/R/B/O NT_010274AC020578998517081RH4481015352.05    1AC090907, AC020578, AC090907
S/G/Y/R/B/O NT_010274AC020578998723691RH9353615350.16    1AC019254, AC090907, AC019254, AC020578, AC090907, AL390202
S/G/Y/R/B/O NT_010274 - RH2502815345.58    1AC024651, AC024651
S/G/Y/R/B/O NT_010274 - RH33351  153567.00  1AC080145, AC080145
S/G/Y/R/B/O NT_010274 - WI-10435    15363.501AC080145, AC080145
S/G/Y/R/B/O NT_010274 - RH2503515348.41    1AL109976, AL109976
S/G/Y/R/B/O NT_010274 - RH598  153586.00  1AC013794, AC026523, AC013794, AC026523
S/G/Y/R/B/O NT_010274 - CHLC.GATA8C05.449    15363.501AC027004, AC027004
S/G/Y/R/B/O NT_010274 - RH2671215358.95    1AC024651, AC024651
S/G/Y/R/B/O NT_010274 - RH7977  153601.00  1AC024651, AC024651
S/G/Y/R/B/O NT_010274 - WI-3162    15370.600  
S/G/Y/R/B/O NT_010274 - RH2718615353.86    0  
S/G/Y/R/B/O NT_010274 - RH3949115346.39    0  


  NT_010274 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010274 - RH3959115352.90    0  
S/G/Y/R/B/O NT_010274 - RH4787615345.58    1AC024651, AC024651
S/G/Y/R/B/O NT_010274 - RH4788415359.29    1AC024651, AC024651
S/G/Y/R/B/O NT_010274 - RH4824515346.49    0  
S/G/Y/R/B/O NT_010274 - RH9818115360.09    1AC092608, AC092608