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  Chromosome 11 - RH Maps - Single Contig
 

Chromosome 11 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009407 NT_009308 NT_008953 NT_008937 NT_024164 NT_033238 NT_009368 NT_028310
NT_033239 NT_009325 NT_008957 NT_024194 NT_033233 NT_033231 NT_028309 NT_030795
NT_017854 NT_009062 NT_024163 NT_024275 NT_009038 NT_009306 NT_009307 NT_030792
NT_030801 NT_024200 NT_024283 NT_033235 NT_009182 NT_033242 NT_008952 NT_024172
NT_033236 NT_024189 NT_009237 NT_024229 NT_009020 NT_024192 NT_033915 NT_009296
NT_009178 NT_008978 NT_024343 NT_027118 NT_027110 NT_030109 NT_024169 NT_033902
NT_033903 NT_033913 NT_033994 NT_033237 NT_009405 NT_033232 NT_024160 NT_030106
NT_033241 NT_033923 NT_033926 NT_033900 NT_033929 NT_033930 NT_033925 NT_033924
NT_033928 NT_024149 NT_033927 NT_033243 NT_033240 NT_008984 NT_009151 NT_033244
NT_033899 NT_030800 NT_033901


  NT_028309
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_028309AC111188107066472RH655721148.79    1AC027101, AC027101, AC111188
S/G/Y/R/B/O NT_028309AC02710189733231          
S/G/Y/R/B/O NT_028309AC01912689749461RH749991145.29    1 AC019126, AJ295844
S/G/Y/R/B/O NT_028309AC01912689750201RH1031351145.25    1 AC019126, AJ295844
S/G/Y/R/B/O NT_028309AC01912690088181RH457061144.64    1 AC019126, AJ295844
S/G/Y/R/B/O NT_028309AC01912690740461RH522121145.36    1 AC019126, AJ295844
S/G/Y/R/B/O NT_028309AC01912690740461IB3562    1143.701 AC019126, AJ295844
S/G/Y/R/B/O NT_028309AC01912690744591RH33699  11298.00  1 AC019126, AJ295844
S/G/Y/R/B/O NT_028309AC01912690752501RH520521145.2911298.00  1 AC019126, AJ295844
S/G/Y/R/B/O NT_028309AC01912690752501SGC31060    1145.901 AC019126, AJ295844
S/G/Y/R/B/O NT_028309AC01912690934461RH762931145.19    1 AC019126, AJ277546
S/G/Y/R/B/O NT_028309AC01912690938661RH399711145.19    1 AC019126, AJ277546
S/G/Y/R/B/O NT_028309AC01912690940891RH37888  11300.00  1 AC019126, AJ277546
S/G/Y/R/B/O NT_028309AC01197991521263RH273501145.15    1AC019126, AC011979, AC019126, AJ277546
S/G/Y/R/B/O NT_028309AC01197991527143RH708571145.15    1AC019126, AC011979, AC019126, AJ277546
S/G/Y/R/B/O NT_028309AC01197991934923RH7770915358.04    2AC019254, AC011979, AC019254, AJ277546
S/G/Y/R/B/O NT_028309AC01197992444823RH463167542.31    3AC004112, AL513165, AP001178, AP003691, AC004112, AC011979, AL139414, AL513165, AP001178, AP003691
S/G/Y/R/B/O NT_028309AC02625093151602RH1031321148.79    1AC025788, AC025788, AC026250
S/G/Y/R/B/O NT_028309AC02625093160702RH1028401148.79    1AC025788, AC025788, AC026250
S/G/Y/R/B/O NT_028309AC02625093162302RH810401148.79    1AC025788, AC025788, AC026250
S/G/Y/R/B/O NT_028309AC02625093412622RH517721148.69  1148.801AC025788, AC025788, AC026250
S/G/Y/R/B/O NT_028309AC02625093423482RH520531148.69  1148.801AC025788, AC025788, AC026250
S/G/Y/R/B/O NT_028309AC02625093427252RH699471150.28    1AC025788, AC025788, AC026250
S/G/Y/R/B/O NT_028309AC02625093435282RH182371148.79    1AC025788, AC025788, AC026250
S/G/Y/R/B/O NT_028309AC02625093805732RH659591145.92    1AC012333, AC012333, AC026250
S/G/Y/R/B/O NT_028309AC02578893495171          
S/G/Y/R/B/O NT_028309AC05353194262951          
S/G/Y/R/B/O NT_028309AC01109295373731RH806881148.89    1 AC011092
S/G/Y/R/B/O NT_028309AC10076396000903          
S/G/Y/R/B/O NT_028309AC01570097730531          
S/G/Y/R/B/O NT_028309AC09055698446751          
S/G/Y/R/B/O NT_028309AC08002398716922RH520211148.79  1148.801AC090556, AC080023, AC090556
S/G/Y/R/B/O NT_028309AC08002398720592RH173821150.28    1AC090556, AC080023, AC090556, D43639, S73906
S/G/Y/R/B/O NT_028309AC08002399300842RH748241150.99    1AC090556, AC018539, AC080023, AC090556
S/G/Y/R/B/O NT_028309AC021914100722572RH400951148.79    1 AC021914, U29926
S/G/Y/R/B/O NT_028309AC021914100724002RH462591147.27    1 AC021914
S/G/Y/R/B/O NT_028309AC021914100730592RH8915  11334.00  1 AC021914, J01415, NC_001807, V00662
S/G/Y/R/B/O NT_028309AC021914100770362RH917691148.79    1 AC021914
S/G/Y/R/B/O NT_028309AC021914100770382RH274221148.79    1 AC021914
S/G/Y/R/B/O NT_028309AC021914100770532RH274241148.79    1 AC021914
S/G/Y/R/B/O NT_028309AC021914100776372RH360871155.42    1 AC021914
S/G/Y/R/B/O NT_028309AC021914100781372RH251481148.79    1 AC021914
S/G/Y/R/B/O NT_028309AC021914100795782RH8946  11319.00  1 AC021914
S/G/Y/R/B/O NT_028309AC021914100799602RH400271150.28    1 AC021914
S/G/Y/R/B/O NT_028309AC021914100862182RH460971148.79    1 AC021914
S/G/Y/R/B/O NT_028309AC021914100864812RH400261150.28    1 AC021914
S/G/Y/R/B/O NT_028309AC009532101205093RH756331147.17    1 AC009532
S/G/Y/R/B/O NT_028309AC009532101205563RH399231148.79    1 AC009532
S/G/Y/R/B/O NT_028309AC009532101229513RH7883  11319.00  1 AC009532
S/G/Y/R/B/O NT_028309AC009532101234723RH128731148.79    1 AC009532


  NT_028309 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_028309AC009532101382623RH523431148.79  1148.801 AC009532
S/G/Y/R/B/O NT_028309AC009532101384703RH1023911148.79    1 AC009532
S/G/Y/R/B/O NT_028309AC009532101647703RH925751148.79    1 AC009532
S/G/Y/R/B/O NT_028309AC009532101758433WI-9774    1148.801 AC009532
S/G/Y/R/B/O NT_028309AC009532102603883RH135861148.7911324.00  1AC025744, AC009532, AC025744
S/G/Y/R/B/O NT_028309AC009532102634853CHLC.GATA23F06    1148.801AC025744, AC009532, AC025744
S/G/Y/R/B/O NT_028309AC025744103164121RH253741150.28    1 AC025744
S/G/Y/R/B/O NT_028309AC025744103389661RH933221148.79    1 AC025744
S/G/Y/R/B/O NT_028309AC025744103440581RH521691148.6911345.001148.701 AC025744
S/G/Y/R/B/O NT_028309AC025744103687591RH766261155.42    1 AC025744
S/G/Y/R/B/O NT_028309AC069360104180061RH184521148.79    1AC025744, AC025744, AC069360, AF205601
S/G/Y/R/B/O NT_028309AC069360104197261RH522661148.69  1148.801AC025744, AC025744, AC069360, AF205601
S/G/Y/R/B/O NT_028309AC069360104441111RH991411148.79    1 AC069360
S/G/Y/R/B/O NT_028309AC069360104441211RH400691148.79    1 AC069360
S/G/Y/R/B/O NT_028309AC023850104987462RH757631148.89    1AC069360, AC023850, AC069360
S/G/Y/R/B/O NT_028309AC084243107867751WI-4247    1148.801 AC084243
S/G/Y/R/B/O NT_028309AC084243108317241RH109881148.79    1 AC084243
S/G/Y/R/B/O NT_028309AC023946109134531RH655331148.79    1 AC023946, X64692
S/G/Y/R/B/O NT_028309AC023946109138321RH518421148.79  1148.801AL049761, AC023946, AC040953, AL049761, X64692
S/G/Y/R/B/O NT_028309AC104031111506282RH942111148.79    1 AC104031
S/G/Y/R/B/O NT_028309AC104031111596622RH517471148.79  1148.801 AC104031
S/G/Y/R/B/O NT_028309 - RH126321148.79    0  
S/G/Y/R/B/O NT_028309 - RH260641145.25    0  
S/G/Y/R/B/O NT_028309 - RH399931148.79    0  
S/G/Y/R/B/O NT_028309 - RH400601148.79    0  
S/G/Y/R/B/O NT_028309 - RH452051145.25    0 AJ400877
S/G/Y/R/B/O NT_028309 - RH495301148.79    0  
S/G/Y/R/B/O NT_028309 - RH521531146.44    1AC027641, AC091564, AC027641, AC091564
S/G/Y/R/B/O NT_028309 - RH522191148.79  1148.800  
S/G/Y/R/B/O NT_028309 - RH711841145.15    0 AJ400877