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  Chromosome 11 - RH Maps - Single Contig
 

Chromosome 11 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009407 NT_009308 NT_008953 NT_008937 NT_024164 NT_033238 NT_009368 NT_028310
NT_033239 NT_009325 NT_008957 NT_024194 NT_033233 NT_033231 NT_028309 NT_030795
NT_017854 NT_009062 NT_024163 NT_024275 NT_009038 NT_009306 NT_009307 NT_030792
NT_030801 NT_024200 NT_024283 NT_033235 NT_009182 NT_033242 NT_008952 NT_024172
NT_033236 NT_024189 NT_009237 NT_024229 NT_009020 NT_024192 NT_033915 NT_009296
NT_009178 NT_008978 NT_024343 NT_027118 NT_027110 NT_030109 NT_024169 NT_033902
NT_033903 NT_033913 NT_033994 NT_033237 NT_009405 NT_033232 NT_024160 NT_030106
NT_033241 NT_033923 NT_033926 NT_033900 NT_033929 NT_033930 NT_033925 NT_033924
NT_033928 NT_024149 NT_033927 NT_033243 NT_033240 NT_008984 NT_009151 NT_033244
NT_033899 NT_030800 NT_033901


  NT_008978
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008978AC021573508482561RH5215911168.92  11158.401 AC021573
S/G/Y/R/B/O NT_008978AC103792509602743          
S/G/Y/R/B/O NT_008978AC090470511611191RH10418811169.38    1AC090589, AC090470, AC090589
S/G/Y/R/B/O NT_008978AC090470511694371RH5193111169.93  11158.601AC024045, AC090589, AC024045, AC090470, AC090589
S/G/Y/R/B/O NT_008978AC090470511695671RH1071411167.87    1AC024045, AC090589, AC024045, AC090470, AC090589
S/G/Y/R/B/O NT_008978AC090470511719521RH5225411169.00  11165.201AC024045, AC090589, AC024045, AC090470, AC090589
S/G/Y/R/B/O NT_008978AC090589511441981          
S/G/Y/R/B/O NT_008978AC024045511458091          
S/G/Y/R/B/O NT_008978AC018410512464502RH1800811167.87    1AC024045, AC090589, AC018410, AC022470, AC024045, AC090589
S/G/Y/R/B/O NT_008978AC018410512465842RH1824611169.00    1AC024045, AC090589, AC018410, AC022470, AC024045, AC090589
S/G/Y/R/B/O NT_008978AC018410512465922RH5196711167.08  11160.101AC024045, AC090589, AC018410, AC022470, AC024045, AC090589
S/G/Y/R/B/O NT_008978AC018410512469732RH7915611167.87    1AC024045, AC090589, AC018410, AC022470, AC024045, AC090589
S/G/Y/R/B/O NT_008978AC018410512762142RH4009211167.87    1AC024045, AC090589, AC018410, AC024045, AC090589
S/G/Y/R/B/O NT_008978AC018410512763392RH7630411167.74    1AC024045, AC090589, AC018410, AC022470, AC024045, AC090589
S/G/Y/R/B/O NT_008978AC018410513373572RH5193911169.38  11160.101AC019059, AC090582, AC018410, AC019059, AC090582, U91629
S/G/Y/R/B/O NT_008978AC090582514693881RH3660511169.38    1AC019059, AC090559, AC019059, AC090559, AC090582
S/G/Y/R/B/O NT_008978AC090582514713981RH4001811169.71    1AC019059, AC090559, AC019059, AC074195, AC090559, AC090582
S/G/Y/R/B/O NT_008978AC090582514736811RH6951811167.87    1AC019059, AC090559, AC019059, AC074195, AC090559, AC090582
S/G/Y/R/B/O NT_008978AC090582514737261RH7577811169.71    1AC019059, AC090559, AC019059, AC074195, AC090559, AC090582
S/G/Y/R/B/O NT_008978AC090582514746961RH6638411169.25    1AC019059, AC090559, AC019059, AC074195, AC090559, AC090582
S/G/Y/R/B/O NT_008978AC019059513986021          
S/G/Y/R/B/O NT_008978AC090559514221281RH7025111168.33    1AC019059, AC090582, AC019059, AC074195, AC090559, AC090582
S/G/Y/R/B/O NT_008978AC090559517286341RH6709911167.87    1AC067943, AC067943, AC090559
S/G/Y/R/B/O NT_008978AC090559517534411RH14832  112166.00  1AC067943, AC067943, AC090559
S/G/Y/R/B/O NT_008978AC074190515616731WI-18182    11170.501AC023232, AC023232, AC074190
S/G/Y/R/B/O NT_008978AC023232516484521RH8849  93334.00  2AC074190, AL137067, AC009830, AC023232, AC027143, AC074190, AL137067
S/G/Y/R/B/O NT_008978AC067943517889101RH4725611168.92    1AC090559, AC067943, AC090559
S/G/Y/R/B/O NT_008978AC104942518235042RH7805511169.84    1AC067943, AC067943, AC104942
S/G/Y/R/B/O NT_008978AC104942518235532RH5185611169.84  11159.501AC067943, AC067943, AC104942
S/G/Y/R/B/O NT_008978AC104942518347142RH169319390.20    1AC067943, AC067943, AC104942
S/G/Y/R/B/O NT_008978AC104942519304442RH5160611168.79  11162.101AC021443, AC021443, AC104942
S/G/Y/R/B/O NT_008978AC104942519305222RH4828611169.84    1AC021443, AC021443, AC104942
S/G/Y/R/B/O NT_008978AC104942519307002RH10183211169.84    1AC021443, AC021443, AC104942
S/G/Y/R/B/O NT_008978AC021443519369061RH32937  112185.0011172.301 AC021443
S/G/Y/R/B/O NT_008978AC021443519378171RH5227411169.84112185.0011159.501AC104942, AC021443, AC104942
S/G/Y/R/B/O NT_008978AC021443519438811RH5197811169.93  11168.901AC104942, AC021443, AC104942
S/G/Y/R/B/O NT_008978 - RH1692911169.84    1AL359091, AC006312, AL359091
S/G/Y/R/B/O NT_008978 - WI-13314    11165.001AP002509, AP002509
S/G/Y/R/B/O NT_008978 - RH1752011167.21    0 M17262
S/G/Y/R/B/O NT_008978 - SGC34210    11169.301AC026975, AC026975
S/G/Y/R/B/O NT_008978 - RH2721811168.21    1AC068385, AC068385
S/G/Y/R/B/O NT_008978 - CHLC.GATA22D05    11169.700  
S/G/Y/R/B/O NT_008978 - RH2746611167.08    0  
S/G/Y/R/B/O NT_008978 - RH2748611168.92    0  
S/G/Y/R/B/O NT_008978 - RH2855211167.54    1AC104249, AC104362, AC104249, AC104362
S/G/Y/R/B/O NT_008978 - RH5228011167.87    0  
S/G/Y/R/B/O NT_008978 - RH6489911168.92    2AC005829, AC048388, AC068385, AC073426, AC090419, AC005829, AC048388, AC068385, AC073426, AC090419
S/G/Y/R/B/O NT_008978 - RH6562711169.13    1AC068235, AC069480, AC068235, AC069480
S/G/Y/R/B/O NT_008978 - RH7662711168.46    1AC023085, AC025552, AC087276, AC023085, AC025552, AC087276
S/G/Y/R/B/O NT_008978 - RH7837011168.58    0  


  NT_008978 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008978 - RH9157611168.92    0  
S/G/Y/R/B/O NT_008978 - RH9830511169.25    1AC025533, AC068457, AC025533, AC068457
S/G/Y/R/B/O NT_008978 - RH9882511167.87    1AL356000, AL356000