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  Chromosome 11 - RH Maps - Single Contig
 

Chromosome 11 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009407 NT_009308 NT_008953 NT_008937 NT_024164 NT_033238 NT_009368 NT_028310
NT_033239 NT_009325 NT_008957 NT_024194 NT_033233 NT_033231 NT_028309 NT_030795
NT_017854 NT_009062 NT_024163 NT_024275 NT_009038 NT_009306 NT_009307 NT_030792
NT_030801 NT_024200 NT_024283 NT_033235 NT_009182 NT_033242 NT_008952 NT_024172
NT_033236 NT_024189 NT_009237 NT_024229 NT_009020 NT_024192 NT_033915 NT_009296
NT_009178 NT_008978 NT_024343 NT_027118 NT_027110 NT_030109 NT_024169 NT_033902
NT_033903 NT_033913 NT_033994 NT_033237 NT_009405 NT_033232 NT_024160 NT_030106
NT_033241 NT_033923 NT_033926 NT_033900 NT_033929 NT_033930 NT_033925 NT_033924
NT_033928 NT_024149 NT_033927 NT_033243 NT_033240 NT_008984 NT_009151 NT_033244
NT_033899 NT_030800 NT_033901


  NT_009296
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009296AC013602489567363RH5211311157.31  11148.801 AC013602
S/G/Y/R/B/O NT_009296AC013602489568823RH5214811161.70  11154.401 AC013602
S/G/Y/R/B/O NT_009296AC013602489589733RH1831311159.48    1 AC013602
S/G/Y/R/B/O NT_009296AC013602489647913RH38076  112072.00  1 AC013602
S/G/Y/R/B/O NT_009296AC013602489648583RH1716811157.31    1 AC013602
S/G/Y/R/B/O NT_009296AC013602489668223RH2747611157.31    1 AC013602
S/G/Y/R/B/O NT_009296AC013602489708463RH4813211167.45    1 AC013602
S/G/Y/R/B/O NT_009296AC013602489830423RH4626811163.76    1 AC013602
S/G/Y/R/B/O NT_009296AC013602489847523RH5225211161.91112072.0011150.201 AC013602
S/G/Y/R/B/O NT_009296AC013602489852223RH4840511157.31    1 AC013602
S/G/Y/R/B/O NT_009296AC024031490537291          
S/G/Y/R/B/O NT_009296AC023340492649361RH6643611153.26    1AC068858, AC092733, AC016702, AC023340, AC068858, AC092733
S/G/Y/R/B/O NT_009296AC023340492651241RH1061811157.82    1AC068858, AC092733, AC016702, AC023340, AC068858, AC092733
S/G/Y/R/B/O NT_009296AC023340492658741RH1841411153.67    1AC068858, AC092733, AC016702, AC023340, AC068858, AC092733
S/G/Y/R/B/O NT_009296AC023340492671561RH5225111160.21  11149.301AC068858, AC092733, AC016702, AC023340, AC068858, AC092733
S/G/Y/R/B/O NT_009296AC023340492732801RH569  112066.00  1AC092733, AC016702, AC092733
S/G/Y/R/B/O NT_009296AC023340492733491RH1372011154.98    1AC068858, AC092733, AC016702, AC023340, AC068858, AC092733
S/G/Y/R/B/O NT_009296AC023340492938881RH8085211168.08    1AC068858, AC092733, AC016702, AC023340, AC068858, AC092733
S/G/Y/R/B/O NT_009296AC068858492205971RH5233411153.26112103.0011149.301AC023340, AC023340, AC068858
S/G/Y/R/B/O NT_009296AC068858492207711RH1823511154.98    1AC023340, AC023340, AC068858
S/G/Y/R/B/O NT_009296AC068858492244241RH9203511154.18    1AC023340, AC023340, AC068858
S/G/Y/R/B/O NT_009296AC092733493716332RH5208811154.98  11148.101AC104241, AC016702, AC092733, AC104241
S/G/Y/R/B/O NT_009296AC092733493717712RH5215211163.97  11144.001 AC092733
S/G/Y/R/B/O NT_009296AC104241493947972RH1553811153.26    1 AC019024
S/G/Y/R/B/O NT_009296AC104010494651492          
S/G/Y/R/B/O NT_009296AC068289496247001RH5218811155.18    1AC087521, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC068289496247001NIB445    11144.801AC087521, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC087521494780482RH3995111151.74    1AC068289, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC087521495522532RH13886  112014.00  1AC068289, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC087521495522722RH4431711151.74    1AC068289, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC087521495568122RH5203211155.18  11146.701AC068289, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC087521495569922RH7809511151.74    1AC068289, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC087521495630392RH9399611155.18    1AC068289, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC087521496100582RH5172711155.18    1AC068289, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC087521496100582SGC33963    11144.901AC068289, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC087521496102322RH1641511155.18    1AC068289, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC087521496160182RH4883211151.74    1AC068289, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC087521496397662RH9388011151.74    1AC068289, AC068289, AC087521
S/G/Y/R/B/O NT_009296AC002554496508283          
S/G/Y/R/B/O NT_009296AC068457498220242RH297611153.21  11146.701 AC068457
S/G/Y/R/B/O NT_009296AC068457498220242RH227  112046.00  1 AC068457
S/G/Y/R/B/O NT_009296AC025533498975631RH2742711151.74    1AC068457, AC025533, AC068457
S/G/Y/R/B/O NT_009296AC025533498975711RH9830511169.25    1AC068457, AC025533, AC068457
S/G/Y/R/B/O NT_009296AC090163499427562RH5226911153.41  11146.702AC019143, AC019149, AC025533, AC019143, AC019149, AC025533, AC090163
S/G/Y/R/B/O NT_009296AC090163499428332RH8055  112060.00  2AC019143, AC019149, AC025533, AC019143, AC019149, AC025533, AC090163
S/G/Y/R/B/O NT_009296AC090163499433532RH4572211166.84    2AC019143, AC019149, AC025533, AC019143, AC019149, AC025533, AC090163
S/G/Y/R/B/O NT_009296AC090163499433632RH7580911162.87    2AC019143, AC019149, AC025533, AC019143, AC019149, AC025533, AC090163
S/G/Y/R/B/O NT_009296AC090163499451582RH5176911153.41    1AC019143, AC019143, AC090163
S/G/Y/R/B/O NT_009296AC090163499451582WI-16566    11146.601AC019143, AC019143, AC090163
S/G/Y/R/B/O NT_009296AC090163499497482RH9244411151.74    2AC019143, AC019149, AC025533, AC019143, AC019149, AC025533, AC090163


  NT_009296 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_009296AC090163499497682RH5191111155.18    2AC019143, AC019149, AC025533, AC019143, AC019149, AC025533, AC090163
S/G/Y/R/B/O NT_009296AC090163499497682WI-17720    11144.802AC019143, AC019149, AC025533, AC019143, AC019149, AC025533, AC090163
S/G/Y/R/B/O NT_009296AC090163499938802WI-4635    11146.601AC019143, AC025533, AC019143, AC025533, AC090163
S/G/Y/R/B/O NT_009296AC019143500019591          
S/G/Y/R/B/O NT_009296AC021170501108881          
S/G/Y/R/B/O NT_009296AC010768503565653RH7596511165.39    1AC104010, AC010768, AC104010
S/G/Y/R/B/O NT_009296AC010768503566643RH4011511155.18    1AC104010, AC010768, AC104010
S/G/Y/R/B/O NT_009296 - RH10279711157.31    1AC016913, AC087442, AC016913, AC087442
S/G/Y/R/B/O NT_009296 - RH7936  112078.00  1AC018716, AC024193, AC018716, AC024193
S/G/Y/R/B/O NT_009296 - WI-4084    11150.200  
S/G/Y/R/B/O NT_009296 - RH10370211159.69    0  
S/G/Y/R/B/O NT_009296 - CHLC.GATA2A01.460    11151.801AC090832, AC090832
S/G/Y/R/B/O NT_009296 - RH1157011160.97    1AC044839, AC044839
S/G/Y/R/B/O NT_009296 - WI-3693    11151.801AC068385, AC068385
S/G/Y/R/B/O NT_009296 - RH1259311159.69    1AC068385, AC068385
S/G/Y/R/B/O NT_009296 - WI-6923    11151.901AC068385, AC068385
S/G/Y/R/B/O NT_009296 - RH1264311157.31    1AC016913, AC087442, AC016913, AC087442
S/G/Y/R/B/O NT_009296 - RH1542711159.69    1AC024475, AC024475
S/G/Y/R/B/O NT_009296 - RH1597711163.64    0  
S/G/Y/R/B/O NT_009296 - RH3995711163.64    0  
S/G/Y/R/B/O NT_009296 - RH4607411159.69    1AC068385, AC090832, AC090833, AC068385, AC090832, AC090833
S/G/Y/R/B/O NT_009296 - RH4895811159.69    1AC068385, AC090832, AC068385, AC090832
S/G/Y/R/B/O NT_009296 - RH5205111152.54    0  
S/G/Y/R/B/O NT_009296 - RH6485111163.76    1AC044839, AC044839
S/G/Y/R/B/O NT_009296 - RH7866911163.76    1AC068385, AC068385
S/G/Y/R/B/O NT_009296 - RH9367611159.69    1AC068385, AC068385