Chromosome 11 - RH Maps - Single Contig

Chromosome 11 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_009407	NT_009308	NT_008953	NT_008937	NT_024164	NT_033238	NT_009368	NT_028310
NT_033239	NT_009325	NT_008957	NT_024194	NT_033233	NT_033231	NT_028309	NT_030795
NT_017854	NT_009062	NT_024163	NT_024275	NT_009038	NT_009306	NT_009307	NT_030792
NT_030801	NT_024200	NT_024283	NT_033235	NT_009182	NT_033242	NT_008952	NT_024172
NT_033236	NT_024189	NT_009237	NT_024229	NT_009020	NT_024192	NT_033915	NT_009296
NT_009178	NT_008978	NT_024343	NT_027118	NT_027110	NT_030109	NT_024169	NT_033902
NT_033903	NT_033913	NT_033994	NT_033237	NT_009405	NT_033232	NT_024160	NT_030106
NT_033241	NT_033923	NT_033926	NT_033900	NT_033929	NT_033930	NT_033925	NT_033924
NT_033928	NT_024149	NT_033927	NT_033243	NT_033240	NT_008984	NT_009151	NT_033244
NT_033899	NT_030800	NT_033901

NT_008952

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_008952	AC079324	26470899	1
S/G/Y/R/B/O	NT_008952	AC025248	26473476	1
S/G/Y/R/B/O	NT_008952	AC021698	26517556	2	RH104178	11	97.53					1	AC079324,	AC021698, AC079324
S/G/Y/R/B/O	NT_008952	AC079064	26652336	3	CHLC.GATA25B04					11	84.50	1	AC025248, AC036114, AC079324,	AC025248, AC036114, AC079064, AC079324
S/G/Y/R/B/O	NT_008952	AC036114	26746518	3	RH102097	11	95.28					1	AC025248,	AC025248, AC036114
S/G/Y/R/B/O	NT_008952	AC036114	26747266	3	RH25812	11	100.24					1	AC025248,	AC025248, AC036114
S/G/Y/R/B/O	NT_008952	AC036114	26747272	3	RH16157	11	97.61					1	AC025248,	AC025248, AC036114
S/G/Y/R/B/O	NT_008952	AC036114	26747562	3	RH78143	11	99.64					1	AC025248,	AC025248, AC036114
S/G/Y/R/B/O	NT_008952	AC036114	26747825	3	RH2118			11	1223.00			1	AC025248,	AC025248, AC036114
S/G/Y/R/B/O	NT_008952	AC036114	26747974	3	RH35938	11	99.64					1	AC025248,	AC025248, AC036114
S/G/Y/R/B/O	NT_008952	AC036114	26752269	3	SGC34286					11	85.10	1	AC025248,	AC025248, AC036114
S/G/Y/R/B/O	NT_008952	AC036114	26752387	3	RH16467	11	99.74					1	AC025248,	AC025248, AC036114
S/G/Y/R/B/O	NT_008952	AC083755	26846079	3	D11S904					11	98.40	1		AC083755
S/G/Y/R/B/O	NT_008952	AC083755	26846079	3	RH13230	11	99.64	11	1210.00			1		AC083755
S/G/Y/R/B/O	NT_008952	AC083755	26850107	3	RH51597	11	99.64			11	98.40	1		AC083755
S/G/Y/R/B/O	NT_008952	AC083755	26850226	3	RH27441	11	97.53					1		AC083755
S/G/Y/R/B/O	NT_008952	AC018531	26970105	2
S/G/Y/R/B/O	NT_008952	AC016450	27106963	3
S/G/Y/R/B/O	NT_008952	AC068107	27182548	3	RH51740	11	102.80			11	96.50	1	AC016450,	AC016450, AC068107
S/G/Y/R/B/O	NT_008952	AC068107	27269346	3	RH52036	11	95.23			11	96.90	1	AC015756, AC016450,	AC015756, AC016450, AC068107
S/G/Y/R/B/O	NT_008952	AC015756	27314331	2	RH103034	11	102.17					1		AC015756
S/G/Y/R/B/O	NT_008952	AC015756	27314392	2	RH67035	11	95.23					1		AC015756
S/G/Y/R/B/O	NT_008952	AC015756	27421208	2	CHLC.GCT8E07					11	90.30	1	AC108922,	AC015756, AC108922
S/G/Y/R/B/O	NT_008952	AC108922	27422110	3
S/G/Y/R/B/O	NT_008952	AC022205	27535478	1	RH92404	11	103.43					1		AC022205, AC090597
S/G/Y/R/B/O	NT_008952	AC022205	27551959	1	RH47720	11	104.55					1		AC022205, AC090597
S/G/Y/R/B/O	NT_008952	AC022205	27579117	1	RH8116			11	1262.00			1		AC022205, AC090597, AF346711
S/G/Y/R/B/O	NT_008952		-		RH48606	11	95.44					1
S/G/Y/R/B/O	NT_008952		-		WI-13781					11	85.50	1	AC107939, AL049713,	AC107939, AL049713, AL356577
S/G/Y/R/B/O	NT_008952		-		WI-15813					11	93.80	1	AC090469, AL049652,	AC087522, AC090469, AL049652
S/G/Y/R/B/O	NT_008952		-		D11S930					11	97.60	2	AC022709, AC048329, AL513530,	AC022709, AC048329, AF438327, AL513530