Chromosome 11 - RH Maps - Single Contig

Chromosome 11 - RH Maps - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_009407	NT_009308	NT_008953	NT_008937	NT_024164	NT_033238	NT_009368	NT_028310
NT_033239	NT_009325	NT_008957	NT_024194	NT_033233	NT_033231	NT_028309	NT_030795
NT_017854	NT_009062	NT_024163	NT_024275	NT_009038	NT_009306	NT_009307	NT_030792
NT_030801	NT_024200	NT_024283	NT_033235	NT_009182	NT_033242	NT_008952	NT_024172
NT_033236	NT_024189	NT_009237	NT_024229	NT_009020	NT_024192	NT_033915	NT_009296
NT_009178	NT_008978	NT_024343	NT_027118	NT_027110	NT_030109	NT_024169	NT_033902
NT_033903	NT_033913	NT_033994	NT_033237	NT_009405	NT_033232	NT_024160	NT_030106
NT_033241	NT_033923	NT_033926	NT_033900	NT_033929	NT_033930	NT_033925	NT_033924
NT_033928	NT_024149	NT_033927	NT_033243	NT_033240	NT_008984	NT_009151	NT_033244
NT_033899	NT_030800	NT_033901

NT_009306

Links	Contig	Accession	Chr Start	Phs	STS Marker	GM Chr	GM99 GB4	WI Chr	WI	G3 Chr	SHGC G3	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_009306	AC005729	16428637	1	CHLC.GATA48E02					11	58.80	1		AC005729
S/G/Y/R/B/O	NT_009306	AC005320	16493789	3	RH17948	11	66.94					1		AC005320
S/G/Y/R/B/O	NT_009306	AC005320	16493789	3	RH32856			11	648.00			1		AC005320
S/G/Y/R/B/O	NT_009306	AC005320	16514816	3	RH14448			11	648.00	11	58.80	1		AC005320
S/G/Y/R/B/O	NT_009306	AC005320	16514816	3	RH52326	11	67.00					1		AC005320
S/G/Y/R/B/O	NT_009306	AC005684	16559448	3	RH45832	11	67.00					1		AC005684
S/G/Y/R/B/O	NT_009306	AC026639	16669536	2	RH75292	11	66.79					1		AC004601, AC026639
S/G/Y/R/B/O	NT_009306	AC026639	16669617	2	RH35799	11	67.00					1		AC004601, AC026639
S/G/Y/R/B/O	NT_009306	AC026639	16679718	2	RH65753	11	66.94					1		AC004601, AC026639
S/G/Y/R/B/O	NT_009306	AC026639	16699384	2	RH103392	11	66.94					1		AC026639
S/G/Y/R/B/O	NT_009306	AC026639	16699387	2	RH75813	11	71.49					1		AC026639
S/G/Y/R/B/O	NT_009306	AC026639	16699510	2	RH93893	11	67.00					1		AC026639
S/G/Y/R/B/O	NT_009306	AC006597	16828844	3	RH102150	11	67.00					1	AC005729,	AC005729, AC006597
S/G/Y/R/B/O	NT_009306	AC006597	16831024	3	RH102427	11	66.94					1		AC006597
S/G/Y/R/B/O	NT_009306	AC006597	16886495	3	WI-16765					11	61.80	1	AC004796,	AC004796, AC006597
S/G/Y/R/B/O	NT_009306	AC006597	16886495	3	RH52325	11	69.06					1	AC004796,	AC004796, AC006597
S/G/Y/R/B/O	NT_009306	AC004796	16914259	3
S/G/Y/R/B/O	NT_009306	AC107956	17005482	2	D11S921					11	60.20	1	AC024240,	AC024240, AC107956
S/G/Y/R/B/O	NT_009306	AC107956	17005482	2	RH715			11	673.00			1	AC024240,	AC024240, AC107956
S/G/Y/R/B/O	NT_009306	AC107956	17005482	2	RH13375	11	71.49					1	AC024240,	AC024240, AC107956
S/G/Y/R/B/O	NT_009306	AC107956	17037114	2	RH45016	11	66.62					1	AC024240,	AC003690, AC024240, AC107956
S/G/Y/R/B/O	NT_009306	AC107956	17086212	2	RH36362	11	64.86					2	AC003692,	AC003692, AC107956
S/G/Y/R/B/O	NT_009306	AC107956	17092414	2	RH40037	11	71.49					2	AC003692,	AC003692, AC107956
S/G/Y/R/B/O	NT_009306	AC024240	17101482	1