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  Chromosome 11 - RH Maps - Single Contig
 

Chromosome 11 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009407 NT_009308 NT_008953 NT_008937 NT_024164 NT_033238 NT_009368 NT_028310
NT_033239 NT_009325 NT_008957 NT_024194 NT_033233 NT_033231 NT_028309 NT_030795
NT_017854 NT_009062 NT_024163 NT_024275 NT_009038 NT_009306 NT_009307 NT_030792
NT_030801 NT_024200 NT_024283 NT_033235 NT_009182 NT_033242 NT_008952 NT_024172
NT_033236 NT_024189 NT_009237 NT_024229 NT_009020 NT_024192 NT_033915 NT_009296
NT_009178 NT_008978 NT_024343 NT_027118 NT_027110 NT_030109 NT_024169 NT_033902
NT_033903 NT_033913 NT_033994 NT_033237 NT_009405 NT_033232 NT_024160 NT_030106
NT_033241 NT_033923 NT_033926 NT_033900 NT_033929 NT_033930 NT_033925 NT_033924
NT_033928 NT_024149 NT_033927 NT_033243 NT_033240 NT_008984 NT_009151 NT_033244
NT_033899 NT_030800 NT_033901


  NT_033923
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033923AC000353664097073RH9869811240.12    2AC051660, AC090591, AP003068, AC000353, AC051660, AC090297, AC090591, AP000490, AP003068
S/G/Y/R/B/O NT_033923AC000353664839643RH7937  112851.00  1 AC000353, AC090297, AC090390, AP000483, AP000828, AP000944
S/G/Y/R/B/O NT_033923AC000353664839943RH1741411240.19    1 AC000353, AC090297, AC090390, AP000483, AP000828, AP000944
S/G/Y/R/B/O NT_033923AC000353664840353RH9853911240.12    1 AC000353, AC090297, AC090390, AP000483, AP000828, AP000944
S/G/Y/R/B/O NT_033923AC000353665086153RH3667211245.97    1 AC000353, AC090297, AC090390, AP000828
S/G/Y/R/B/O NT_033923AC000353665088273RH1195111239.91    1 AC000353, AC090297, AC090390, AP000483, AP000828, AP000944, AP001279
S/G/Y/R/B/O NT_033923AC000353665394063RH2745911247.35    2AL137222, AC000353, AC074242, AC090297, AC090390, AL137222, AP000483, AP000828, AP000944, AP001279
S/G/Y/R/B/O NT_033923AC000353665399043RH4588211248.60    1 AC000353, AC090297, AC090390, AP000483, AP000828, AP000944, AP001279
S/G/Y/R/B/O NT_033923AC000353665438723RH32108  112842.0011336.601 AP000944
S/G/Y/R/B/O NT_033923AC000353665438723RH5194411247.74    1 AP000944
S/G/Y/R/B/O NT_033923AC000353666107613RH1785411237.80    1 AC000353, AC090390, AP000441, AP000944
S/G/Y/R/B/O NT_033923AC000353666108773SGC33927    11338.401 AC000353, AC090390, AP000441, AP000944
S/G/Y/R/B/O NT_033923AC000353666108773RH5235111250.41    1 AC000353, AC090390, AP000441, AP000944
S/G/Y/R/B/O NT_033923AC000353666111213RH3606811240.12    1 AC000353, AC090390, AP000441, AP000944
S/G/Y/R/B/O NT_033923AC000353666128433RH1098011237.96    1 AC000353, AC090390, AP000441, AP000944
S/G/Y/R/B/O NT_033923AC000353666129173RH1815  112864.00  1 AC000353, AC090390, AP000441, AP000944
S/G/Y/R/B/O NT_033923AC000353666149343WI-12334    11339.901 AC000353, AC090390, AP000441, AP000944
S/G/Y/R/B/O NT_033923AC000353666149343RH5192211249.53    1 AC000353, AC090390, AP000441, AP000944
S/G/Y/R/B/O NT_033923AC000353666151373RH1733511243.04    1 AC000353, AC090390, AP000441, AP000944
S/G/Y/R/B/O NT_033923AC000353666192643SGC30381    11327.101 AC000353, AC090390, AP000441
S/G/Y/R/B/O NT_033923AC000353666192643RH5167711240.19    1 AC000353, AC090390, AP000441
S/G/Y/R/B/O NT_033923AC000353666224583RH6849111237.91    1AP000769, AC000353, AC090390, AP000441, AP000769, AP000944
S/G/Y/R/B/O NT_033923AC000353666258723RH1745711240.12    1AP000769, AC000353, AC090390, AP000441, AP000769, AP000944
S/G/Y/R/B/O NT_033923AC000353666268243RH1727411238.49    1AP000769, AC000353, AC090390, AP000441, AP000769, AP000944
S/G/Y/R/B/O NT_033923AP000769666856863RH1252911240.12    1 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666860103RH2827611247.35    1 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666869523RH1756611237.80    1 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666876013WI-12191    11327.601 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666876013RH5172411247.64    1 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666877733RH6748411237.96    1 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666883953RH2828311252.21    1 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666892973RH4008111237.96    1 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666893983SGC35161    11328.001 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666893983RH5179711240.12    1 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666898653RH6969411237.80    1 AP000803
S/G/Y/R/B/O NT_033923AP000769666903403RH2844711251.18    1 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666909343SGC30658    11338.201 AF203815, AP000579, AP000769, AP000803
S/G/Y/R/B/O NT_033923AP000769666909343RH5234411249.53    1 AF203815, AP000579, AP000769, AP000803
S/G/Y/R/B/O NT_033923AP000769666913653SGC35206    11327.101 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666913653RH5195211239.91    1 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666915713RH8163  112877.00  1 AF203815, AP000579, AP000769, AP000803
S/G/Y/R/B/O NT_033923AP000769666918033RH14602  112881.0011327.301 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666918033RH5197411247.35    1 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769666924553RH1699511237.80    1 AF203815, AP000579, AP000769, AP001459
S/G/Y/R/B/O NT_033923AP000769666928513RH4200111240.12    1 AF203815, AP000579, AP000769, AP000803, AP001459
S/G/Y/R/B/O NT_033923AP000769667125673RH7867811240.19    1 AF255613, AP000579, AP000769, AP000803, AP001362, AP001459
S/G/Y/R/B/O NT_033923AP000769667248703RH6576411247.67    1 AP000441, AP000579, AP000769, AP000803, AP001362
S/G/Y/R/B/O NT_033923AP000769667254093WI-15382    11327.401 AP000441, AP000769
S/G/Y/R/B/O NT_033923AP000769667254093RH5209911247.14    1 AP000441, AP000769
S/G/Y/R/B/O NT_033923 - RH1603811252.15    0 AP000485, AP001319


  NT_033923 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033923 - RH14831  112873.00  0 AP000631, AP001266, AP001444
S/G/Y/R/B/O NT_033923 - WI-17347    11327.600 AC022488, AP001266, AP001362, AP001444
S/G/Y/R/B/O NT_033923 - RH2731111251.61    0 AP000485, AP001319
S/G/Y/R/B/O NT_033923 - WI-14316    11328.200 AP001107
S/G/Y/R/B/O NT_033923 - RH4009611251.39    0 AC018798, AP003176
S/G/Y/R/B/O NT_033923 - IB1075    11328.700 AC009470, AP000677, AP001191, AP001201, AP001266, AP001920
S/G/Y/R/B/O NT_033923 - RH4183211251.39    0 AC019220, AP000481, AP001157, AP001385
S/G/Y/R/B/O NT_033923 - WI-17527    11329.500 AP000631, AP001266, AP001444
S/G/Y/R/B/O NT_033923 - RH4191711251.61    0 AC019220, AP000481, AP000671, AP001100, AP001157, AP001385
S/G/Y/R/B/O NT_033923 - D11S913    11332.201AC008102, AC008102, AC025132, AP000822, AP001812
S/G/Y/R/B/O NT_033923 - RH4490511251.61    0 AC027270, AC068055, AP001107, AP002748
S/G/Y/R/B/O NT_033923 - WI-7741    11335.801AP003554, AP003554
S/G/Y/R/B/O NT_033923 - RH4787011251.45    0 AC027270, AP002748
S/G/Y/R/B/O NT_033923 - SGC31923    11335.800 AC009470, AF250392, AP000677, AP001191, AP001201, AP001920
S/G/Y/R/B/O NT_033923 - RH4813911251.18    0 AC009470, AP000677, AP001266, AP001444
S/G/Y/R/B/O NT_033923 - WI-18484    11335.800 AC009470, AP000677, AP001191, AP001201, AP001266, AP001920
S/G/Y/R/B/O NT_033923 - RH5194911251.23    1AC004770, AC004228, AC004770, AP000591, AP002380, U73629
S/G/Y/R/B/O NT_033923 - SGC35223    11335.801AC000134, AC090316, AP001558, Y12335, AC000134, AC090316, AC090368, AC091082, AJ000052, AP000575, AP000928, AP001462, AP001558, Y12335
S/G/Y/R/B/O NT_033923 - RH5199111251.39    0 AC019220, AP000671, AP001100, AP001157, AP001319, AP001385
S/G/Y/R/B/O NT_033923 - WI-16754    11336.100 AP000803, AP001362, AP001459
S/G/Y/R/B/O NT_033923 - RH5215711251.39    0 AC019220, AP000481, AP000671, AP001100, AP001157, AP001385
S/G/Y/R/B/O NT_033923 - WI-18813    11336.201AC000134, AC090316, AP001558, Y12335, AC000134, AC090316, AC090368, AC091082, AP000575, AP000928, AP001462, AP001558, Y12335
S/G/Y/R/B/O NT_033923 - RH5223811251.39    1 AC019220, AP000481, AP000671, AP001100, AP001157, AP001385
S/G/Y/R/B/O NT_033923 - WI-16915    11336.201AP003554, AC005848, AP003554
S/G/Y/R/B/O NT_033923 - RH8048111251.45    1AC087681, AP001458, AC087681, AC090232, AC090306, AC090702, AP001458, AP001857
S/G/Y/R/B/O NT_033923 - WI-6315    11336.200 AC025132, AP001201
S/G/Y/R/B/O NT_033923 - IB3011    11336.300 AP001266, AP001362, AP001444
S/G/Y/R/B/O NT_033923 - WI-17663    11336.900 AC009470, AP000677, AP001191, AP001201, AP001285, AP001920
S/G/Y/R/B/O NT_033923 - WI-6383    11336.900 AP001266
S/G/Y/R/B/O NT_033923 - SGC31567    11337.601AC051660, AC051660, AP000828
S/G/Y/R/B/O NT_033923 - SGC34590    11338.400 AP000630, AP001107, AP001812
S/G/Y/R/B/O NT_033923 - WI-19549    11338.800 AC019220, AP001157, AP001385
S/G/Y/R/B/O NT_033923 - WI-8671    11339.201AC090391, AP000573, AP001453, AC005848, AC090391, AP000573, AP001453