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  Chromosome 11 - RH Maps - Single Contig
 

Chromosome 11 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009407 NT_009308 NT_008953 NT_008937 NT_024164 NT_033238 NT_009368 NT_028310
NT_033239 NT_009325 NT_008957 NT_024194 NT_033233 NT_033231 NT_028309 NT_030795
NT_017854 NT_009062 NT_024163 NT_024275 NT_009038 NT_009306 NT_009307 NT_030792
NT_030801 NT_024200 NT_024283 NT_033235 NT_009182 NT_033242 NT_008952 NT_024172
NT_033236 NT_024189 NT_009237 NT_024229 NT_009020 NT_024192 NT_033915 NT_009296
NT_009178 NT_008978 NT_024343 NT_027118 NT_027110 NT_030109 NT_024169 NT_033902
NT_033903 NT_033913 NT_033994 NT_033237 NT_009405 NT_033232 NT_024160 NT_030106
NT_033241 NT_033923 NT_033926 NT_033900 NT_033929 NT_033930 NT_033925 NT_033924
NT_033928 NT_024149 NT_033927 NT_033243 NT_033240 NT_008984 NT_009151 NT_033244
NT_033899 NT_030800 NT_033901


  NT_024229
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_024229AC026062358655591RH8091811133.72    1 AC026062
S/G/Y/R/B/O NT_024229AC026062359164381GCT16F07    11126.001 AC026062
S/G/Y/R/B/O NT_024229AC061999359478171RH5189611134.18  11126.101AC026062, AC026062, AC061999
S/G/Y/R/B/O NT_024229AC061999359480281RH3998711135.55    1AC026062, AC026062, AC061999
S/G/Y/R/B/O NT_024229AC061999359510431RH2731611135.55    1AC026062, AC026062, AC061999
S/G/Y/R/B/O NT_024229AC061999359537351RH74634  111760.00  1 AC061999
S/G/Y/R/B/O NT_024229AC009656360383261RH5234711134.23  11124.301AC061999, AC009656, AC061999
S/G/Y/R/B/O NT_024229AC009656360434381RH5213511134.23  11120.901AC061999, AC009656, AC061999
S/G/Y/R/B/O NT_024229AC009656360554231RH31177  111750.00  1 AC009656
S/G/Y/R/B/O NT_024229AC009656360623721RH7991  111745.00  1AC061999, AC009656, AC061999
S/G/Y/R/B/O NT_024229AC009656360747291RH5192511134.23  11120.901AC061999, AC009656, AC061999
S/G/Y/R/B/O NT_024229AC087277361802422WI-5256    11122.701AC009656, AC016754, AC009656, AC016754, AC087277
S/G/Y/R/B/O NT_024229AC087277362543372RH2746211134.23    1AC016754, AC016754, AC087277
S/G/Y/R/B/O NT_024229AC087277362543662RH6487011134.23    1AC016754, AC016754, AC087277
S/G/Y/R/B/O NT_024229AC016754362099711          
S/G/Y/R/B/O NT_024229AC073412405586321RH4548011133.42    1 AC073412
S/G/Y/R/B/O NT_024229AC104042363448082          
S/G/Y/R/B/O NT_024229AC068281363933621          
S/G/Y/R/B/O NT_024229AC079073363978662RH4268711135.55111773.00  1AC068281, AC068281, AC079073
S/G/Y/R/B/O NT_024229AC079326365701111          
S/G/Y/R/B/O NT_024229AC022632365986031          
S/G/Y/R/B/O NT_024229AC091097366104462          
S/G/Y/R/B/O NT_024229AC021694367729613          
S/G/Y/R/B/O NT_024229AC087174370575163RH751662286.63    2AC016480, AL445237, AC016480, AC064820, AC069334, AC087174, AL445237
S/G/Y/R/B/O NT_024229AC016480370633241          
S/G/Y/R/B/O NT_024229AC079914372007141WI-6096    11126.001AC021761, AC021761, AC079914
S/G/Y/R/B/O NT_024229AC021761372047643          
S/G/Y/R/B/O NT_024229AC061997373640211WI-5872    11127.601 AC061997
S/G/Y/R/B/O NT_024229AC024176373862161          
S/G/Y/R/B/O NT_024229AC022209374833153          
S/G/Y/R/B/O NT_024229AC103798376880893AFM206YC9P    11129.201 AC103798
S/G/Y/R/B/O NT_024229AC103798377280403RH4510111134.18    1AC024176, AC024176, AC103798
S/G/Y/R/B/O NT_024229AC090538377753243          
S/G/Y/R/B/O NT_024229AC021829378875732          
S/G/Y/R/B/O NT_024229AC011942380315143          
S/G/Y/R/B/O NT_024229AC021713381500902          
S/G/Y/R/B/O NT_024229AC022796382967373          
S/G/Y/R/B/O NT_024229AC027157384158473GCT16B10    11132.501 AC016077, AC027157
S/G/Y/R/B/O NT_024229AC027157384386083RH9186611139.44    1 AC016077, AC027157
S/G/Y/R/B/O NT_024229AC068185385249713          
S/G/Y/R/B/O NT_024229AC009866386502342          
S/G/Y/R/B/O NT_024229AC021723387510793          
S/G/Y/R/B/O NT_024229AC024244388845181          
S/G/Y/R/B/O NT_024229AC104947388995292          
S/G/Y/R/B/O NT_024229AC087378390653981          
S/G/Y/R/B/O NT_024229AC026081390719931          
S/G/Y/R/B/O NT_024229AC026269390794131          
S/G/Y/R/B/O NT_024229AC090637392376281RH31423  181701.00  2AC015959, AC021763, AP001379, AC015959, AC021763, AC090637, AP001379
S/G/Y/R/B/O NT_024229AL136146392785563RH31175  111698.00  1AC026269, AC026269
S/G/Y/R/B/O NT_024229AL136146393072113RH305511132.82  11120.201 AL136146


  NT_024229 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_024229AC090692393405781          
S/G/Y/R/B/O NT_024229AC053528394526181          
S/G/Y/R/B/O NT_024229AL158219394558423          
S/G/Y/R/B/O NT_024229AC026970394558611          
S/G/Y/R/B/O NT_024229AC092767394981152RH5212511133.79  11119.501AC026970, AC053528, AC090637, AC090692, AC026970, AC053528, AC087812, AC090637, AC090692, AC092767
S/G/Y/R/B/O NT_024229AC092767394990052RH6523811131.82    1AC026970, AC053528, AC090637, AC090692, AC026970, AC053528, AC087812, AC090637, AC090692, AC092767
S/G/Y/R/B/O NT_024229AC092767394998932RH6498111131.82    1AC026970, AC053528, AC090637, AC090692, AC026970, AC053528, AC087812, AC090637, AC090692, AC092767
S/G/Y/R/B/O NT_024229AC092767395009582RH5177911131.80    1AC026970, AC090692, AC026970, AC087812, AC090692, AC092767
S/G/Y/R/B/O NT_024229AC092767395009582WI-12351    11119.201AC026970, AC090692, AC026970, AC087812, AC090692, AC092767
S/G/Y/R/B/O NT_024229AC092767395017612RH2845611131.80    1AC053528, AC090637, AC090692, AC053528, AC087812, AC090637, AC090692, AC092767
S/G/Y/R/B/O NT_024229AL137863395294593          
S/G/Y/R/B/O NT_024229AL138812395638963          
S/G/Y/R/B/O NT_024229AL135934396886183RH3635411131.82    1 AC013362, AC016801, AC067845, AC090467, AL135934
S/G/Y/R/B/O NT_024229AL354921397697603          
S/G/Y/R/B/O NT_024229AC090625398691973          
S/G/Y/R/B/O NT_024229AL133330399870203RH6537611131.52    1AC090625, AC090625, AL133330, AL133389
S/G/Y/R/B/O NT_024229AL133330400482683RH2734611131.32    1 AL133330
S/G/Y/R/B/O NT_024229AL133330400529433RH1316  111671.00  1 AL133330
S/G/Y/R/B/O NT_024229AL133330400533923RH6498411130.21    1 AL133330
S/G/Y/R/B/O NT_024229AL133330400540783RH8939  111683.00  1 AL133330
S/G/Y/R/B/O NT_024229AL133330400547083RH5160011130.26  11116.001 AL133330
S/G/Y/R/B/O NT_024229AL133330400547743RH1694911137.98    1 AL133330
S/G/Y/R/B/O NT_024229AL133330400547843RH2744211131.70    1 AL133330
S/G/Y/R/B/O NT_024229AL133330400565863RH2747711131.70    1 AL133330
S/G/Y/R/B/O NT_024229AL133330400576543RH1055811130.21    1 AL133330
S/G/Y/R/B/O NT_024229AL133330400577723RH1174111130.21    1 AL133330
S/G/Y/R/B/O NT_024229AL133330400768203RH3597511130.16    1 AL133330
S/G/Y/R/B/O NT_024229AL133330400768813RH3617611130.21    1 AL133330
S/G/Y/R/B/O NT_024229AL133330400777973RH6989511130.21    1 AL133330
S/G/Y/R/B/O NT_024229AL133330400787513RH4000411131.70    1 AL133330
S/G/Y/R/B/O NT_024229AL133330400791433RH6889811131.39    1 AL133330
S/G/Y/R/B/O NT_024229AL133330400797163RH2732611131.70    1 AL133330
S/G/Y/R/B/O NT_024229AL133330401031843RH10315811130.21    1 AL133330
S/G/Y/R/B/O NT_024229AL133330401032043RH3993611130.21    1 AL133330
S/G/Y/R/B/O NT_024229AL133330401396703AFM283WH9    11117.501 AL133330
S/G/Y/R/B/O NT_024229AL136989401408763          
S/G/Y/R/B/O NT_024229AL356215401467293          
S/G/Y/R/B/O NT_024229AL138810403133763RH2518811131.02    1 AC090418, AJ298105, AL138810
S/G/Y/R/B/O NT_024229AL138810403145343RH2712411131.29    1 AC090418, AJ298105, AL138810, AL157891
S/G/Y/R/B/O NT_024229AL138810404188393RH5230911131.70    2AC011006, AC087661, AC107928, AC011006, AC087661, AC107928, AJ298105, AL138810, AL157891
S/G/Y/R/B/O NT_024229AL138810404188393WI-20739    11117.602AC011006, AC087661, AC107928, AC011006, AC087661, AC107928, AJ298105, AL138810, AL157891
S/G/Y/R/B/O NT_024229AC021749404254901          
S/G/Y/R/B/O NT_024229AC021984404907711          
S/G/Y/R/B/O NT_024229AC027806405802912          
S/G/Y/R/B/O NT_024229AC103873408883583AFMB327XH9    11140.402AC103870, AC103870, AC103873, AC108692
S/G/Y/R/B/O NT_024229AC103870409249892          
S/G/Y/R/B/O NT_024229 - SGC31880    11137.900