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  Chromosome 11 - RH Maps - Single Contig
 

Chromosome 11 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_009407 NT_009308 NT_008953 NT_008937 NT_024164 NT_033238 NT_009368 NT_028310
NT_033239 NT_009325 NT_008957 NT_024194 NT_033233 NT_033231 NT_028309 NT_030795
NT_017854 NT_009062 NT_024163 NT_024275 NT_009038 NT_009306 NT_009307 NT_030792
NT_030801 NT_024200 NT_024283 NT_033235 NT_009182 NT_033242 NT_008952 NT_024172
NT_033236 NT_024189 NT_009237 NT_024229 NT_009020 NT_024192 NT_033915 NT_009296
NT_009178 NT_008978 NT_024343 NT_027118 NT_027110 NT_030109 NT_024169 NT_033902
NT_033903 NT_033913 NT_033994 NT_033237 NT_009405 NT_033232 NT_024160 NT_030106
NT_033241 NT_033923 NT_033926 NT_033900 NT_033929 NT_033930 NT_033925 NT_033924
NT_033928 NT_024149 NT_033927 NT_033243 NT_033240 NT_008984 NT_009151 NT_033244
NT_033899 NT_030800 NT_033901


  NT_033901
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033901AP0046061319835391          
S/G/Y/R/B/O NT_033901AP0043691319917561          
S/G/Y/R/B/O NT_033901AP0048341320009091          
S/G/Y/R/B/O NT_033901AC0234741320322581          
S/G/Y/R/B/O NT_033901AP0019791320978121          
S/G/Y/R/B/O NT_033901AP0037761321334021          
S/G/Y/R/B/O NT_033901AC0257391322851861          
S/G/Y/R/B/O NT_033901AC0843321323710321          
S/G/Y/R/B/O NT_033901AP0028341324127521          
S/G/Y/R/B/O NT_033901AC0234761324130681          
S/G/Y/R/B/O NT_033901AP0009111324425993RH31217  115989.00  1AC023474, AP001979, AP002834, AC023474, AP000911, AP001979, AP002834
S/G/Y/R/B/O NT_033901AP0009111325354333RH5173511441.23  11609.701AC023476, AC023476, AP000847, AP000861, AP000910, AP000911
S/G/Y/R/B/O NT_033901AP0009111326162413AFM193YH2    11609.201 AP000661, AP000847, AP000861, AP000910, AP000911
S/G/Y/R/B/O NT_033901AP0017751326442303RH5199711433.88116009.0011600.901 AP000661, AP000847, AP001775, AP001785
S/G/Y/R/B/O NT_033901AP0017751326460683RH5200611431.56  11599.501 AP000661, AP000847, AP001775, AP001785
S/G/Y/R/B/O NT_033901AP0017751326461393RH2666211431.56    1 AP000661, AP000847, AP001775, AP001785
S/G/Y/R/B/O NT_033901AP0017751326472723RH1743311431.56    1 AC018780, AP000661, AP000847, AP001775, AP001785
S/G/Y/R/B/O NT_033901AP0017751326773213RH7018911431.56    1 AC018780, AP000847, AP001775, AP001785
S/G/Y/R/B/O NT_033901AP0017751326773213RH33304  115996.00  1 AC018780, AP000847, AP001775, AP001785
S/G/Y/R/B/O NT_033901AP0017751326793503RH31216  116009.00  1 AC018780, AP000847, AP001775, AP001785
S/G/Y/R/B/O NT_033901AP0008591327401753RH2575711433.88    1 AC018780, AP000859, AP001785
S/G/Y/R/B/O NT_033901AP0008591327404193RH1223811433.88    1 AC018780, AP000859, AP001785
S/G/Y/R/B/O NT_033901AP0008591327421223RH2523611437.49    1 AC018780, AP000859, AP001785
S/G/Y/R/B/O NT_033901AP0008591327487523RH5166011439.61  11606.001 AC018780, AP000859
S/G/Y/R/B/O NT_033901AP0008591327583723RH4001111431.56    1 AC018780, AP000859, AP001785
S/G/Y/R/B/O NT_033901AP0008591327600253RH1149411431.56    1 AC018780, AP000859, AP001785
S/G/Y/R/B/O NT_033901AP0008591327601013RH5194311433.88  11600.901 AC018780, AP000859, AP001785
S/G/Y/R/B/O NT_033901AP0008591327797303RH5228811435.93  11602.501 AC013591, AP000859, AP001785
S/G/Y/R/B/O NT_033901AP0039711328706123RH5166611439.83  11606.201AP004608, AC013591, AP003971, AP004608
S/G/Y/R/B/O NT_033901AP0039711328731403RH5181011435.93  11602.501AP004608, AC013591, AP003971, AP004608
S/G/Y/R/B/O NT_033901AP0039711328733783RH5215011437.91  11604.301AP004608, AC013591, AP003971, AP004608
S/G/Y/R/B/O NT_033901AP0039711328742233RH3674211446.27    1AP004608, AC013591, AP003971, AP004608
S/G/Y/R/B/O NT_033901AP0046081329740441          
S/G/Y/R/B/O NT_033901AP0045501330015333          
S/G/Y/R/B/O NT_033901AP0019991331199983          
S/G/Y/R/B/O NT_033901AC0341621332753361          
S/G/Y/R/B/O NT_033901AP0030501332825451          
S/G/Y/R/B/O NT_033901AP0008041333074221          
S/G/Y/R/B/O NT_033901AP0030621333248293          
S/G/Y/R/B/O NT_033901AC0222081334944841          
S/G/Y/R/B/O NT_033901AP0047821336056631          
S/G/Y/R/B/O NT_033901AP0039681336113561          
S/G/Y/R/B/O NT_033901AC0111541336322561          
S/G/Y/R/B/O NT_033901AC0191231336441711          
S/G/Y/R/B/O NT_033901AP0009031338494913          
S/G/Y/R/B/O NT_033901AP0039721339005453RH4819711435.31    1AP001110, AP001110, AP003972
S/G/Y/R/B/O NT_033901AP0039721339111463RH5198411437.49  11607.901AP001110, AP001110, AP003972
S/G/Y/R/B/O NT_033901AP0039721339768133RH1349811432.57    1 AP003972
S/G/Y/R/B/O NT_033901AP0039721339768133RH971  115913.00  1 AP003972
S/G/Y/R/B/O NT_033901AP0011101340692991          


  NT_033901 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033901 - RH1193811442.77    0  
S/G/Y/R/B/O NT_033901 - RH1199011437.07    1AP000832, AP000843, AP000912, AP000832, AP000843, AP000912
S/G/Y/R/B/O NT_033901 - RH1631311435.51    0  
S/G/Y/R/B/O NT_033901 - RH5173111437.70    1AP000832, AP000843, AP000912, AP000832, AP000843, AP000912
S/G/Y/R/B/O NT_033901 - RH5184411444.22  11606.501AC010583, AP000853, AP003483, AC010583, AP000853, AP003483
S/G/Y/R/B/O NT_033901 - SGC31070    11606.801AP000844, AP002831, AP000762, AP000844, AP002831
S/G/Y/R/B/O NT_033901 - WI-11842    11608.301AP000751, AP000751, AP001265
S/G/Y/R/B/O NT_033901 - RH5201511443.44  11609.000  
S/G/Y/R/B/O NT_033901 - RH5217111435.62    1AC019227, AC021672, AP001183, AC019227, AC021672, AP001183
S/G/Y/R/B/O NT_033901 - RH5234911444.00  11612.201AP000824, AP003486, AP000824, AP001890, AP003486
S/G/Y/R/B/O NT_033901 - RH9841311437.49    1AC090284, AP003784, AC084739, AC090284, AP003784
S/G/Y/R/B/O NT_033901 - RH9911611435.51    0