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  Chromosome 15 - RH Maps - Single Contig
 

Chromosome 15 - RH Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_010362 NT_024668 NT_033275 NT_033278 NT_033279 NT_010346 NT_010178 NT_026446
NT_030829 NT_024683 NT_010280 NT_024666 NT_010221 NT_010363 NT_024680 NT_033266
NT_010344 NT_030828 NT_010194 NT_010289 NT_010342 NT_010351 NT_024653 NT_010265
NT_033272 NT_010222 NT_010332 NT_033270 NT_010376 NT_010298 NT_010374 NT_024703
NT_024654 NT_029450 NT_019601 NT_010249 NT_033267 NT_010356 NT_010343 NT_024674
NT_033271 NT_024670 NT_033269 NT_033276 NT_033277 NT_010352 NT_024651 NT_010274


  NT_010356
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010356AC091167805395451RH475486532.71    5AC058820, AC069587, AL138721, AL596448, AP001324, AC011686, AC058820, AC069587, AC091167, AL138721, AL513214, AL596448, AP001324
S/G/Y/R/B/O NT_010356AC091167805714241RH5415815322.00  15338.901AC058820, AC058820, AC091167
S/G/Y/R/B/O NT_010356AC091167805715211RH1720915323.01    1AC058820, AC058820, AC091167
S/G/Y/R/B/O NT_010356AC091167805876521RH5401315321.93  15338.901AC058820, AC058820, AC091167
S/G/Y/R/B/O NT_010356AC091167806133801RH5405215322.10  15338.901AC058820, AC058820, AC091167
S/G/Y/R/B/O NT_010356AC091167806135561RH6526615321.93    1AC058820, AC058820, AC091167
S/G/Y/R/B/O NT_010356AC091167806136271RH2497315322.10    1AC058820, AC058820, AC091167
S/G/Y/R/B/O NT_010356AC091167806190771RH5415315323.01  15341.501AC016353, AC058820, AC016353, AC058820, AC091167
S/G/Y/R/B/O NT_010356AC058820804916701          
S/G/Y/R/B/O NT_010356AC016353806418381          
S/G/Y/R/B/O NT_010356AC018946807976442RH4488515321.93    1AC004587, AC027478, AC004587, AC006411, AC018946, AC027478
S/G/Y/R/B/O NT_010356AC018946808287512GCT14H07    15340.501AC004587, AC027478, AC004587, AC018946, AC027478
S/G/Y/R/B/O NT_010356AC004587808417433RH14110  153348.00  1 AC004587
S/G/Y/R/B/O NT_010356AC004587808434713RH7845615323.01    1 AC004587
S/G/Y/R/B/O NT_010356AC004587808435533RH1782515323.01    1 AC004587
S/G/Y/R/B/O NT_010356AC027478808439611          
S/G/Y/R/B/O NT_010356AC108451808600862RH9280915283.80    1 AC108451
S/G/Y/R/B/O NT_010356AC108451812523502CHLC.GATA89D04    15307.401 AC108451
S/G/Y/R/B/O NT_010356AC108451813200862RH4481815283.73    1AC108450, AC108450, AC108451
S/G/Y/R/B/O NT_010356AC108451813220952RH6636015282.81    1AC108450, AC108450, AC108451
S/G/Y/R/B/O NT_010356AC108451813221982RH7523615283.63    1AC108450, AC108450, AC108451
S/G/Y/R/B/O NT_010356AC108451813222442RH2843215283.73    1AC108450, AC108450, AC108451
S/G/Y/R/B/O NT_010356AC108451813261462WI-5929    15307.001AC108450, AC108450, AC108451
S/G/Y/R/B/O NT_010356AC016705809270353RH4862715282.91    1AC027478, AC108451, AC016705, AC027478, AC108451
S/G/Y/R/B/O NT_010356AC016705809836983RH10392615279.67    1 AC016705
S/G/Y/R/B/O NT_010356AC012337810403383          
S/G/Y/R/B/O NT_010356AC087761811590823RH3954915276.01    1AC012337, AC010074, AC012337, AC087761
S/G/Y/R/B/O NT_010356AC087761811624513RH1707015275.78    1AC012337, AC010074, AC012337, AC087761, AL109671
S/G/Y/R/B/O NT_010356AC087761811624733RH1029715282.76    1AC012337, AC010074, AC012337, AC087761, AL109671
S/G/Y/R/B/O NT_010356AC087761811944253RH7663115281.99    1AC012337, AC010074, AC012337, AC087761
S/G/Y/R/B/O NT_010356AC087761811945133RH7777915275.78    1AC012337, AC010074, AC012337, AC087761
S/G/Y/R/B/O NT_010356AC087761812202073RH9437315282.71    2AC069320, AC092701, AC010074, AC069320, AC087761, AC092701
S/G/Y/R/B/O NT_010356AC087761812251943RH5403715281.92  15306.802AC092701, AC010074, AC092701
S/G/Y/R/B/O NT_010356AC108450812574152          
S/G/Y/R/B/O NT_010356AC023302814802062RH5422615288.17  15305.901AC027808, AC023302, AC027808
S/G/Y/R/B/O NT_010356AC027808815563913WI-1943    15305.901 AC027808
S/G/Y/R/B/O NT_010356AC027808816188583RH5422915285.64152898.0015304.201 AC027808
S/G/Y/R/B/O NT_010356AC027808816219453RH7926215287.76    1 AC027808
S/G/Y/R/B/O NT_010356AC027808816760933RH6985715289.42    1AC068870, AC027808, AC068870
S/G/Y/R/B/O NT_010356AC027808816765423RH10323515288.59    1AC068870, AC027808, AC068870
S/G/Y/R/B/O NT_010356AC068870817011531RH2530915287.76    1 AC068870
S/G/Y/R/B/O NT_010356AC068870817014921RH1744415290.46    1 AC068870
S/G/Y/R/B/O NT_010356AC068870817031821RH5400615288.70  15310.101 AC068870
S/G/Y/R/B/O NT_010356AC068870817157881RH5438315287.73  15308.401 AC068870
S/G/Y/R/B/O NT_010356AC068870817267751RH10192615285.44    1 AC068870
S/G/Y/R/B/O NT_010356AC068870817303241RH6669115290.46    1 AC068870
S/G/Y/R/B/O NT_010356AC036196817968821          
S/G/Y/R/B/O NT_010356AC103858820267873RH5441215285.54  15306.401 AC103858, AF077011
S/G/Y/R/B/O NT_010356AC103858820342153RH6957815288.90    1 AC103858, AF077011
S/G/Y/R/B/O NT_010356AC103858820342943RH5423015290.46152893.0015310.101 AC103858


  NT_010356 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010356AC103858820343493RH3946715290.46    1 AC103858, AF077011
S/G/Y/R/B/O NT_010356AC103858820378453SGC31977    15310.201AC109809, AC103858, AC109809
S/G/Y/R/B/O NT_010356AC103858820382923RH7657915288.80    1AC109809, AC103858, AC109809
S/G/Y/R/B/O NT_010356AC103858820391873RH5443215285.84  15302.701AC109809, AC103858, AC109809
S/G/Y/R/B/O NT_010356AC103858820684353RH3952415290.46    1AC109809, AC103858, AC109809
S/G/Y/R/B/O NT_010356AC109809821270833RH4789315285.64    1 AC109809
S/G/Y/R/B/O NT_010356AC060809821539073          
S/G/Y/R/B/O NT_010356AC023034823859563RH2654215285.64    2AC058811, AC058811, AC104041, AC104041, AC023034, AC058811, AC058811, AC104041, AC104041
S/G/Y/R/B/O NT_010356AC104041824318213RH2654215285.64    2AC023034, AC058811, AC058811, AC023034, AC058811, AC058811, AC104041, AC104041
S/G/Y/R/B/O NT_010356AC104041824916783RH5443815288.59  15310.201AC103976, AC103976, AC104041
S/G/Y/R/B/O NT_010356AC104041824917463RH9351815290.46    1AC103976, AC103976, AC104041
S/G/Y/R/B/O NT_010356AC103976825356302          
S/G/Y/R/B/O NT_010356AC025219825747971RH5427715290.46152906.0015307.801AC103976, AC025219, AC103976
S/G/Y/R/B/O NT_010356AC025219826373981RH384915285.64  15305.901AC103976, AC025219, AC103976
S/G/Y/R/B/O NT_010356AC025219826611431RH10257615285.74    1 AC025219
S/G/Y/R/B/O NT_010356AC026956827674342RH10294915287.73    1AC037480, AC026956, AC037480
S/G/Y/R/B/O NT_010356AC026956827681782RH9296615285.64    1AC037480, AC026956, AC037480
S/G/Y/R/B/O NT_010356AC037480845844941RH4899815293.10152929.00  1 AC037480
S/G/Y/R/B/O NT_010356AC037480845983731RH5425015293.20  15311.701 AC037480
S/G/Y/R/B/O NT_010356AC037480845983981RH2636215289.42    1 AC037480
S/G/Y/R/B/O NT_010356AC037480846189271RH2865115289.94    1 AC037480
S/G/Y/R/B/O NT_010356AC037480846193581RH5407215289.42  15316.901 AC037480
S/G/Y/R/B/O NT_010356AC037480846194541RH4586715287.76    1 AC037480
S/G/Y/R/B/O NT_010356AC068969827843701          
S/G/Y/R/B/O NT_010356AC055784827900681          
S/G/Y/R/B/O NT_010356AC103982828443992RH1791315318.62    1AC067805, AC068969, AC067805, AC068969, AC103982
S/G/Y/R/B/O NT_010356AC103982828640182RH5420715318.56  15342.001AC067805, AC068969, AC067805, AC068969, AC103982, AC107954
S/G/Y/R/B/O NT_010356AC103982828667832RH2631915320.51    1AC067805, AC068969, AC067805, AC068969, AC103982, AC107954
S/G/Y/R/B/O NT_010356AC103982828668542RH3955915320.51    1AC067805, AC068969, AC067805, AC068969, AC103982, AC107954
S/G/Y/R/B/O NT_010356AC067805828883323RH7806615320.51    1AC068969, AC067805, AC068969, AC107954
S/G/Y/R/B/O NT_010356AC067805828892323RH42859  153357.00  1AC068969, AC067805, AC068969, AC107954
S/G/Y/R/B/O NT_010356AC013565829841673          
S/G/Y/R/B/O NT_010356AC005318831848233RH1808515322.04    1 AC005318
S/G/Y/R/B/O NT_010356AC005318831862593RH7507115319.13    1 AC005318
S/G/Y/R/B/O NT_010356AC005318831862803RH3954315320.51    1 AC005318
S/G/Y/R/B/O NT_010356AC005318831993603RH5413215320.51  15337.301 AC005318, L34219
S/G/Y/R/B/O NT_010356AC005318831997393RH1759015318.56    1 AC005318, L34219
S/G/Y/R/B/O NT_010356AC005317832793733RH6602515320.51    1  
S/G/Y/R/B/O NT_010356AC005317832830663WI-5479    15337.401 AC005317
S/G/Y/R/B/O NT_010356AC005317833033373AFM211XB12    15334.101 AC005316, AC005317
S/G/Y/R/B/O NT_010356AC005317833059223RH6830615318.56    1 AC005316, AC005317
S/G/Y/R/B/O NT_010356AC005317833059413RH7777015318.62    1 AC005316, AC005317
S/G/Y/R/B/O NT_010356AC005317833063133RH6784515318.56    1 AC005316, AC005317
S/G/Y/R/B/O NT_010356AC005317833075353RH9371315318.62    1 AC005316, AC005317
S/G/Y/R/B/O NT_010356AC013391834489711D15S202    15337.301 AC013391
S/G/Y/R/B/O NT_010356AC013391834489711RH4908415320.51    1 AC013391
S/G/Y/R/B/O NT_010356AC013391834489711RH595  153329.00  1 AC013391
S/G/Y/R/B/O NT_010356AC013391836627271D15S116    15337.401 AC013391
S/G/Y/R/B/O NT_010356AC013391837024681RH5406015320.51  15337.301 AC013391
S/G/Y/R/B/O NT_010356AC013391837025391RH1021415318.56    1 AC013391


  NT_010356 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010356AC092769835061751RH6738915318.56    1 AC092769
S/G/Y/R/B/O NT_010356AC092769835103611RH3959615320.51    1AC027638, AC087284, AC027638, AC087284, AC092769
S/G/Y/R/B/O NT_010356AC092769835160501RH1247  153363.00  1AC027638, AC087284, AC027638, AC087284, AC092769
S/G/Y/R/B/O NT_010356AC092769835195321RH7778915318.56    1AC027638, AC087284, AC027638, AC087284, AC092769
S/G/Y/R/B/O NT_010356AC092769835196131RH1067915320.51    1AC027638, AC087284, AC027638, AC087284, AC092769
S/G/Y/R/B/O NT_010356AC092769835197361RH994615318.56    1AC027638, AC087284, AC027638, AC087284, AC092769
S/G/Y/R/B/O NT_010356AC092769835201891RH6565115320.51    1AC027638, AC087284, AC027638, AC087284, AC092769
S/G/Y/R/B/O NT_010356AC087284835685422RH7580215318.56    1AC027638, AC027638, AC087284
S/G/Y/R/B/O NT_010356AC027638836068631          
S/G/Y/R/B/O NT_010356AC013787837397631          
S/G/Y/R/B/O NT_010356AC079075838201451RH10228415323.01    1AC013787, AC013787, AC079075
S/G/Y/R/B/O NT_010356AC079075838206001RH9914015320.51    1AC013787, AC013787, AC079075
S/G/Y/R/B/O NT_010356AC079075841069611RH9295515320.51    1AC013787, AC013787, AC079075
S/G/Y/R/B/O NT_010356AC079075841446091RH3946415322.04    1AC013787, AC013787, AC079075
S/G/Y/R/B/O NT_010356AC079075841446621RH7779315318.56    1AC013787, AC013787, AC079075
S/G/Y/R/B/O NT_010356AC079075841461561RH10281615319.19    1AC013787, AC013787, AC079075
S/G/Y/R/B/O NT_010356AC027176838218491          
S/G/Y/R/B/O NT_010356AC013281839419451RH4421115320.51    2AC015494, AC018988, AC079075, AC087478, AC013281, AC015494, AC018988, AC079075, AC087478
S/G/Y/R/B/O NT_010356AC015494839632721RH5415715320.51  15337.401AC013281, AC018988, AC087478, AC013281, AC015494, AC018988, AC087478
S/G/Y/R/B/O NT_010356AC015494839668591RH5440915320.51  15337.401AC013281, AC018988, AC087478, AC013281, AC015494, AC018988, AC087478
S/G/Y/R/B/O NT_010356AC015494842064411RH4727715318.56    1AC013281, AC018988, AC079075, AC087478, AC013281, AC015494, AC018988, AC079075, AC087478
S/G/Y/R/B/O NT_010356AC018988840241981RH5438915320.51  15337.301AC013281, AC015494, AC079075, AC087478, AC013281, AC015494, AC018988, AC079075, AC087478
S/G/Y/R/B/O NT_010356AC018988840307931RH3958915318.56    1AC013281, AC015494, AC079075, AC087478, AC013281, AC015494, AC018988, AC079075, AC087478
S/G/Y/R/B/O NT_010356AC087478840606501RH4421115320.51    2AC013281, AC015494, AC018988, AC079075, AC013281, AC015494, AC018988, AC079075, AC087478
S/G/Y/R/B/O NT_010356AC087478840607171RH5414915320.51  15337.301AC015494, AC018988, AC079075, AC015494, AC018988, AC079075, AC087478
S/G/Y/R/B/O NT_010356AC104259842106222          
S/G/Y/R/B/O NT_010356AC109513843517332RH7783015319.19    1AC013489, AC013489, AC109513
S/G/Y/R/B/O NT_010356AC109513843517542RH7527315314.99    1AC013489, AC013489, AC109513
S/G/Y/R/B/O NT_010356AC109513843519592RH5424215319.19  15335.801AC013489, AC013489, AC109513
S/G/Y/R/B/O NT_010356AC109513843671302RH9361915318.62    1AC013489, AC013489, AC109513
S/G/Y/R/B/O NT_010356AC109513843756902RH5403115319.19  15335.801AC013489, AC013489, AC109513
S/G/Y/R/B/O NT_010356AC109513843802542RH8005715314.89    1AC013489, AC013489, AC109513
S/G/Y/R/B/O NT_010356AC109513843863152RH3948615314.93    1AC013489, AC013489, AC109513
S/G/Y/R/B/O NT_010356AC109513843864622RH9354515318.62    1AC013489, AC013489, AC109513
S/G/Y/R/B/O NT_010356AC013489845064141RH4490715318.62    1AC104259, AC013489, AC104259
S/G/Y/R/B/O NT_010356AC058811846479081          
S/G/Y/R/B/O NT_010356 - RH1722415306.58    1AC007897, AC021739, AC026840, AC068402, AC007897, AC021739, AC026840, AC068402
S/G/Y/R/B/O NT_010356 - WI-18039    15323.200  
S/G/Y/R/B/O NT_010356 - WI-3598    15324.401AC016180, AC025841, AC104593, AC016180, AC025841, AC104593
S/G/Y/R/B/O NT_010356 - RH385215307.09  15324.501AC104593, AC104593
S/G/Y/R/B/O NT_010356 - RH3948815306.58    1AC007897, AC022221, AC026840, AC068402, AC087286, AC007897, AC022221, AC026840, AC068402, AC087286
S/G/Y/R/B/O NT_010356 - WI-16595    15324.701AC110592, AC110592
S/G/Y/R/B/O NT_010356 - RH4435615320.51    0AC013281, AC015494, AC087478, AC013281, AC015494, AC087478
S/G/Y/R/B/O NT_010356 - RH4437115319.19    0AC013489, AC013489
S/G/Y/R/B/O NT_010356 - RH4467815306.98    1AC007897, AC026840, AC068402, AC007897, AC026840, AC068402
S/G/Y/R/B/O NT_010356 - RH4905415311.70    1AC011629, AC011629, AC104589
S/G/Y/R/B/O NT_010356 - RH4955315316.83    1AC020687, AC020687, AC107876
S/G/Y/R/B/O NT_010356 - RH5416815306.78  15326.301AC007897, AC021739, AC068402, AC007897, AC021739, AC068402
S/G/Y/R/B/O NT_010356 - RH5418115307.09  15326.301AC007897, AC021739, AC026840, AC068402, AC007897, AC021739, AC026840, AC068402
S/G/Y/R/B/O NT_010356 - AFM168XA11    15326.401AC110592, AC110592


  NT_010356 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGM ChrGM99 GB4WI ChrWIG3 ChrSHGC G3PlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_010356 - WI-9879    15328.001AC069197, AC011050, AC069197
S/G/Y/R/B/O NT_010356 - RH5421715313.95  15330.901AC016987, AC016987
S/G/Y/R/B/O NT_010356 - RH6563315318.78    2AL390776, AC004254, AC023953, AL390776
S/G/Y/R/B/O NT_010356 - D15S151    15331.101AC011629, AC011629, AC104589
S/G/Y/R/B/O NT_010356 - RH6570115321.93    0  
S/G/Y/R/B/O NT_010356 - CHLC.ATA28G05    15332.902AC015558, AC068206, AC090257, AC015558, AC068206, AC090257
S/G/Y/R/B/O NT_010356 - RH6712115314.99    1AC011966, AC011966
S/G/Y/R/B/O NT_010356 - CHLC.GATA88C02    15334.101AC009116, AC009116
S/G/Y/R/B/O NT_010356 - RH7006715307.09    1AC007897, AC021739, AC026840, AC068402, AC007897, AC021739, AC026840, AC068402
S/G/Y/R/B/O NT_010356 - SGC30075    15334.101AC011966, AC011966
S/G/Y/R/B/O NT_010356 - RH9262615307.09    1AC007897, AC021739, AC026840, AC068402, AC007897, AC021739, AC026840, AC068402
S/G/Y/R/B/O NT_010356 - WI-5246    15335.801AC015556, AC087593, AC015556, AC087593
S/G/Y/R/B/O NT_010356 - RH9264915307.09    1AC007897, AC021739, AC022221, AC026840, AC068402, AC087286, AC007897, AC021739, AC022221, AC026840, AC068402, AC087286
S/G/Y/R/B/O NT_010356 - WI-4034    15335.801AC011966, AC011966, AC023844
S/G/Y/R/B/O NT_010356 - RH9346715320.51    0AC005318, AC005318