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  Chromosome 9 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_008413 NT_035002 NT_037733 NT_037734 NT_023974 NT_033210 NT_035004 NT_037735
NT_035005 NT_035007 NT_037736 NT_037737 NT_035008 NT_037738 NT_033214 NT_033207
NT_037739 NT_033218 NT_033213 NT_037740 NT_037741 NT_033211 NT_033219 NT_033217
NT_037742 NT_029359 NT_033208 NT_033212 NT_035011 NT_031832 NT_033205 NT_035010
NT_030753 NT_037743 NT_033209 NT_008580 NT_023935 NT_023932 NT_008476 NT_008470
NT_037744 NT_017568 NT_008338 NT_035014 NT_037745 NT_008554 NT_030058 NT_019501
NT_024000 NT_035015 NT_037746 NT_023929


  NT_008580
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_008580AL353608626920213chr9NT_008580AL1614576286501230199501995
S/G/Y/R/B/O NT_008580AL353608626920213  AL7735285028314210687600106876
S/G/Y/R/B/O NT_008580AL353608626920213  AL7735285028314210687600106876
S/G/Y/R/B/O NT_008580AL161457628650123chr9NT_008580AL3536166298740030199701997
S/G/Y/R/B/O NT_008580AL161457628650123  AC0250211112584010083122667
S/G/Y/R/B/O NT_008580AL161457628650123  AL77352862987400356420035642
S/G/Y/R/B/O NT_008580AL161457628650123  AL77352862987400356420035642
S/G/Y/R/B/O NT_008580AL353616629874003chr9NT_008580AL3547946315539330000
S/G/Y/R/B/O NT_008580AL353616629874003  AC02502162987400243500024350
S/G/Y/R/B/O NT_008580AL354794631553933chr9NT_008580AL35621963309364300100100
S/G/Y/R/B/O NT_008580AL356219633093643chr9NT_008580AL1627306342473330000
S/G/Y/R/B/O NT_008580AL162730634247333chr9NT_008580AL5902386359411432000002000
S/G/Y/R/B/O NT_008580AL590238635941143chr9NT_008580AL3581136363775130199801998
S/G/Y/R/B/O NT_008580AL358113636377513chr9NT_008580AL3551406376546930190601906
S/G/Y/R/B/O NT_008580AL355140637654693chr9NT_008580AL3536936394856530199401994
S/G/Y/R/B/O NT_008580AL353693639485653chr9NT_008580AL1624216401026632000002000
S/G/Y/R/B/O NT_008580AL162421640102663chr9NT_008580AL1624126411629832000002000
S/G/Y/R/B/O NT_008580AL162421640102663  AC008248637654693845801737355831
S/G/Y/R/B/O NT_008580AL162412641162983chr9NT_008580AL6036256430357532000002000
S/G/Y/R/B/O NT_008580AL162412641162983  AC00824863948565772512461079712
S/G/Y/R/B/O NT_008580AL603625643035753chr9NT_008580AL5912156431496732000002000
S/G/Y/R/B/O NT_008580AL591215643149673chr9NT_008580AL6066666446755932000002000
S/G/Y/R/B/O NT_008580AL591215643149673  AC022857643149674513489204191795971
S/G/Y/R/B/O NT_008580AL591215643149673  AF16513964314967249300024930
S/G/Y/R/B/O NT_008580AL606666644675593chr9NT_008580AL3920446449558030018601860
S/G/Y/R/B/O NT_008580AL606666644675593  AF16513964467559279870217030157
S/G/Y/R/B/O NT_008580AL392044644955803chr9NT_008580AL1581536466078630000
S/G/Y/R/B/O NT_008580AL392044644955803  AF1651396431496710248800102488
S/G/Y/R/B/O NT_008580AL158153646607863chr9NT_008580AL1623906470579730000
S/G/Y/R/B/O NT_008580AL162390647057973chr9NT_008580AL4426456488812432000002000
S/G/Y/R/B/O NT_008580AL162390647057973  AL35613964467559324792723035202
S/G/Y/R/B/O NT_008580AL442645648881243chr9NT_008580AL3587866503680832000002000
S/G/Y/R/B/O NT_008580AL442645648881243  AL3561396470579788758199445171135923
S/G/Y/R/B/O NT_008580AL358786650368083chr9NT_008580AL15999065155615300100100
S/G/Y/R/B/O NT_008580AL159990651556153chr9NT_008580AL3563186530434830000
S/G/Y/R/B/O NT_008580AL356318653043483chr9NT_008580AL5924386544558730196301963
S/G/Y/R/B/O NT_008580AL592438654455873chr9NT_008580AL1619136548610032000002000
S/G/Y/R/B/O NT_008580AL592438654455873  AL59221365304348386780038678
S/G/Y/R/B/O NT_008580AL161913654861003chr9NT_008580AL1602736562199732000002000
S/G/Y/R/B/O NT_008580AL161913654861003  AL5922136562199711857000118570
S/G/Y/R/B/O NT_008580AL160273656219973chr9NT_008580AL39181965779931300100100
S/G/Y/R/B/O NT_008580AL391819657799313chr9NT_008580AL3921066594163330000
S/G/Y/R/B/O NT_008580AL391819657799313  AL36000365621997192710019271
S/G/Y/R/B/O NT_008580AL392106659416333chr9NT_008580AL16173266092304300100100
S/G/Y/R/B/O NT_008580AL161732660923043chr9NT_008580AL6713096622959532000002000
S/G/Y/R/B/O NT_008580AL161732660923043  AC024723660923045238737214232298430
S/G/Y/R/B/O NT_008580AL671309662295953chr9NT_008580AL1387516634557132000002000
S/G/Y/R/B/O NT_008580AL671309662295953  AC024723662295951339001824131631
S/G/Y/R/B/O NT_008580AL671309662295953  AC0731246622959582520206420907105491
S/G/Y/R/B/O NT_008580AL138751663455713chr9NT_008580AL5838296653941530200002000
S/G/Y/R/B/O NT_008580AL138751663455713  AC073124660923041067202142632098
S/G/Y/R/B/O NT_008580AL583829665394153chr9NT_008580AL5903116658698832000002000
S/G/Y/R/B/O NT_008580AL590311665869883chr9NT_008580AL1359246671692132000002000
S/G/Y/R/B/O NT_008580AL135924667169213chr9NT_008580AL4456466687790630000
S/G/Y/R/B/O NT_008580AL445646668779063chr9NT_008580AL5964486694192632000002000
S/G/Y/R/B/O NT_008580AL596448669419263chr9NT_008580AL4493236695040032000002000
S/G/Y/R/B/O NT_008580AL449323669504003chr9NT_008580AL5916626706777830200002000
S/G/Y/R/B/O NT_008580AL591662670677783chr9NT_008580AL5906626723659332000002000
S/G/Y/R/B/O NT_008580AL591662670677783  AL359635669419264175610871148554328
S/G/Y/R/B/O NT_008580AL590662672365933chr9NT_008580AL1624166726876430000
S/G/Y/R/B/O NT_008580AL590662672365933  AL3596356723659314329757015086
S/G/Y/R/B/O NT_008580AL162416672687643chr9NT_008580AL5910316734237330199801998
S/G/Y/R/B/O NT_008580AL591031673423733chr9NT_008580AL3599976747727030015951595
S/G/Y/R/B/O NT_008580AL359997674772703chr9NT_008580AL4490836764437330016761676
S/G/Y/R/B/O NT_008580AL449083676443733chr9NT_008580AL3556046777131830000
S/G/Y/R/B/O NT_008580AL355604677713183chr9NT_008580AL4511276795232830000
S/G/Y/R/B/O NT_008580AL451127679523283chr9NT_008580AL5125946806118630018891889
S/G/Y/R/B/O NT_008580AL451127679523283  AC05347167477270759617071578892456
S/G/Y/R/B/O NT_008580AL451127679523283  AL39155867477270215940021594
S/G/Y/R/B/O NT_008580AL451127679523283  AL59071268061186694150069415
S/G/Y/R/B/O NT_008580AL512594680611863chr9NT_008580AL6273246822537830199401994
S/G/Y/R/B/O NT_008580AL512594680611863  AC0242876806118610476934184159112346
S/G/Y/R/B/O NT_008580AL512594680611863  AC05347168061186417240364045364
S/G/Y/R/B/O NT_008580AL512594680611863  AL39155868061186343470111665146012
S/G/Y/R/B/O NT_008580AL627324682253783chr9NT_008580AL5131246825306530015321532
S/G/Y/R/B/O NT_008580AL627324682253783  AC02117768225378248490024849
S/G/Y/R/B/O NT_008580AL513124682530653chr9NT_008580AL5126446842383130000
S/G/Y/R/B/O NT_008580AL513124682530653  AC021177682530656714902814695295
S/G/Y/R/B/O NT_008580AL512644684238313chr9NT_008580AL6036526856575030195501955
S/G/Y/R/B/O NT_008580AL603652685657503chr9NT_008580AL3578726862125732000002000
S/G/Y/R/B/O NT_008580AL357872686212573chr9NT_008580AL3551526871242930000
S/G/Y/R/B/O NT_008580AL357872686212573  AC01928768423831324840693439418
S/G/Y/R/B/O NT_008580AL355152687124293chr9NT_008580AL3556746882858030000
S/G/Y/R/B/O NT_008580AL355152687124293  AC019287685657501976101239132152
S/G/Y/R/B/O NT_008580AL355674688285803chr9NT_008580AL13701869003354300100100
S/G/Y/R/B/O NT_008580AL137018690033543chr9NT_008580AL15883369160422300100100
S/G/Y/R/B/O NT_008580AL158833691604223chr9NT_008580AL35479569169192300100100
S/G/Y/R/B/O NT_008580AL354795691691923chr9NT_008580AL3908746936438230000
S/G/Y/R/B/O NT_008580AL390874693643823chr9NT_008580AL15882569373087300100100
S/G/Y/R/B/O NT_008580AL158825693730873chr9NT_008580AL13354869500386300100100
S/G/Y/R/B/O NT_008580AL133548695003863chr9NT_008580AL3537566965367830017651765
S/G/Y/R/B/O NT_008580AL353756696536783chr9NT_008580AL1580736979783330000
S/G/Y/R/B/O NT_008580AL158073697978333chr9NT_008580AL3537806998216630015251525
S/G/Y/R/B/O NT_008580AL158073697978333  AC010828695003866978901223582024
S/G/Y/R/B/O NT_008580AL353780699821663chr9NT_008580AL1602807006840432000002000
S/G/Y/R/B/O NT_008580AL353780699821663  AC010828699821662555701329738854
S/G/Y/R/B/O NT_008580AL160280700684043chr9NT_008580AL1578837017543530000
S/G/Y/R/B/O NT_008580AL157883701754353chr9NT_008580AL3592537035031330199801998
S/G/Y/R/B/O NT_008580AL359253703503133chr9NT_008580AL3536077053792130000
S/G/Y/R/B/O NT_008580AL359253703503133  AL35765370175435427380853751275
S/G/Y/R/B/O NT_008580AL353607705379213chr9NT_008580AL5896537067709132000002000
S/G/Y/R/B/O NT_008580AL353607705379213  AL35765370175435579960057996
S/G/Y/R/B/O NT_008580AL589653706770913chr9NT_008580AL3918687078039030199501995
S/G/Y/R/B/O NT_008580AL391868707803903chr9NT_008580AL5906647088052730000
S/G/Y/R/B/O NT_008580AL590664708805273chr9NT_008580AL1616267094674430199901999
S/G/Y/R/B/O NT_008580AL590664708805273  AL13875770677091543590054359
S/G/Y/R/B/O NT_008580AL161626709467443chr9NT_008580AL35931471128602300100100
S/G/Y/R/B/O NT_008580AL161626709467443  AC00955670946744464100046410
S/G/Y/R/B/O NT_008580AL161626709467443  AL13875770946744849070936494271
S/G/Y/R/B/O NT_008580AL161626709467443  AL16162570946744289190028919
S/G/Y/R/B/O NT_008580AL359314711286023chr9NT_008580AL39023971256982300100100
S/G/Y/R/B/O NT_008580AL359314711286023  AC00955670880527777680602483792
S/G/Y/R/B/O NT_008580AL359314711286023  AL1616257088052785188227425814113276
S/G/Y/R/B/O NT_008580AL390239712569823chr9NT_008580AL3536377138599132000002000
S/G/Y/R/B/O NT_008580AL353637713859913chr9NT_008580AL1617897153045730194001940
S/G/Y/R/B/O NT_008580AL161789715304573chr9NT_008580AL3537107159542632000002000
S/G/Y/R/B/O NT_008580AL353710715954263chr9NT_008580AL3592047170405930000
S/G/Y/R/B/O NT_008580AL359204717040593chr9NT_008580AL15815971803650300100100
S/G/Y/R/B/O NT_008580AL158159718036503chr9NT_008580AL3537947197055630199901999
S/G/Y/R/B/O NT_008580AL353794719705563chr9NT_008580AL3598497203891232000002000
S/G/Y/R/B/O NT_008580AL353794719705563  AC01601171704059220550271124766
S/G/Y/R/B/O NT_008580AL359849720389123chr9NT_008580AL3555357205912330000
S/G/Y/R/B/O NT_008580AL359849720389123  AC01601172038912154040015404
S/G/Y/R/B/O NT_008580AL355535720591233chr9NT_008580AL16026872243781300100100
S/G/Y/R/B/O NT_008580AL355535720591233  AC0121967197055647350246414349957
S/G/Y/R/B/O NT_008580AL355535720591233  AC01601171970556132533079016332
S/G/Y/R/B/O NT_008580AL160268722437813chr9NT_008580AL1602787233550330000
S/G/Y/R/B/O NT_008580AL160268722437813  AC01219672243781321410032141
S/G/Y/R/B/O NT_008580AL160278723355033         
S/G/Y/R/B/O NT_008580AL160278723355033  AL1614567205912385412235884698113698