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Line color code:
- White: overlap with immediately succeeding clone
- Green: overlap with clone in same contig
- Pink: overlap with clone in same chromosome, different contig
- Red: overlap with clone on different chromosome
- Yellow: overlap with clone not used in assembly
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Links | Contig1 | Acc1 | Start1 | Phs | Chr2 | Contig2 | Acc2 | Start2 | Phs | Strong Overlap | Medium Overlap | Weak Overlap | Total Overlap |
S/G/Y/R/B/O |
NT_035014 | AL691506 | 126390104 | 1 | chr9 | NT_035014 | AL513102 | 126408113 | 3 | 142852 | 2129 | 0 | 144981 |
S/G/Y/R/B/O |
NT_035014 | AL691506 | 126390104 | 1 | chr9 | NT_035014 | AL353631 | 126551046 | 3 | 25072 | 0 | 0 | 25072 |
S/G/Y/R/B/O |
NT_035014 | AL691506 | 126390104 | 1 | chr9 | NT_035014 | AL353631 | 126551046 | 3 | 25072 | 0 | 0 | 25072 |
S/G/Y/R/B/O |
NT_035014 | AL513102 | 126408113 | 3 | chr9 | NT_035014 | AL353631 | 126551046 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_035014 | AL353631 | 126551046 | 3 | chr9 | NT_035014 | AL159997 | 126646158 | 3 | 2000 | 0 | 0 | 2000 |
S/G/Y/R/B/O |
NT_035014 | AL353631 | 126551046 | 3 | chr9 | NT_035014 | AL691506 | 126390104 | 1 | 25072 | 0 | 0 | 25072 |
S/G/Y/R/B/O |
NT_035014 | AL353631 | 126551046 | 3 | chr9 | NT_035014 | AL691506 | 126390104 | 1 | 25072 | 0 | 0 | 25072 |
S/G/Y/R/B/O |
NT_035014 | AL159997 | 126646158 | 3 | chr9 | NT_035014 | AL353701 | 126751233 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_035014 | AL353701 | 126751233 | 3 | chr9 | NT_035014 | AL354735 | 126859100 | 3 | 0 | 0 | 100 | 100 |
S/G/Y/R/B/O |
NT_035014 | AL354735 | 126859100 | 3 | chr9 | NT_035014 | AL160165 | 127048821 | 3 | 0 | 0 | 100 | 100 |
S/G/Y/R/B/O |
NT_035014 | AL160165 | 127048821 | 3 | chr9 | NT_035014 | AL445645 | 127188497 | 3 | 0 | 0 | 100 | 100 |
S/G/Y/R/B/O |
NT_035014 | AL160165 | 127048821 | 3 |   |   | AC002095 | 126751233 | | 32760 | 0 | 0 | 32760 |
S/G/Y/R/B/O |
NT_035014 | AL160165 | 127048821 | 3 |   |   | AC015488 | 126751233 | | 96965 | 5000 | 3238 | 105203 |
S/G/Y/R/B/O |
NT_035014 | AL160165 | 127048821 | 3 |   |   | AL161726 | 126751233 | | 13452 | 0 | 15152 | 28604 |
S/G/Y/R/B/O |
NT_035014 | AL445645 | 127188497 | 3 | chr9 | NT_035014 | AL593851 | 127387510 | 3 | 0 | 0 | 0 | 0 |
S/G/Y/R/B/O |
NT_035014 | AL445645 | 127188497 | 3 |   |   | AC000392 | 127188497 | | 44088 | 0 | 0 | 44088 |
S/G/Y/R/B/O |
NT_035014 | AL445645 | 127188497 | 3 |   |   | AC002095 | 127188497 | | 12628 | 0 | 0 | 12628 |
S/G/Y/R/B/O |
NT_035014 | AL445645 | 127188497 | 3 |   |   | AC002096 | 127188497 | | 39775 | 0 | 0 | 39775 |
S/G/Y/R/B/O |
NT_035014 | AL445645 | 127188497 | 3 |   |   | AC004589 | 127188497 | | 35435 | 0 | 0 | 35435 |
S/G/Y/R/B/O |
NT_035014 | AL445645 | 127188497 | 3 |   |   | AL161726 | 127048821 | | 71549 | 0 | 0 | 71549 |
S/G/Y/R/B/O |
NT_035014 | AL593851 | 127387510 | 3 | chr9 | NT_035014 | AL162417 | 127455436 | 3 | 0 | 1993 | 0 | 1993 |
S/G/Y/R/B/O |
NT_035014 | AL593851 | 127387510 | 3 |   |   | AC002120 | 127048821 | | 23435 | 0 | 0 | 23435 |
S/G/Y/R/B/O |
NT_035014 | AL162417 | 127455436 | 3 | chr9 | NT_035014 | AL732364 | 127606300 | 3 | 0 | 1953 | 0 | 1953 |
S/G/Y/R/B/O |
NT_035014 | AL162417 | 127455436 | 3 |   |   | AC000394 | 127455436 | | 40934 | 0 | 0 | 40934 |
S/G/Y/R/B/O |
NT_035014 | AL162417 | 127455436 | 3 |   |   | AC000395 | 127455436 | | 42802 | 0 | 0 | 42802 |
S/G/Y/R/B/O |
NT_035014 | AL162417 | 127455436 | 3 |   |   | AC001643 | 127455436 | | 40133 | 0 | 0 | 40133 |
S/G/Y/R/B/O |
NT_035014 | AL162417 | 127455436 | 3 |   |   | AC002097 | 127455436 | | 20541 | 0 | 0 | 20541 |
S/G/Y/R/B/O |
NT_035014 | AL162417 | 127455436 | 3 |   |   | AC002319 | 127455436 | | 35102 | 0 | 0 | 35102 |
S/G/Y/R/B/O |
NT_035014 | AL162417 | 127455436 | 3 |   |   | AL772161 | 127606300 | | 52136 | 0 | 0 | 52136 |
S/G/Y/R/B/O |
NT_035014 | AL732364 | 127606300 | 3 | chr9 | NT_035014 | AL158826 | 127692203 | 3 | 0 | 0 | 1985 | 1985 |
S/G/Y/R/B/O |
NT_035014 | AL732364 | 127606300 | 3 |   |   | AC002098 | 127606300 | | 36549 | 0 | 0 | 36549 |
S/G/Y/R/B/O |
NT_035014 | AL732364 | 127606300 | 3 |   |   | AL772161 | 127455436 | | 115437 | 0 | 0 | 115437 |
S/G/Y/R/B/O |
NT_035014 | AL158826 | 127692203 | 3 | chr9 | NT_035014 | AL593848 | 127874699 | 3 | 0 | 1999 | 0 | 1999 |
S/G/Y/R/B/O |
NT_035014 | AL158826 | 127692203 | 3 |   |   | AC002099 | 127455436 | | 46687 | 0 | 13332 | 60019 |
S/G/Y/R/B/O |
NT_035014 | AL158826 | 127692203 | 3 |   |   | AC002099 | 127455436 | | 46687 | 0 | 13332 | 60019 |
S/G/Y/R/B/O |
NT_035014 | AL158826 | 127692203 | 3 |   |   | AC002107 | 127455436 | | 39142 | 0 | 0 | 39142 |
S/G/Y/R/B/O |
NT_035014 | AL158826 | 127692203 | 3 |   |   | AC002325 | 127455436 | | 19573 | 0 | 0 | 19573 |
S/G/Y/R/B/O |
NT_035014 | AL158826 | 127692203 | 3 |   |   | AL772161 | 127606300 | | 84091 | 0 | 7832 | 91923 |
S/G/Y/R/B/O |
NT_035014 | AL593848 | 127874699 | 3 |   |   |   |   |   |   |   |   |   |
S/G/Y/R/B/O |
NT_035014 | AL593848 | 127874699 | 3 |   |   | AC001644 | 127606300 | | 42333 | 0 | 0 | 42333 |
S/G/Y/R/B/O |
NT_035014 | AL593848 | 127874699 | 3 |   |   | AC002325 | 127606300 | | 27093 | 0 | 0 | 27093 |
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