Home    Genome Browser    BLAT Search    Help
  Chromosome 9 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_008413 NT_035002 NT_037733 NT_037734 NT_023974 NT_033210 NT_035004 NT_037735
NT_035005 NT_035007 NT_037736 NT_037737 NT_035008 NT_037738 NT_033214 NT_033207
NT_037739 NT_033218 NT_033213 NT_037740 NT_037741 NT_033211 NT_033219 NT_033217
NT_037742 NT_029359 NT_033208 NT_033212 NT_035011 NT_031832 NT_033205 NT_035010
NT_030753 NT_037743 NT_033209 NT_008580 NT_023935 NT_023932 NT_008476 NT_008470
NT_037744 NT_017568 NT_008338 NT_035014 NT_037745 NT_008554 NT_030058 NT_019501
NT_024000 NT_035015 NT_037746 NT_023929


  NT_023974
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_023974AL355433272155073chr9NT_023974AL1334112739272730000
S/G/Y/R/B/O NT_023974AL355433272155073  AL35543226912972898970089897
S/G/Y/R/B/O NT_023974AL133411273927273chr9NT_023974AL1631922749217230000
S/G/Y/R/B/O NT_023974AL163192274921723chr9NT_023974AL4511232763091332000002000
S/G/Y/R/B/O NT_023974AL451123276309133chr9NT_023974AL3555852776974030199801998
S/G/Y/R/B/O NT_023974AL451123276309133  AC025611276309135222843413989596464
S/G/Y/R/B/O NT_023974AL451123276309133  AL139116276309139757628500100426
S/G/Y/R/B/O NT_023974AL355585277697403chr9NT_023974AL1623962784406132000002000
S/G/Y/R/B/O NT_023974AL355585277697403  AC02561127769740221070167323780
S/G/Y/R/B/O NT_023974AL162396278440613chr9NT_023974AL3600142795993330000
S/G/Y/R/B/O NT_023974AL360014279599333chr9NT_023974AL3537462804578730199601996
S/G/Y/R/B/O NT_023974AL353746280457873chr9NT_023974AL4511242822163930199801998
S/G/Y/R/B/O NT_023974AL353746280457873  AL39025027959933196620019662
S/G/Y/R/B/O NT_023974AL451124282216393chr9NT_023974AL5963232838393032000002000
S/G/Y/R/B/O NT_023974AL451124282216393  AL39025028045787250060025006
S/G/Y/R/B/O NT_023974AL596323283839303chr9NT_023974AL3536832847342530199601996
S/G/Y/R/B/O NT_023974AL353683284734253chr9NT_023974AL44552628669888300100100
S/G/Y/R/B/O NT_023974AL445526286698883chr9NT_023974AL5922062879681730200002000
S/G/Y/R/B/O NT_023974AL445526286698883  AC01257628383930234980023498
S/G/Y/R/B/O NT_023974AL592206287968173chr9NT_023974AL4504282885231432000002000
S/G/Y/R/B/O NT_023974AL592206287968173  AC01257628796817505430691157454
S/G/Y/R/B/O NT_023974AL450428288523143chr9NT_023974AL1580722893512230000
S/G/Y/R/B/O NT_023974AL450428288523143  AC012576288523141778428235967280279
S/G/Y/R/B/O NT_023974AL450428288523143  AC02537728852314766610272679387
S/G/Y/R/B/O NT_023974AL158072289351223chr9NT_023974AL35475829135862300100100
S/G/Y/R/B/O NT_023974AL158072289351223  AC0117842879681796180138227539117541
S/G/Y/R/B/O NT_023974AL158072289351223  AC025377287968175809730952205083242
S/G/Y/R/B/O NT_023974AL354758291358623chr9NT_023974AL36018029228387300100100
S/G/Y/R/B/O NT_023974AL354758291358623  AC01178429135862168170635323170
S/G/Y/R/B/O NT_023974AL360180292283873chr9NT_023974AL16238829305520300100100
S/G/Y/R/B/O NT_023974AL162388293055203chr9NT_023974AL35368429479301300100100
S/G/Y/R/B/O NT_023974AL353684294793013chr9NT_023974AL13889329589663300100100
S/G/Y/R/B/O NT_023974AL138893295896633chr9NT_023974AL35467629746602300100100
S/G/Y/R/B/O NT_023974AL138893295896633  AC02290129305520549333069058002
S/G/Y/R/B/O NT_023974AL354676297466023chr9NT_023974AL5131322981854230014241424
S/G/Y/R/B/O NT_023974AL354676297466023  AC022901297466023056398751335953797
S/G/Y/R/B/O NT_023974AL513132298185423chr9NT_023974AL5906722999724130018771877
S/G/Y/R/B/O NT_023974AL590672299972413chr9NT_023974AL4510453005577330199401994
S/G/Y/R/B/O NT_023974AL590672299972413  AL35558429997241598210059821
S/G/Y/R/B/O NT_023974AL451045300557733chr9NT_023974AL3921103014084530000
S/G/Y/R/B/O NT_023974AL392110301408453chr9NT_023974AL3908833030676530000
S/G/Y/R/B/O NT_023974AL392110301408453  AC00039029997241376150037615
S/G/Y/R/B/O NT_023974AL390883303067653chr9NT_023974AL1599953038111830199101991
S/G/Y/R/B/O NT_023974AL390883303067653  AC04103629997241650613567068628
S/G/Y/R/B/O NT_023974AL159995303811183chr9NT_023974AL3538083054416830200002000
S/G/Y/R/B/O NT_023974AL159995303811183  AC02693230381118187693467522127457
S/G/Y/R/B/O NT_023974AL159995303811183  AC041036303811181533302951544848
S/G/Y/R/B/O NT_023974AL353808305441683chr9NT_023974AL3547043058643032000002000
S/G/Y/R/B/O NT_023974AL353808305441683  AC02693230306765150240015024
S/G/Y/R/B/O NT_023974AL354704305864303chr9NT_023974AL3908443071514830000
S/G/Y/R/B/O NT_023974AL354704305864303  AC02693230586430470490047049
S/G/Y/R/B/O NT_023974AL390844307151483chr9NT_023974AL5907263087872530200002000
S/G/Y/R/B/O NT_023974AL390844307151483  AC06480930544168465456757053302
S/G/Y/R/B/O NT_023974AL390844307151483  AL359032305441683432602152455850
S/G/Y/R/B/O NT_023974AL590726308787253chr9NT_023974AL3537353098961130197701977
S/G/Y/R/B/O NT_023974AL590726308787253  AC06480930878725761370076137
S/G/Y/R/B/O NT_023974AL590726308787253  AL359032309896112213723902561950146
S/G/Y/R/B/O NT_023974AL353735309896113chr9NT_023974AL3537453103548132000002000
S/G/Y/R/B/O NT_023974AL353745310354813chr9NT_023974AL3555823120833130199801998
S/G/Y/R/B/O NT_023974AL355582312083313chr9NT_023974AL3548543132217930019171917
S/G/Y/R/B/O NT_023974AL354854313221793chr9NT_023974AL35378331489729300100100
S/G/Y/R/B/O NT_023974AL354854313221793  AC02277231322179109540010954
S/G/Y/R/B/O NT_023974AL353783314897293chr9NT_023974AL1627283162631732000002000
S/G/Y/R/B/O NT_023974AL353783314897293chr5NT_037662AC0220921353128983628780062878
S/G/Y/R/B/O NT_023974AL353783314897293  AC02277213531289852669134862987796032
S/G/Y/R/B/O NT_023974AL162728316263173chr9NT_023974AL5906763163150130199401994
S/G/Y/R/B/O NT_023974AL590676316315013chr9NT_023974AL7318153177861530199901999
S/G/Y/R/B/O NT_023974AL731815317786153chr9NT_023974AL3537283178060932000002000
S/G/Y/R/B/O NT_023974AL353728317806093chr9NT_023974AL1604073194434830000
S/G/Y/R/B/O NT_023974AL160407319443483chr9NT_023974AL1614443197195430000
S/G/Y/R/B/O NT_023974AL161444319719543chr9NT_023974AL4511383212051730000
S/G/Y/R/B/O NT_023974AL451138321205173chr9NT_023974AL5898253223579030198801988
S/G/Y/R/B/O NT_023974AL451138321205173  AC02283031778615604704238064708
S/G/Y/R/B/O NT_023974AL589825322357903chr9NT_023974AL5131673229136830199301993
S/G/Y/R/B/O NT_023974AL589825322357903  AC02283032235790244444229028673
S/G/Y/R/B/O NT_023974AL513167322913683chr9NT_023974AL3535733235913830000
S/G/Y/R/B/O NT_023974AL353573323591383chr9NT_023974AL1617833252380230000
S/G/Y/R/B/O NT_023974AL161783325238023chr9NT_023974AL3536713263349432000002000
S/G/Y/R/B/O NT_023974AL353671326334943chr9NT_023974AL5896423278707932000002000
S/G/Y/R/B/O NT_023974AL353671326334943  AL35581132523802286024462171934783
S/G/Y/R/B/O NT_023974AL589642327870793chr9NT_023974AL1578843287806132000002000
S/G/Y/R/B/O NT_023974AL589642327870793  AL161623328780611307001512628196
S/G/Y/R/B/O NT_023974AL589642327870793  AL35581132633494104910010491
S/G/Y/R/B/O NT_023974AL157884328780613chr9NT_023974AL3537173305299332000002000
S/G/Y/R/B/O NT_023974AL157884328780613  AC0155533263349411622700116227
S/G/Y/R/B/O NT_023974AL157884328780613  AL161623326334943800022041343153635
S/G/Y/R/B/O NT_023974AL353717330529933chr9NT_023974AL1625903317152630199901999
S/G/Y/R/B/O NT_023974AL353717330529933  AC01555332787079473540047354
S/G/Y/R/B/O NT_023974AL162590331715263chr9NT_023974AL1614453326779530000
S/G/Y/R/B/O NT_023974AL161445332677953chr9NT_023974AL3564723342919630199501995
S/G/Y/R/B/O NT_023974AL161445332677953  AC027812330529935350323471949075340
S/G/Y/R/B/O NT_023974AL161445332677953  AC03414433052993773190077319
S/G/Y/R/B/O NT_023974AL356472334291963chr9NT_023974AL3562183352578930000
S/G/Y/R/B/O NT_023974AL356472334291963  AC027812334291964590345581758468045
S/G/Y/R/B/O NT_023974AL356472334291963  AC034144334291965648504113197616
S/G/Y/R/B/O NT_023974AL356218335257893chr9NT_023974AL1390083366662830199701997
S/G/Y/R/B/O NT_023974AL356218335257893  AC03414433267795108330010833
S/G/Y/R/B/O NT_023974AL356218335257893  AL353675336666286953401624685780
S/G/Y/R/B/O NT_023974AL139008336666283chr9NT_023974AL3564893382460230000
S/G/Y/R/B/O NT_023974AL139008336666283  AL35367533666628307500030750
S/G/Y/R/B/O NT_023974AL356489338246023chr9NT_023974AL3585733395514132000002000
S/G/Y/R/B/O NT_023974AL358573339551413chr9NT_023974AL1391133396813930199601996
S/G/Y/R/B/O NT_023974AL139113339681393chr9NT_023974AL3549893415941930199901999
S/G/Y/R/B/O NT_023974AL139113339681393  AL3537491406205012428348181339042491
S/G/Y/R/B/O NT_023974AL354989341594193chr9NT_023974AL1600513430940930100001000
S/G/Y/R/B/O NT_023974AL354989341594193  AL353749343094093923561821422459641
S/G/Y/R/B/O NT_023974AL354989341594193  AP00108334309409189533763123423950
S/G/Y/R/B/O NT_023974AL160051343094093chr9NT_023974AL3536623433904130199501995
S/G/Y/R/B/O NT_023974AL353662343390413chr9NT_023974AL3564943450503930200002000
S/G/Y/R/B/O NT_023974AL356494345050393chr9NT_023974AL1602703458678930196301963
S/G/Y/R/B/O NT_023974AL356494345050393  AL35908834339041399740039974
S/G/Y/R/B/O NT_023974AL160270345867893chr9NT_023974AL4502833478390332000002000
S/G/Y/R/B/O NT_023974AL160270345867893  AL3590883450503917676000176760
S/G/Y/R/B/O NT_023974AL450283347839033chr9NT_023974AL1622313481591130199301993
S/G/Y/R/B/O NT_023974AL162231348159113chr9NT_023974AL5896453500034430199001990
S/G/Y/R/B/O NT_023974AL589645350003443chr9NT_023974AL3553773504666730000
S/G/Y/R/B/O NT_023974AL355377350466673chr9NT_023974AL3537953520172430194101941
S/G/Y/R/B/O NT_023974AL353795352017243chr9NT_023974AL3546693539482630000
S/G/Y/R/B/O NT_023974AL353795352017243  AC00447235201724764600076460
S/G/Y/R/B/O NT_023974AL353795352017243  AL391668350466673669026871989059267
S/G/Y/R/B/O NT_023974AL354669353948263chr9NT_023974AL1602743546551930199901999
S/G/Y/R/B/O NT_023974AL160274354655193chr9NT_023974AL5921453560762132000002000
S/G/Y/R/B/O NT_023974AL592145356076213chr9NT_023974AL1334763561150632000002000
S/G/Y/R/B/O NT_023974AL133476356115063chr9NT_023974AL3578743576333230012641264
S/G/Y/R/B/O NT_023974AL133476356115063  AC010948354655199295565312357101843
S/G/Y/R/B/O NT_023974AL357874357633323chr9NT_023974AL13341035849660300100100
S/G/Y/R/B/O NT_023974AL133410358496603chr9NT_023974AL1358413604493830000
S/G/Y/R/B/O NT_023974AL135841360449383chr9NT_023974AL1388343614472430000
S/G/Y/R/B/O NT_023974AL138834361447243chr9NT_023974AL15883036268037300100100
S/G/Y/R/B/O NT_023974AL158830362680373chr9NT_023974AL1617923645937330000
S/G/Y/R/B/O NT_023974AL161792364593733chr9NT_023974AL35493536536300300100100
S/G/Y/R/B/O NT_023974AL354935365363003chr9NT_023974AL35493236658026300100100
S/G/Y/R/B/O NT_023974AL354932366580263chr9NT_023974AL4420633681391530199701997
S/G/Y/R/B/O NT_023974AL442063368139153chr9NT_023974AL4502673695374830199601996
S/G/Y/R/B/O NT_023974AL442063368139153  AL1581483681391511227300112273
S/G/Y/R/B/O NT_023974AL450267369537483chr9NT_023974AL1617813707685832000002000
S/G/Y/R/B/O NT_023974AL450267369537483  AL15814836953748548770054877
S/G/Y/R/B/O NT_023974AL450267369537483  AP0023883681391510522000105220
S/G/Y/R/B/O NT_023974AL161781370768583chr9NT_023974AL6039123723395430199501995
S/G/Y/R/B/O NT_023974AL161781370768583  AP002388372339541869481351869245521
S/G/Y/R/B/O NT_023974AL603912372339543chr9NT_023974AL5126043724741430200002000
S/G/Y/R/B/O NT_023974AL512604372474143chr9NT_023974AL3581183742191732000002000
S/G/Y/R/B/O NT_023974AL512604372474143  AC024283372474141280724791098926275
S/G/Y/R/B/O NT_023974AL358118374219173chr9NT_023974AL1581553744508230194101941
S/G/Y/R/B/O NT_023974AL358118374219173  AC02428337233954146591147722423030
S/G/Y/R/B/O NT_023974AL158155374450823chr9NT_023974AL1581563763541830199901999
S/G/Y/R/B/O NT_023974AL158155374450823  AC0242833724741476259314229218108619
S/G/Y/R/B/O NT_023974AL158156376354183chr9NT_023974AL5131653767577132000002000
S/G/Y/R/B/O NT_023974AL513165376757713chr9NT_023974AL5914703786874730200002000
S/G/Y/R/B/O NT_023974AL513165376757713  AL13941437675771786392560081199
S/G/Y/R/B/O NT_023974AL591470378687473chr9NT_023974AL1387523792735732000002000
S/G/Y/R/B/O NT_023974AL138752379273573chr9NT_023974AL5838493811462830199901999
S/G/Y/R/B/O NT_023974AL138752379273573  AC073598376757712016203762957791
S/G/Y/R/B/O NT_023974AL138752379273573  AL13941437675771204350020435
S/G/Y/R/B/O NT_023974AL583849381146283chr9NT_023974AL1614483816080130199301993
S/G/Y/R/B/O NT_023974AL583849381146283  AC07359837868747159760015976
S/G/Y/R/B/O NT_023974AL161448381608013chr9NT_023974AL4459863832365832000002000
S/G/Y/R/B/O NT_023974AL445986383236583chr9NT_023974AL1357853844253130000
S/G/Y/R/B/O NT_023974AL445986383236583  AC0157653811462893333184411075106252
S/G/Y/R/B/O NT_023974AL135785384425313chr9NT_023974AL39079438606738300100100
S/G/Y/R/B/O NT_023974AL135785384425313  AC01576538160801214950110122596
S/G/Y/R/B/O NT_023974AL390794386067383chr9NT_023974AL3907263865572930000
S/G/Y/R/B/O NT_023974AL390726386557293chr9NT_023974AL5915433873861032000002000
S/G/Y/R/B/O NT_023974AL591543387386103chr9NT_023974AL845311389161111003204432044
S/G/Y/R/B/O NT_023974AL591543387386103  AL3564743873861048947055388104335
S/G/Y/R/B/O NT_023974AL845311389161111chr9NT_023974AC0841463892027410000
S/G/Y/R/B/O NT_023974AL845311389161111chr9NT_023974AL354874402293143661800066180
S/G/Y/R/B/O NT_023974AL845311389161111chr9NT_023974AL354874402293143661800066180
S/G/Y/R/B/O NT_023974AL845311389161111chr9NT_023974AL591855393182763663660066366
S/G/Y/R/B/O NT_023974AL845311389161111chr9NT_023974AL591855393182763663660066366
S/G/Y/R/B/O NT_023974AC084146389202741chr9NT_023974AL5904913896709931617405178367957
S/G/Y/R/B/O NT_023974AC084146389202741chr9NT_023974AL954139391131251676320067632
S/G/Y/R/B/O NT_023974AL590491389670993chr9NT_023974AL954139391131251890230089023
S/G/Y/R/B/O NT_023974AL590491389670993chr9NT_023974AL35377039619983311795900117959
S/G/Y/R/B/O NT_023974AL590491389670993  AC011961391131254288505002192906
S/G/Y/R/B/O NT_023974AL954139391131251chr9NT_023974AL590812391713343387450038745
S/G/Y/R/B/O NT_023974AL954139391131251chr9NT_023974AC084146389202741676320067632
S/G/Y/R/B/O NT_023974AL954139391131251chr9NT_023974AL3537703961998336176602130383069
S/G/Y/R/B/O NT_023974AL954139391131251chr9NT_035004AL4455844158006632297805901381991
S/G/Y/R/B/O NT_023974AL954139391131251  AC011961391131252724002801955259
S/G/Y/R/B/O NT_023974AL954139391131251  AC020667391131252158704871470301
S/G/Y/R/B/O NT_023974AL954139391131251  AL596385391713347094701163082577
S/G/Y/R/B/O NT_023974AL590812391713343chr9NT_023974AC02262639236472180729085371620873
S/G/Y/R/B/O NT_023974AL590812391713343  AC02254439171334197250019725
S/G/Y/R/B/O NT_023974AC022626392364721chr9NT_023974AL5918553931827630000
S/G/Y/R/B/O NT_023974AC022626392364721chr9NT_037735AL9539114177237922669603708663782
S/G/Y/R/B/O NT_023974AC022626392364721  AC02254439113125827902014530236133171
S/G/Y/R/B/O NT_023974AL591855393182763chr9NT_023974AL3537913946949630198401984
S/G/Y/R/B/O NT_023974AL591855393182763chr9NT_023974AL354874402293143883290088329
S/G/Y/R/B/O NT_023974AL591855393182763chr9NT_023974AL845311389161111663660066366
S/G/Y/R/B/O NT_023974AL591855393182763chr9NT_023974AL845311389161111663660066366
S/G/Y/R/B/O NT_023974AL591855393182763  AL92862738916111691432197401475354
S/G/Y/R/B/O NT_023974AL353791394694963chr9NT_023974AL5925253947707830199601996
S/G/Y/R/B/O NT_023974AL592525394770783chr9NT_023974AL3537703961998330000
S/G/Y/R/B/O NT_023974AL592525394770783  AC02586139477078737878959442187167
S/G/Y/R/B/O NT_023974AL353770396199833chr9NT_023974AL1622333975088130200102001
S/G/Y/R/B/O NT_023974AL353770396199833chr9NT_023974AL59049138967099311795900117959
S/G/Y/R/B/O NT_023974AL353770396199833chr9NT_023974AL9541393911312516176602130383069
S/G/Y/R/B/O NT_023974AL353770396199833  AC011961394694968087801293293810
S/G/Y/R/B/O NT_023974AL162233397508813chr9NT_023974AL9538543993688610000
S/G/Y/R/B/O NT_023974AL162233397508813  AC02586139113125200395075299028104
S/G/Y/R/B/O NT_023974AL953854399368861chr9NT_023974AL9541414009772710000
S/G/Y/R/B/O NT_023974AL954141400977271chr9NT_023974AL3548744022931430000
S/G/Y/R/B/O NT_023974AL354874402293143chr9NT_023974AL3551514031614030016431643
S/G/Y/R/B/O NT_023974AL354874402293143chr9NT_023974AL591855393182763883290088329
S/G/Y/R/B/O NT_023974AL354874402293143chr9NT_023974AL845311389161111661800066180
S/G/Y/R/B/O NT_023974AL354874402293143chr9NT_023974AL845311389161111661800066180
S/G/Y/R/B/O NT_023974AL354874402293143  AL92862738916111689660615575121
S/G/Y/R/B/O NT_023974AL355151403161403