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  Chromosome 9 - Clone Overlaps - Single Contig
 
Description of this page Main Reports Page Main Assembly Page Main Overlap Page Whole Chromosome Single Contigs

Line color code:

  • White: overlap with immediately succeeding clone
  • Green: overlap with clone in same contig
  • Pink: overlap with clone in same chromosome, different contig
  • Red: overlap with clone on different chromosome
  • Yellow: overlap with clone not used in assembly
NT_008413 NT_035002 NT_037733 NT_037734 NT_023974 NT_033210 NT_035004 NT_037735
NT_035005 NT_035007 NT_037736 NT_037737 NT_035008 NT_037738 NT_033214 NT_033207
NT_037739 NT_033218 NT_033213 NT_037740 NT_037741 NT_033211 NT_033219 NT_033217
NT_037742 NT_029359 NT_033208 NT_033212 NT_035011 NT_031832 NT_033205 NT_035010
NT_030753 NT_037743 NT_033209 NT_008580 NT_023935 NT_023932 NT_008476 NT_008470
NT_037744 NT_017568 NT_008338 NT_035014 NT_037745 NT_008554 NT_030058 NT_019501
NT_024000 NT_035015 NT_037746 NT_023929


  NT_017568
 
LinksContig1Acc1Start1PhsChr2Contig2Acc2Start2PhsStrong OverlapMedium OverlapWeak OverlapTotal Overlap
S/G/Y/R/B/O NT_017568AL3531411106712233chr9NT_017568AL13702411069069930200002000
S/G/Y/R/B/O NT_017568AL1370241106906993chr9NT_017568AL66996311084812932000002000
S/G/Y/R/B/O NT_017568AL1370241106906993  AC0079401106906991442120612443540917
S/G/Y/R/B/O NT_017568AL1370241106906993  AC032004110690699647471552066299
S/G/Y/R/B/O NT_017568AL6699631108481293chr9NT_017568AL13328211084934232000002000
S/G/Y/R/B/O NT_017568AL1332821108493423chr9NT_017568AL133284110977868300100100
S/G/Y/R/B/O NT_017568AL1332821108493423  AC00794011069069912263000122630
S/G/Y/R/B/O NT_017568AL1332821108493423  AC0320041106906996891013255750189666
S/G/Y/R/B/O NT_017568AL1332841109778683chr9NT_017568AL157829111133234300100100
S/G/Y/R/B/O NT_017568AL1332841109778683  AC0154641108481296557201848984061
S/G/Y/R/B/O NT_017568AL1578291111332343chr9NT_017568AL392085111295709300100100
S/G/Y/R/B/O NT_017568AL1578291111332343  AC015464111133234910093836094845
S/G/Y/R/B/O NT_017568AL1578291111332343  AL162589110977868178851365019250
S/G/Y/R/B/O NT_017568AL3920851112957093chr9NT_017568AL3549811114554451464160046416
S/G/Y/R/B/O NT_017568AL3920851112957093  AL16258911113323410564102167107808
S/G/Y/R/B/O NT_017568AL3549811114554451chr9NT_017568AL3556081115663033211990021199
S/G/Y/R/B/O NT_017568AL3549811114554451  AL162589111455445309200030920
S/G/Y/R/B/O NT_017568AL3556081115663033chr9NT_017568AL35879211169889332000002000
S/G/Y/R/B/O NT_017568AL3587921116988933chr9NT_017568AL44564411186382432000002000
S/G/Y/R/B/O NT_017568AL3587921116988933  AL356386111566303322920032292
S/G/Y/R/B/O NT_017568AL4456441118638243chr9NT_017568AL161630111901387300100100
S/G/Y/R/B/O NT_017568AL4456441118638243  AL356386111901387395640039564
S/G/Y/R/B/O NT_017568AL1616301119013873chr9NT_017568AL16027211210225730015861586
S/G/Y/R/B/O NT_017568AL1602721121022573chr9NT_017568AL35475411224723530199701997
S/G/Y/R/B/O NT_017568AL1602721121022573  AC060827111863824224330022433
S/G/Y/R/B/O NT_017568AL3547541122472353chr9NT_017568AL445663112360769300100100
S/G/Y/R/B/O NT_017568AL3547541122472353  AC06082711224723566114464440851111609
S/G/Y/R/B/O NT_017568AL3547541122472353  AC084248112247235155280141616944
S/G/Y/R/B/O NT_017568AL4456631123607693chr9NT_017568AL15883111255289532000002000
S/G/Y/R/B/O NT_017568AL4456631123607693  AC08424811236076984577047155131732
S/G/Y/R/B/O NT_017568AL4456631123607693  AL44506911224723514144700141447
S/G/Y/R/B/O NT_017568AL1588311125528953chr9NT_017568AL36519511271359530200002000
S/G/Y/R/B/O NT_017568AL3651951127135953chr9NT_017568AL44544011280051530016401640
S/G/Y/R/B/O NT_017568AL4454401128005153chr9NT_017568AL35559211296434830199101991
S/G/Y/R/B/O NT_017568AL3555921129643483chr9NT_017568AL58970311313479830000
S/G/Y/R/B/O NT_017568AL5897031131347983chr9NT_017568AL15778011318149532000002000
S/G/Y/R/B/O NT_017568AL1577801131814953chr9NT_017568AL51260211333960930018421842
S/G/Y/R/B/O NT_017568AL5126021133396093chr9NT_017568AL44531011337279630199701997
S/G/Y/R/B/O NT_017568AL4453101133727963chr9NT_017568AL353773113546789300101101
S/G/Y/R/B/O NT_017568AL4453101133727963  AC00623911337279613459300134593
S/G/Y/R/B/O NT_017568AL3537731135467893chr9NT_017568AL138894113638557300100100
S/G/Y/R/B/O NT_017568AL3537731135467893  AC006239113339609599580059958
S/G/Y/R/B/O NT_017568AL1388941136385573chr9NT_017568AL35363011379082330000
S/G/Y/R/B/O NT_017568AL3536301137908233chr9NT_017568AC006288113872289300100100
S/G/Y/R/B/O NT_017568AC0062881138722893chr9NT_017568AL4456831140924073527310052731
S/G/Y/R/B/O NT_017568AL4456831140924073chr9NT_017568AL35493111422007230199201992
S/G/Y/R/B/O NT_017568AL3549311142200723chr9NT_017568AL44198911434488732000002000
S/G/Y/R/B/O NT_017568AL4419891143448873chr9NT_017568AL355589114447955300100100
S/G/Y/R/B/O NT_017568AL3555891144479553chr9NT_017568AL59254911459135430000
S/G/Y/R/B/O NT_017568AL3555891144479553  AC006952114447955532620053262
S/G/Y/R/B/O NT_017568AL5925491145913543chr9NT_017568AL35373611471796730199901999
S/G/Y/R/B/O NT_017568AL3537361147179673chr9NT_017568AL39187011486483932000002000
S/G/Y/R/B/O NT_017568AL3537361147179673  AC006952114717967413560041356
S/G/Y/R/B/O NT_017568AL3537361147179673  AC110007114717967473540047354
S/G/Y/R/B/O NT_017568AL3918701148648393chr9NT_017568AL59064211490921130017941794
S/G/Y/R/B/O NT_017568AL3918701148648393  AC110007114591354416690041669
S/G/Y/R/B/O NT_017568AL5906421149092113chr9NT_017568AL13883611498036030200002000
S/G/Y/R/B/O NT_017568AL5906421149092113  AC1100071149092113123003568566915
S/G/Y/R/B/O NT_017568AL5906421149092113  AL3537611149803604547545361637966390
S/G/Y/R/B/O NT_017568AL1388361149803603chr9NT_017568AL161911115166841300100100
S/G/Y/R/B/O NT_017568AL1388361149803603  AC015881114864839114350013170127520
S/G/Y/R/B/O NT_017568AL1388361149803603  AC110007114864839137450013745
S/G/Y/R/B/O NT_017568AL1388361149803603  AL353761115166841294100029410
S/G/Y/R/B/O NT_017568AL1619111151668413chr9NT_017568AL35479211527591732000002000
S/G/Y/R/B/O NT_017568AL1619111151668413  AC015881114909211263210026321
S/G/Y/R/B/O NT_017568AL3547921152759173chr9NT_017568AC00643011529675530200002000
S/G/Y/R/B/O NT_017568AC0064301152967553chr9NT_017568AL137068115489552300100100
S/G/Y/R/B/O NT_017568AL1370681154895523chr9NT_017568AL51312211563648130000
S/G/Y/R/B/O NT_017568AL5131221156364813chr9NT_017568AL16178411574531132000002000
S/G/Y/R/B/O NT_017568AL5131221156364813  AC0119691152967553395202188955841
S/G/Y/R/B/O NT_017568AL1617841157453113chr9NT_017568AL35964411576258030199801998
S/G/Y/R/B/O NT_017568AL1617841157453113  AC011969115745311191140019114
S/G/Y/R/B/O NT_017568AL3596441157625803chr9NT_017568AL35793611593318030000
S/G/Y/R/B/O NT_017568AL3579361159331803chr9NT_017568AL36527411603870930199701997
S/G/Y/R/B/O NT_017568AL3579361159331803  AL35360911574531110025400100254
S/G/Y/R/B/O NT_017568AL3652741160387093chr9NT_017568AL45028511620865032000002000
S/G/Y/R/B/O NT_017568AL4502851162086503chr9NT_017568AL59624411621890332000002000
S/G/Y/R/B/O NT_017568AL5962441162189033chr9NT_017568AL44558711626037230000
S/G/Y/R/B/O NT_017568AL4455871162603723chr9NT_017568AL44263411643143430000
S/G/Y/R/B/O NT_017568AL4426341164314343chr9NT_017568AL16242311648737730016661666
S/G/Y/R/B/O NT_017568AL1624231164873773chr9NT_017568AL162424116573700300100100
S/G/Y/R/B/O NT_017568AL1624241165737003chr9NT_017568AL35963611679662030000
S/G/Y/R/B/O NT_017568AL1624241165737003  AL3537671164873779922723150101542
S/G/Y/R/B/O NT_017568AL3596361167966203chr9NT_017568AL162254116990456300100100
S/G/Y/R/B/O NT_017568AL3596361167966203  AL3537671169904567240901980292211
S/G/Y/R/B/O NT_017568AL1622541169904563chr9NT_017568AC00631311709987030000
S/G/Y/R/B/O NT_017568AC0063131170998703chr9NT_017568AL35951211720797030199901999
S/G/Y/R/B/O NT_017568AL3595121172079703chr9NT_017568AL73164511726485420199901999
S/G/Y/R/B/O NT_017568AL7316451172648542chr9NT_017568AL35894611745167630000
S/G/Y/R/B/O NT_017568AL7316451172648542  AC00706611726485419078500190785
S/G/Y/R/B/O NT_017568AL3589461174516763chr9NT_017568AL36533811746533630000
S/G/Y/R/B/O NT_017568AL3653381174653363chr9NT_017568AL36550411761356630000
S/G/Y/R/B/O NT_017568AL3655041176135663chr9NT_017568AL44548911776807830199701997
S/G/Y/R/B/O NT_017568AL4454891177680783chr9NT_017568AL16179011794194730198701987
S/G/Y/R/B/O NT_017568AL4454891177680783  AC0107411177680782886202213750999
S/G/Y/R/B/O NT_017568AL1617901179419473chr9NT_017568AL39077411806084312000002000
S/G/Y/R/B/O NT_017568AL1617901179419473  AC01074111761356668326044696113022
S/G/Y/R/B/O NT_017568AL3907741180608431chr9NT_017568AL15820811825579830000
S/G/Y/R/B/O NT_017568AL3907741180608431  AC010741117768078212300021230
S/G/Y/R/B/O NT_017568AL1582081182557983chr9NT_017568AC006450118264142300100100
S/G/Y/R/B/O NT_017568AC0064501182641423chr9NT_017568AL1580521184415973512700051270
S/G/Y/R/B/O NT_017568AC0064501182641423  AL16016411825579813498219812818139781
S/G/Y/R/B/O NT_017568AL1580521184415973chr9NT_017568AL44528411861221432000002000
S/G/Y/R/B/O NT_017568AL1580521184415973  AC02489911826414213670144662001748153
S/G/Y/R/B/O NT_017568AL1580521184415973  AL160164118264142471170047117
S/G/Y/R/B/O NT_017568AL4452841186122143chr9NT_017568AL16272411861420830200002000
S/G/Y/R/B/O NT_017568AL1627241186142083chr9NT_017568AL137846118734750300100100
S/G/Y/R/B/O NT_017568AL1378461187347503chr9NT_017568AL35497911889748932000002000
S/G/Y/R/B/O NT_017568AL3549791188974893chr9NT_017568AL66981811898148632000002000
S/G/Y/R/B/O NT_017568AL3549791188974893  AL1614561187347502209510584741540094
S/G/Y/R/B/O NT_017568AL6698181189814863chr9NT_017568AL15807511904819530200002000
S/G/Y/R/B/O NT_017568AL6698181189814863  AL161456119048195244579219817941855
S/G/Y/R/B/O NT_017568AL1580751190481953chr9NT_017568AL35492811914906230000
S/G/Y/R/B/O NT_017568AL1580751190481953  AL161456118897489171364945246624547
S/G/Y/R/B/O NT_017568AL3549281191490623chr9NT_017568AL45112511932550130000
S/G/Y/R/B/O NT_017568AL4511251193255013chr9NT_017568AL44593011945467330000
S/G/Y/R/B/O NT_017568AL4511251193255013  AC009195118981486191553180022335
S/G/Y/R/B/O NT_017568AL4511251193255013  AL159993118981486817033211318788101
S/G/Y/R/B/O NT_017568AL4459301194546733chr9NT_017568AL35471011962182230018391839
S/G/Y/R/B/O NT_017568AL4459301194546733  AC0091951189814866526036262882097706
S/G/Y/R/B/O NT_017568AL4459301194546733  AL445234119621822196205315791932854
S/G/Y/R/B/O NT_017568AL3547101196218223chr9NT_017568AL62722311975153032000002000
S/G/Y/R/B/O NT_017568AL3547101196218223  AC0261551196218222623502395950194
S/G/Y/R/B/O NT_017568AL3547101196218223  AL445234119621822112174397640522019
S/G/Y/R/B/O NT_017568AL3547101196218223  AL5838231194546735263401225164885
S/G/Y/R/B/O NT_017568AL6272231197515303chr9NT_017568AL35963211984084032000002000
S/G/Y/R/B/O NT_017568AL6272231197515303  AC0261551197515305349401522168715
S/G/Y/R/B/O NT_017568AL6272231197515303  AL5838231198408401551939864987869383
S/G/Y/R/B/O NT_017568AL3596321198408403chr9NT_017568AL16258411993423730199801998
S/G/Y/R/B/O NT_017568AL1625841199342373chr9NT_017568AL35807412009241530018641864
S/G/Y/R/B/O NT_017568AL3580741200924153chr9NT_017568AL62730312019949630200002000
S/G/Y/R/B/O NT_017568AL6273031201994963chr9NT_017568AL44518612026768930199901999
S/G/Y/R/B/O NT_017568AL4451861202676893chr9NT_017568AL58992312042181330199201992
S/G/Y/R/B/O NT_017568AL4451861202676893  AL16238712026768911201106952118963
S/G/Y/R/B/O NT_017568AL5899231204218133chr9NT_017568AL44566412052449832000002000
S/G/Y/R/B/O NT_017568AL5899231204218133  AL162387120199496255170025517
S/G/Y/R/B/O NT_017568AL4456641205244983chr9NT_017568AL16239112068350030000
S/G/Y/R/B/O NT_017568AL1623911206835003chr9NT_017568AC00644312070992030199801998
S/G/Y/R/B/O NT_017568AC0064431207099203chr9NT_017568AL35630912091855630200002000
S/G/Y/R/B/O NT_017568AL3563091209185563chr9NT_017568AL16190812096081132000002000
S/G/Y/R/B/O NT_017568AL1619081209608113chr9NT_017568AL161731121065027300100100
S/G/Y/R/B/O NT_017568AL1617311210650273chr9NT_017568AL35494412124737930199901999
S/G/Y/R/B/O NT_017568AL3549441212473793chr9NT_017568AL16016912129452330199401994
S/G/Y/R/B/O NT_017568AL1601691212945233chr9NT_017568AL35686212141655232000002000
S/G/Y/R/B/O NT_017568AL3568621214165523chr9NT_017568AL35762312156003330199601996
S/G/Y/R/B/O NT_017568AL3576231215600333chr9NT_017568AL45026312159745330199801998
S/G/Y/R/B/O NT_017568AL3576231215600333  AL354705121560033203830020383
S/G/Y/R/B/O NT_017568AL4502631215974533chr9NT_017568AL445222121753125300100100
S/G/Y/R/B/O NT_017568AL4502631215974533  AL35470512159745314227100142271
S/G/Y/R/B/O NT_017568AL4452221217531253chr9NT_017568AL39011612197839530199601996
S/G/Y/R/B/O NT_017568AL3901161219783953chr9NT_017568AL16242612199749730000
S/G/Y/R/B/O NT_017568AL1624261219974973chr9NT_017568AL16258612215883530199901999
S/G/Y/R/B/O NT_017568AL1624261219974973  AC00743012175312514579405197150991
S/G/Y/R/B/O NT_017568AL1625861221588353chr9NT_017568AL15793512223747732000002000
S/G/Y/R/B/O NT_017568AL1625861221588353  AC007430122158835202150020215
S/G/Y/R/B/O NT_017568AL1625861221588353  AC119725122158835186940018694
S/G/Y/R/B/O NT_017568AL1579351222374773chr9NT_017568AL360268122399678300303303
S/G/Y/R/B/O NT_017568AL1579351222374773  AC11972512199749778601568227548111831
S/G/Y/R/B/O NT_017568AL3602681223996783chr9NT_017568AL59070812250950532000002000
S/G/Y/R/B/O NT_017568AL5907081225095053chr9NT_017568AL59072212270156130000
S/G/Y/R/B/O NT_017568AL5907081225095053  AC006312122509505555380055538
S/G/Y/R/B/O NT_017568AL5907221227015613chr9NT_017568AL35909112271161430200002000
S/G/Y/R/B/O NT_017568AL3590911227116143chr9NT_017568AL44528712289405732000002000
S/G/Y/R/B/O NT_017568AL3590911227116143  AC00631212271161414402600144026
S/G/Y/R/B/O NT_017568AL4452871228940573chr9NT_017568AL35648112293017330000
S/G/Y/R/B/O NT_017568AL3564811229301733chr9NT_017568AL35967812310383932000002000
S/G/Y/R/B/O NT_017568AL3596781231038393chr9NT_017568AL44199212311022330200002000
S/G/Y/R/B/O NT_017568AL4419921231102233chr9NT_017568AL67214212327488730016581658
S/G/Y/R/B/O NT_017568AL6721421232748873chr9NT_017568AL59221112340506632000002000
S/G/Y/R/B/O NT_017568AL6721421232748873  AL1361081697935793853725353868979761
S/G/Y/R/B/O NT_017568AL5922111234050663chr9NT_017568AL15815112350132830199701997
S/G/Y/R/B/O NT_017568AL1581511235013283chr9NT_017568AL16178512366377332000002000
S/G/Y/R/B/O NT_017568AL1617851236637733chr9NT_017568AL35380312373523632000002000
S/G/Y/R/B/O NT_017568AL3538031237352363chr9NT_017568AL39105612389893232000002000
S/G/Y/R/B/O NT_017568AL3538031237352363  AC0730751237352364509904606791166
S/G/Y/R/B/O NT_017568AL3910561238989323chr9NT_017568AL59036912402639430199601996
S/G/Y/R/B/O NT_017568AL3910561238989323  AC0077791238989323030117183426466283
S/G/Y/R/B/O NT_017568AL3910561238989323  AC073075123898932114130011413
S/G/Y/R/B/O NT_017568AL5903691240263943chr9NT_017568AL59221912415015032000002000
S/G/Y/R/B/O NT_017568AL5903691240263943  AC0077791240263947788338111112192815
S/G/Y/R/B/O NT_017568AL5903691240263943  AC015667124026394731584954555883670
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