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  Chromosome 7 - Genetic Maps - Single Contig
 

Chromosome 7 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_007688
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007688AC1054431310187831        
S/G/Y/R/B/O NT_007688AC0931821310698771        
S/G/Y/R/B/O NT_007688AC0095181311196093        
S/G/Y/R/B/O NT_007688AC0080851312107833        
S/G/Y/R/B/O NT_007688AC0931061313880691        
S/G/Y/R/B/O NT_007688AC0168311314049493        
S/G/Y/R/B/O NT_007688AC0587911315977173        
S/G/Y/R/B/O NT_007688AC0134341318350593AFM240XE97138.007136.061 AC011885, AC013434
S/G/Y/R/B/O NT_007688AC0134341318370153GATA145G10  7134.551 AC011885, AC013434
S/G/Y/R/B/O NT_007688AC0093621319131913AFM338WD57138.107136.061 AC009362, AC023959
S/G/Y/R/B/O NT_007688AC0186421319990963        
S/G/Y/R/B/O NT_007688AC0097831321197823        
S/G/Y/R/B/O NT_007688AC0082641321779323        
S/G/Y/R/B/O NT_007688AC0237741323161871        
S/G/Y/R/B/O NT_007688AC0186431324562193AFM214YB27137.907136.061 AC018643
S/G/Y/R/B/O NT_007688AC0093641325748293        
S/G/Y/R/B/O NT_007688AC0116251326616273        
S/G/Y/R/B/O NT_007688AC0097851328725993GATA43C11  7136.951AC026239, AC009723, AC009785, AC026239
S/G/Y/R/B/O NT_007688AC0262391329038073        
S/G/Y/R/B/O NT_007688AC0093651330192203        
S/G/Y/R/B/O NT_007688AC0931451331374791        
S/G/Y/R/B/O NT_007688AC0080381332326553AFM220YG17139.707137.831 AC008038
S/G/Y/R/B/O NT_007688AC0838731333460753        
S/G/Y/R/B/O NT_007688AC0931461334532313        
S/G/Y/R/B/O NT_007688AC0838751334833603        
S/G/Y/R/B/O NT_007688AC0240861336331733        
S/G/Y/R/B/O NT_007688AC0093581337580893        
S/G/Y/R/B/O NT_007688AC0091781337935743        
S/G/Y/R/B/O NT_007688AC0077901340167413AFMA282WF97140.507138.421 AC007790
S/G/Y/R/B/O NT_007688AC0091801340971773GGAT2A03  7138.421 AC009180
S/G/Y/R/B/O NT_007688AC0091801341308903AFMA205YB17140.607138.421 AC009180
S/G/Y/R/B/O NT_007688AC0091801341538103AFM310YF97140.507138.421 AC009180
S/G/Y/R/B/O NT_007688AC0931471342183743        
S/G/Y/R/B/O NT_007688AC0838721342301533        
S/G/Y/R/B/O NT_007688AC0186461345038663AFM164WG97139.607138.421AC008154, AC008154, AC018646
S/G/Y/R/B/O NT_007688AC0186461345327543AFM183XE117139.707138.421AC008154, AC008154, AC018646
S/G/Y/R/B/O NT_007688AC0081541345878653        
S/G/Y/R/B/O NT_007688AC0092751346653373        
S/G/Y/R/B/O NT_007688AC0788471347422763        
S/G/Y/R/B/O NT_007688AC0092761348796303        
S/G/Y/R/B/O NT_007688AC0838741350219513AFM087ZF117140.607138.421AC019014, AC019014, AC083874
S/G/Y/R/B/O NT_007688AC0190141350561793        
S/G/Y/R/B/O NT_007688AC0838701351771323        
S/G/Y/R/B/O NT_007688AC0904971352724343        
S/G/Y/R/B/O NT_007688AC0838621354100613        
S/G/Y/R/B/O NT_007688AC0095421355294493MFD327  7140.631AC009330, AC009330
S/G/Y/R/B/O NT_007688AC0093301355918383        
S/G/Y/R/B/O NT_007688AC0931431356090613        
S/G/Y/R/B/O NT_007688AC0093311357015653AFM198ZH87142.907140.631AC083871, AC009331, AC074002, AC083871
S/G/Y/R/B/O NT_007688AC0838711357851153        


  NT_007688 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007688AC0931071358330593        
S/G/Y/R/B/O NT_007688AC0917361360139813        
S/G/Y/R/B/O NT_007688AC0159871360987263        
S/G/Y/R/B/O NT_007688AC0240831362654893        
S/G/Y/R/B/O NT_007688AC0240841363342093        
S/G/Y/R/B/O NT_007688AC0097841364912273        
S/G/Y/R/B/O NT_007688AC0788451365972943        
S/G/Y/R/B/O NT_007688AC0931481367238533        
S/G/Y/R/B/O NT_007688AC0095411367373903        
S/G/Y/R/B/O NT_007688AC0838691368862643        
S/G/Y/R/B/O NT_007688AC1085101369508501        
S/G/Y/R/B/O NT_007688AC0092641370359263        
S/G/Y/R/B/O NT_007688AC0205811372007503        
S/G/Y/R/B/O NT_007688AC0093291373485333        
S/G/Y/R/B/O NT_007688AC0095171373613383        
S/G/Y/R/B/O NT_007688AC0187281374940393        
S/G/Y/R/B/O NT_007688AC0788421376716663        
S/G/Y/R/B/O NT_007688AC0904981377117353        
S/G/Y/R/B/O NT_007688AC0091791378930163AFM203WG17145.807143.331 AC009179, AC073250
S/G/Y/R/B/O NT_007688AC0092451379765593        
S/G/Y/R/B/O NT_007688AC0221731381013593        
S/G/Y/R/B/O NT_007688AC0092631382371813        
S/G/Y/R/B/O NT_007688AC0240821383342953        
S/G/Y/R/B/O NT_007688AC0838671384498683        
S/G/Y/R/B/O NT_007688AC0081551385896763AFM168XC37147.007144.721AC025593, AC008155, AC025593
S/G/Y/R/B/O NT_007688AC0255931386715263        
S/G/Y/R/B/O NT_007688AC0082651387753653AFMA081TB97147.607145.341AC013429, AC008265, AC013429
S/G/Y/R/B/O NT_007688AC0134291388985663AFMA275YC17148.607146.281AC020983, AC013429, AC020983
S/G/Y/R/B/O NT_007688AC0209831389234273        
S/G/Y/R/B/O NT_007688AC0186631391257583AFM312WB57149.607147.221 AC018663
S/G/Y/R/B/O NT_007688AC0931441391279403        
S/G/Y/R/B/O NT_007688AC0838681391707323        
S/G/Y/R/B/O NT_007688AC0186441393693163AFMB350WG97150.307148.111 AC018644, AC079986
S/G/Y/R/B/O NT_007688AC0092201395694093AFMA349YG57150.307148.111 AC009220
S/G/Y/R/B/O NT_007688AC0838801396025893        
S/G/Y/R/B/O NT_007688AC0838831396390753        
S/G/Y/R/B/O NT_007688AC0055311396972753        
S/G/Y/R/B/O NT_007688AC0731841398571853