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  Chromosome 7 - Genetic Maps - Single Contig
 

Chromosome 7 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_033965
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033965AC073109116330183        
S/G/Y/R/B/O NT_033965AC092213117913583        
S/G/Y/R/B/O NT_033965AC007270119265953        
S/G/Y/R/B/O NT_033965AC007745120052953UT5023  717.171 AC007745
S/G/Y/R/B/O NT_033965AC007321120509023        
S/G/Y/R/B/O NT_033965AC013470122094723        
S/G/Y/R/B/O NT_033965AC092064123799953        
S/G/Y/R/B/O NT_033965AC005281123946593        
S/G/Y/R/B/O NT_033965AC073232125000973        
S/G/Y/R/B/O NT_033965AC011891125031433        
S/G/Y/R/B/O NT_033965AC005228125764243        
S/G/Y/R/B/O NT_033965AC006000126782323        
S/G/Y/R/B/O NT_033965AC007243128022023        
S/G/Y/R/B/O NT_033965AC005681129283933        
S/G/Y/R/B/O NT_033965AC006996130581823        
S/G/Y/R/B/O NT_033965AC011287132068013        
S/G/Y/R/B/O NT_033965AC084312133395443        
S/G/Y/R/B/O NT_033965AC073327133614043        
S/G/Y/R/B/O NT_033965AC011288135072083AFM281VC9721.00720.841 AC011288
S/G/Y/R/B/O NT_033965AC005019135844103        
S/G/Y/R/B/O NT_033965AC004857137378623        
S/G/Y/R/B/O NT_033965AC004909138470213        
S/G/Y/R/B/O NT_033965AC005039139788713        
S/G/Y/R/B/O NT_033965AC005248141299873        
S/G/Y/R/B/O NT_033965AC011229141982513        
S/G/Y/R/B/O NT_033965AC105459143030913        
S/G/Y/R/B/O NT_033965AC073258144471893        
S/G/Y/R/B/O NT_033965AC006150146013133        
S/G/Y/R/B/O NT_033965AC006045147141983        
S/G/Y/R/B/O NT_033965AC006458149071243        
S/G/Y/R/B/O NT_033965AC091789150892833AFMA067WD5723.70723.291 AC091789
S/G/Y/R/B/O NT_033965AC099651151583863        
S/G/Y/R/B/O NT_033965AC099412152773713        
S/G/Y/R/B/O NT_033965AC012061153210723        
S/G/Y/R/B/O NT_033965AC004452154007423        
S/G/Y/R/B/O NT_033965AC005550154827723        
S/G/Y/R/B/O NT_033965AC006041156158093        
S/G/Y/R/B/O NT_033965AC005536157023673        
S/G/Y/R/B/O NT_033965AC074006158676943        
S/G/Y/R/B/O NT_033965AC006035158740903        
S/G/Y/R/B/O NT_033965AC073629160562623        
S/G/Y/R/B/O NT_033965AC004741160901433        
S/G/Y/R/B/O NT_033965AC079155162021853        
S/G/Y/R/B/O NT_033965AC005014163255573        
S/G/Y/R/B/O NT_033965AC073201164918043        
S/G/Y/R/B/O NT_033965AC073333165523803        
S/G/Y/R/B/O NT_033965AC098592167177963        
S/G/Y/R/B/O NT_033965AC010749169064973        
S/G/Y/R/B/O NT_033965AC073332169269943        
S/G/Y/R/B/O NT_033965AC092099170589853        


  NT_033965 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033965AC003075170902193        
S/G/Y/R/B/O NT_033965AC019117172115553        
S/G/Y/R/B/O NT_033965AC017060173993793AFMB355WG1728.00727.661 AC017060
S/G/Y/R/B/O NT_033965AC017060174141693AFM200WE7729.10728.741 AC017060
S/G/Y/R/B/O NT_033965AC006482174517373        
S/G/Y/R/B/O NT_033965AC073205176321053        
S/G/Y/R/B/O NT_033965AC080080177818193        
S/G/Y/R/B/O NT_033965AC092200179347383        
S/G/Y/R/B/O NT_033965AC074193179407193        
S/G/Y/R/B/O NT_033965AC005249181016303GATA137H02  729.281 AC011075
S/G/Y/R/B/O NT_033965AC091697181454303        
S/G/Y/R/B/O NT_033965AC010082182059643AFM113XC11729.60729.281 AC010082, AC011075, AL358872
S/G/Y/R/B/O NT_033965AC002433183087523        
S/G/Y/R/B/O NT_033965AC002124184484713        
S/G/Y/R/B/O NT_033965AC002088185850463AFM217YB6729.60729.281AC016186, AC002088, AC007555, AC016186
S/G/Y/R/B/O NT_033965AC002088186300283AFM080YG1729.60729.281 AC002088
S/G/Y/R/B/O NT_033965AC002410186348213        
S/G/Y/R/B/O NT_033965AC004994187308383        
S/G/Y/R/B/O NT_033965AC004744188109693        
S/G/Y/R/B/O NT_033965AC003073188963483        
S/G/Y/R/B/O NT_033965AC003986190192023AFMB320VF9728.00729.281 AC003986
S/G/Y/R/B/O NT_033965AC006381191925943AFMA072ZF5729.60729.281 AC006381
S/G/Y/R/B/O NT_033965AC007091192809623AFM199XC3729.60729.281 AC007091
S/G/Y/R/B/O NT_033965AC006397194363463GATA2G04  729.281 AC006397
S/G/Y/R/B/O NT_033965AC004940195224073        
S/G/Y/R/B/O NT_033965AC004543195727153        
S/G/Y/R/B/O NT_033965AC003990196946363        
S/G/Y/R/B/O NT_033965AC005062197997633AFM102XG7729.60729.281 AC005062
S/G/Y/R/B/O NT_033965AC007001198929573        
S/G/Y/R/B/O NT_033965AC005083200349013AFM107YH2731.20730.901 AC005083
S/G/Y/R/B/O NT_033965AC099342201472603        
S/G/Y/R/B/O NT_033965AC004130201750123        
S/G/Y/R/B/O NT_033965AC003091202892273        
S/G/Y/R/B/O NT_033965AC007095204268443        
S/G/Y/R/B/O NT_033965AC002486205223573GATA85B06  733.091AC005060, AC005060
S/G/Y/R/B/O NT_033965AC005060205225553        
S/G/Y/R/B/O NT_033965AC005251206616013AFM347ZB9733.40733.051 AC005251
S/G/Y/R/B/O NT_033965AC007090207349603        
S/G/Y/R/B/O NT_033965AC080068208029893        
S/G/Y/R/B/O NT_033965AC006481208636123        
S/G/Y/R/B/O NT_033965AC093649210116643        
S/G/Y/R/B/O NT_033965AC078791210264753        
S/G/Y/R/B/O NT_033965AC005094211083733        
S/G/Y/R/B/O NT_033965AC004595213025583AFMA085YG9734.50734.151 AC004595
S/G/Y/R/B/O NT_033965AC102952214022213        
S/G/Y/R/B/O NT_033965AC073102214408083        
S/G/Y/R/B/O NT_033965AC013481215198173        
S/G/Y/R/B/O NT_033965AC005078216221883AFM162XA7735.00734.691 AC005078, AC092097
S/G/Y/R/B/O NT_033965AC004002216231483        
S/G/Y/R/B/O NT_033965AC099653217352623        


  NT_033965 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033965AC074379217815923        
S/G/Y/R/B/O NT_033965AC005079218915513GATA21B01  736.031 AC004937, AC005079
S/G/Y/R/B/O NT_033965AC005079219081263AFMA302VD5736.60736.031 AC005055, AC005079
S/G/Y/R/B/O NT_033965AC005079219945833AFMB362ZF1736.70737.511 AC005059, AC005079
S/G/Y/R/B/O NT_033965AC099759222219533        
S/G/Y/R/B/O NT_033965AC005061223219083        
S/G/Y/R/B/O NT_033965AC002480223524393        
S/G/Y/R/B/O NT_033965AC091800225524063        
S/G/Y/R/B/O NT_033965AC073072225827383IL6  736.031 AC073072, AF372214
S/G/Y/R/B/O NT_033965AC073072226309983AFM165XB10736.70737.511 AC073072
S/G/Y/R/B/O NT_033965AC005682226848153UT5947  729.281 AC005682
S/G/Y/R/B/O NT_033965AC083802228241131        
S/G/Y/R/B/O NT_033965AC016186228292231        
S/G/Y/R/B/O NT_033965AC012094229026291        
S/G/Y/R/B/O NT_033965AC006039229961903AFM311XC5737.70737.261 AC006039
S/G/Y/R/B/O NT_033965AC006039230496793GATA137A12  737.511 AC006039
S/G/Y/R/B/O NT_033965AC073992230947393        
S/G/Y/R/B/O NT_033965AC005082231150603        
S/G/Y/R/B/O NT_033965AC021876232845993        
S/G/Y/R/B/O NT_033965AC079780233890673        
S/G/Y/R/B/O NT_033965AC023105234414463        
S/G/Y/R/B/O NT_033965AC006026235565263AFM044XB8738.80738.481 AC006026
S/G/Y/R/B/O NT_033965AC008176236599813        
S/G/Y/R/B/O NT_033965AC003087237601513AFM290VG9738.80738.481 AC003087
S/G/Y/R/B/O NT_033965AC009508238533273        
S/G/Y/R/B/O NT_033965AC009308239725413        
S/G/Y/R/B/O NT_033965AC004485240805233        
S/G/Y/R/B/O NT_033965AC005097242658393        
S/G/Y/R/B/O NT_033965AC003044243290543AFMA224WC1739.30739.021 AC003044
S/G/Y/R/B/O NT_033965AC002530243477433        
S/G/Y/R/B/O NT_033965AC079878244569323        
S/G/Y/R/B/O NT_033965AC005084244672363        
S/G/Y/R/B/O NT_033965AC003093246449373        
S/G/Y/R/B/O NT_033965AC004016248056583AFM234YD4739.30739.021 AC004016
S/G/Y/R/B/O NT_033965AC004239248786723        
S/G/Y/R/B/O NT_033965AC004008248839593        
S/G/Y/R/B/O NT_033965AC079876249741483        
S/G/Y/R/B/O NT_033965AC004694250364483GATA28C09  739.021 AC004694
S/G/Y/R/B/O NT_033965AC007487250542503ATA1B04  739.021 AC007487
S/G/Y/R/B/O NT_033965AC004129251913663AFMA300WC9739.30739.021 AC083852
S/G/Y/R/B/O NT_033965AC003985252976093AFM248ZD1740.10739.821 AC003985
S/G/Y/R/B/O NT_033965AC005100253432313        
S/G/Y/R/B/O NT_033965AC091705255010223AFM347TF1740.90740.622 AC091705, AL451002
S/G/Y/R/B/O NT_033965AC003090255224723        
S/G/Y/R/B/O NT_033965AC005165256147293        
S/G/Y/R/B/O NT_033965AC018706258445313AFMA245ZD5740.90740.621 AC018706
S/G/Y/R/B/O NT_033965AC010719258711043        
S/G/Y/R/B/O NT_033965AC004520260739253AFMA040XC1741.50741.161 AC004520
S/G/Y/R/B/O NT_033965AC010677261438063        
S/G/Y/R/B/O NT_033965AC074295262562653        


  NT_033965 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033965AC004540263224683        
S/G/Y/R/B/O NT_033965AC004947264540253        
S/G/Y/R/B/O NT_033965AC003999266712153AFMA212YB1742.10741.691 AC003999
S/G/Y/R/B/O NT_033965AC011299267110863        
S/G/Y/R/B/O NT_033965AC091698268585983        
S/G/Y/R/B/O NT_033965AC073472268704333        
S/G/Y/R/B/O NT_033965AC004079269691763        
S/G/Y/R/B/O NT_033965AC010990270716933        
S/G/Y/R/B/O NT_033965AC004080270782013        
S/G/Y/R/B/O NT_033965AC004996272470833AFMA103WA5742.10741.691 AC004996
S/G/Y/R/B/O NT_033965AC004996272816973AFMA217WH5741.50741.691 AC004996
S/G/Y/R/B/O NT_033965AC004009273080773        
S/G/Y/R/B/O NT_033965AC073150273886423        
S/G/Y/R/B/O NT_033965AC007130275467753AFM109XG9742.10741.691 AC007130
S/G/Y/R/B/O NT_033965AC005091276096693        
S/G/Y/R/B/O NT_033965AC004549277200043        
S/G/Y/R/B/O NT_033965AC004007278436953        
S/G/Y/R/B/O NT_033965AC004885279492533GGAA3F06  741.691 AC004885
S/G/Y/R/B/O NT_033965AC004885281094453AFM224XG5742.10741.691 AC055735
S/G/Y/R/B/O NT_033965AC005017281122393        
S/G/Y/R/B/O NT_033965AC006367282492153        
S/G/Y/R/B/O NT_033965AC006980283794843        
S/G/Y/R/B/O NT_033965AC003074284051953        
S/G/Y/R/B/O NT_033965AC006331285488733        
S/G/Y/R/B/O NT_033965AC027122285551851        
S/G/Y/R/B/O NT_033965 - GATA124D01  734.150  
S/G/Y/R/B/O NT_033965 - AFM317VF1740.90740.621 AL451002
S/G/Y/R/B/O NT_033965 - AFMA112WG9742.10741.690