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Chromosome 7 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_033967
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033967AC00643317497743        
S/G/Y/R/B/O NT_033967AC00528219293373        
S/G/Y/R/B/O NT_033967AC00497119399163        
S/G/Y/R/B/O NT_033967AC00484021833093AFM185YH2  73.131 AC004840
S/G/Y/R/B/O NT_033967AC00484021833093AFM185YH272.90  1 AC004840
S/G/Y/R/B/O NT_033967AC09248822121663        
S/G/Y/R/B/O NT_033967AC07346223016013        
S/G/Y/R/B/O NT_033967AC00602823493493        
S/G/Y/R/B/O NT_033967AC00490625604343UT626  713.371 AC004906, AC025680
S/G/Y/R/B/O NT_033967AC00490626439043AFMB286YC574.8075.281 AC004906
S/G/Y/R/B/O NT_033967AC09268926573063        
S/G/Y/R/B/O NT_033967AC02402827566483AFMC027XB574.8075.281 AC024028
S/G/Y/R/B/O NT_033967AC09180128574313        
S/G/Y/R/B/O NT_033967AC07331628809933AFM254YC974.8075.281 AC073316
S/G/Y/R/B/O NT_033967AC09242730114473        
S/G/Y/R/B/O NT_033967AC06928630638433        
S/G/Y/R/B/O NT_033967AC07923132189613        
S/G/Y/R/B/O NT_033967AC01128433058083        
S/G/Y/R/B/O NT_033967AC00498434957413AFMA136ZH174.8075.281 AC004984
S/G/Y/R/B/O NT_033967AC00493535481323        
S/G/Y/R/B/O NT_033967AC01596836468673        
S/G/Y/R/B/O NT_033967AC07355037753053        
S/G/Y/R/B/O NT_033967AC01700038206673        
S/G/Y/R/B/O NT_033967AC00488740987323MFD172  77.441 AC004887
S/G/Y/R/B/O NT_033967AC01689841515833GATA24F03  77.441 AC016898
S/G/Y/R/B/O NT_033967AC01689841566453AFM225XA177.8077.441 AC016898
S/G/Y/R/B/O NT_033967AC10406042311573        
S/G/Y/R/B/O NT_033967AC07205442740473AFMA224WH977.8077.981 AC072054
S/G/Y/R/B/O NT_033967AC07205443594273AFM210XC777.8077.441 AC072054
S/G/Y/R/B/O NT_033967AC09242844053823        
S/G/Y/R/B/O NT_033967AC09261044452051        
S/G/Y/R/B/O NT_033967AC05354646052233        
S/G/Y/R/B/O NT_033967AC09203246274613        
S/G/Y/R/B/O NT_033967AC09202848018593        
S/G/Y/R/B/O NT_033967AC09337648780263        
S/G/Y/R/B/O NT_033967AC09362051029423AFMB040ZB5710.60710.681 AC093620
S/G/Y/R/B/O NT_033967AC09217151213713        
S/G/Y/R/B/O NT_033967AC00648352892763GATA61G06  710.681 AY044229
S/G/Y/R/B/O NT_033967AC00816753989103        
S/G/Y/R/B/O NT_033967AC00498355392733        
S/G/Y/R/B/O NT_033967AC00599556620943        
S/G/Y/R/B/O NT_033967AC00489557899013AFM049XE3710.60710.681 AC069393
S/G/Y/R/B/O NT_033967AC09243958946313        
S/G/Y/R/B/O NT_033967AC00941259281813        
S/G/Y/R/B/O NT_033967AC07205261390083        
S/G/Y/R/B/O NT_033967AC07974262758823        
S/G/Y/R/B/O NT_033967AC07334363151113        
S/G/Y/R/B/O NT_033967AC07988264870783        
S/G/Y/R/B/O NT_033967AC07980465445053        
S/G/Y/R/B/O NT_033967AC09210467270173        


  NT_033967 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033967AC01123067795193        
S/G/Y/R/B/O NT_033967AC00553268688303        
S/G/Y/R/B/O NT_033967AC07944869845843        
S/G/Y/R/B/O NT_033967AC00635670815123AFMA062YF9713.40713.371 AC006356
S/G/Y/R/B/O NT_033967AC00940271528123        
S/G/Y/R/B/O NT_033967AC00498271852453        
S/G/Y/R/B/O NT_033967AC00494873150723        
S/G/Y/R/B/O NT_033967AC00716173915343UT7600  713.371 AC007161
S/G/Y/R/B/O NT_033967AC00716174764283AFMC011YC9713.40713.371 AC007161
S/G/Y/R/B/O NT_033967AC00947374990913        
S/G/Y/R/B/O NT_033967AC00646575385853        
S/G/Y/R/B/O NT_033967AC00604276401533        
S/G/Y/R/B/O NT_033967AC00700978183143        
S/G/Y/R/B/O NT_033967AC00712879706373        
S/G/Y/R/B/O NT_033967AC00486180786263        
S/G/Y/R/B/O NT_033967AC00445782124973        
S/G/Y/R/B/O NT_033967AC00461383724753AFM224YB6715.20715.271 AC004613
S/G/Y/R/B/O NT_033967AC00474084614833        
S/G/Y/R/B/O NT_033967AC00950085885523        
S/G/Y/R/B/O NT_033967AC00716486429063        
S/G/Y/R/B/O NT_033967AC00485288842603ATA1A10  717.171 AC004852, AC013540
S/G/Y/R/B/O NT_033967AC07434788909093        
S/G/Y/R/B/O NT_033967AC09246490244003        
S/G/Y/R/B/O NT_033967AC07999691336793GATA119B03  717.171 AC079996
S/G/Y/R/B/O NT_033967AC07975691435673        
S/G/Y/R/B/O NT_033967AC09655393099143        
S/G/Y/R/B/O NT_033967AC09658093741433        
S/G/Y/R/B/O NT_033967AC06083493849993        
S/G/Y/R/B/O NT_033967AC00636394991543AFM098XA9717.10717.171 AC006363
S/G/Y/R/B/O NT_033967AC01099195644763        
S/G/Y/R/B/O NT_033967AC00493697339453AFM198YG5717.10717.741 AC004936, AC092847
S/G/Y/R/B/O NT_033967AC00637397570073        
S/G/Y/R/B/O NT_033967AC00487998441303        
S/G/Y/R/B/O NT_033967AC01128299788343        
S/G/Y/R/B/O NT_033967AC073098100647403        
S/G/Y/R/B/O NT_033967AC009945101219473        
S/G/Y/R/B/O NT_033967AC004949101972643        
S/G/Y/R/B/O NT_033967AC004415103694303        
S/G/Y/R/B/O NT_033967AC004535104059693        
S/G/Y/R/B/O NT_033967AC005376105152383        
S/G/Y/R/B/O NT_033967AC007029105973293        
S/G/Y/R/B/O NT_033967AC104089106924743        
S/G/Y/R/B/O NT_033967AC005007106993283        
S/G/Y/R/B/O NT_033967AC080064108341893        
S/G/Y/R/B/O NT_033967AC004538109143383        
S/G/Y/R/B/O NT_033967AC004160109954173        
S/G/Y/R/B/O NT_033967AC004141111389683        
S/G/Y/R/B/O NT_033967AC004614112713233AFM217YC5  717.741 AC004614
S/G/Y/R/B/O NT_033967 - UT5023  717.171AC007745, AC007745