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  Chromosome 7 - Genetic Maps - Single Contig
 

Chromosome 7 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_017168
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_017168AC005045831212033        
S/G/Y/R/B/O NT_017168AC006154832451503        
S/G/Y/R/B/O NT_017168AC005068832681293        
S/G/Y/R/B/O NT_017168AC002457833664013        
S/G/Y/R/B/O NT_017168AC003083835435813        
S/G/Y/R/B/O NT_017168AC005164836802043        
S/G/Y/R/B/O NT_017168AC004992838033363        
S/G/Y/R/B/O NT_017168AC005075838960053        
S/G/Y/R/B/O NT_017168AC003991840141393        
S/G/Y/R/B/O NT_017168AC006149841322523        
S/G/Y/R/B/O NT_017168AC006005842040623        
S/G/Y/R/B/O NT_017168AC002069842299683        
S/G/Y/R/B/O NT_017168AC006988843883053        
S/G/Y/R/B/O NT_017168AC002127846161433AFM165YH12798.70798.441 AC002127
S/G/Y/R/B/O NT_017168AC074253846395003        
S/G/Y/R/B/O NT_017168AC004746846436913        
S/G/Y/R/B/O NT_017168AC002068848017843        
S/G/Y/R/B/O NT_017168AC004015848602303        
S/G/Y/R/B/O NT_017168AC079744850042693        
S/G/Y/R/B/O NT_017168AC006350850060913        
S/G/Y/R/B/O NT_017168AC002382851028493        
S/G/Y/R/B/O NT_017168AC002383852282393        
S/G/Y/R/B/O NT_017168AC003082853257323        
S/G/Y/R/B/O NT_017168AC004110854956683        
S/G/Y/R/B/O NT_017168AC002541854974153        
S/G/Y/R/B/O NT_017168AC006155857391893AFM158XA17100.507100.051 AC006155
S/G/Y/R/B/O NT_017168AC006155857702803GATA156A05  7100.051 AC006155
S/G/Y/R/B/O NT_017168AC005053857839943        
S/G/Y/R/B/O NT_017168AC004969859702653        
S/G/Y/R/B/O NT_017168AC002064860097523        
S/G/Y/R/B/O NT_017168AC006153861657663        
S/G/Y/R/B/O NT_017168AC002456862552443        
S/G/Y/R/B/O NT_017168AC003076864114433        
S/G/Y/R/B/O NT_017168AC000059864269423        
S/G/Y/R/B/O NT_017168AC002065865518683AFMA218ZE57101.207100.811 AC002065
S/G/Y/R/B/O NT_017168AC002065865804403UT1951  797.381 AC002065
S/G/Y/R/B/O NT_017168AC006036866517943        
S/G/Y/R/B/O NT_017168AC017036868084343        
S/G/Y/R/B/O NT_017168AC002458868720123UT2206  7104.861 AC002458, AC073458
S/G/Y/R/B/O NT_017168AC000057869114083        
S/G/Y/R/B/O NT_017168AC084381869898393        
S/G/Y/R/B/O NT_017168AC095042871175663        
S/G/Y/R/B/O NT_017168AC079760871693493        
S/G/Y/R/B/O NT_017168AC007313872971573        
S/G/Y/R/B/O NT_017168AC079875874143033        
S/G/Y/R/B/O NT_017168AC000058874215523        
S/G/Y/R/B/O NT_017168AC002564874686713AFMA202XA57104.707103.631 AC002564
S/G/Y/R/B/O NT_017168AC000056875618913        
S/G/Y/R/B/O NT_017168AC003086877252413ATA24A12  7103.631 AC003086, AC092792
S/G/Y/R/B/O NT_017168AC000066877567233        


  NT_017168 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_017168AC004013879041583ACT3E08  7103.631 AC004013, AJ010770
S/G/Y/R/B/O NT_017168AC000120879103883        
S/G/Y/R/B/O NT_017168AC000118880525843        
S/G/Y/R/B/O NT_017168AC004539881490093        
S/G/Y/R/B/O NT_017168AC007566881862813        
S/G/Y/R/B/O NT_017168AC005156883352753        
S/G/Y/R/B/O NT_017168AC000065884089743        
S/G/Y/R/B/O NT_017168AC004128884910353        
S/G/Y/R/B/O NT_017168AC004011885847393        
S/G/Y/R/B/O NT_017168AC002454887766963AFM240VE37104.707105.921 AC002454, AC005025
S/G/Y/R/B/O NT_017168AC000119888958993AFM333WF57105.207104.861 AC000119
S/G/Y/R/B/O NT_017168AC000119888962413MFD267  7103.631 AC000119
S/G/Y/R/B/O NT_017168AC000119889786953AFM263YD97105.207104.861 AC000119
S/G/Y/R/B/O NT_017168AC002453890060013UT1257  7104.861 AC002453
S/G/Y/R/B/O NT_017168AC002453890418753AFM254XD57105.207104.861 AC002453
S/G/Y/R/B/O NT_017168AC002379890747273        
S/G/Y/R/B/O NT_017168AC003078891931223        
S/G/Y/R/B/O NT_017168AC005024893850763AFMA156TB17106.207105.391 AC005024
S/G/Y/R/B/O NT_017168AC067917894647491        
S/G/Y/R/B/O NT_017168AC097663894660803        
S/G/Y/R/B/O NT_017168AC002075895296123GATA26D09  7105.921AC067917, AC067917, AC084370
S/G/Y/R/B/O NT_017168AC002076895889893        
S/G/Y/R/B/O NT_017168AC006378897385533        
S/G/Y/R/B/O NT_017168AC003092898783383GATA137F12  7105.921 AC003092
S/G/Y/R/B/O NT_017168AC007094899496293        
S/G/Y/R/B/O NT_017168AC002074902001993COL1A2  7106.461 AB004317, AC002074
S/G/Y/R/B/O NT_017168AF004877902110243        
S/G/Y/R/B/O NT_017168AC002528902365733        
S/G/Y/R/B/O NT_017168AC096662903518943        
S/G/Y/R/B/O NT_017168AC069292903809923        
S/G/Y/R/B/O NT_017168AC104700905386163        
S/G/Y/R/B/O NT_017168AC069570906034751