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  Chromosome 7 - Genetic Maps - Single Contig
 

Chromosome 7 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_007834
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007834AC079252710293621        
S/G/Y/R/B/O NT_007834AC115107710314851        
S/G/Y/R/B/O NT_007834AC006014711088613IB1445  784.523 AC115108
S/G/Y/R/B/O NT_007834AC018720711867233        
S/G/Y/R/B/O NT_007834AC004491714815963AFMB299XG5787.60787.381 AC004491
S/G/Y/R/B/O NT_007834AC004491714899833AFMC019YG9787.60786.121 AC004491
S/G/Y/R/B/O NT_007834AC006025714971413        
S/G/Y/R/B/O NT_007834AC005102715312553UT533  786.121 AC005102
S/G/Y/R/B/O NT_007834AC005067716086663        
S/G/Y/R/B/O NT_007834AC006330716979143        
S/G/Y/R/B/O NT_007834AC005077717940133        
S/G/Y/R/B/O NT_007834AC006388720341923        
S/G/Y/R/B/O NT_007834AC005522721506693AFMA351YE1790.30789.881 AC005522
S/G/Y/R/B/O NT_007834AC007078722426383        
S/G/Y/R/B/O NT_007834AC004980722569133        
S/G/Y/R/B/O NT_007834AC006972724642073        
S/G/Y/R/B/O NT_007834AC007003726357443        
S/G/Y/R/B/O NT_007834AC114737726696313        
S/G/Y/R/B/O NT_007834AC007000727648583        
S/G/Y/R/B/O NT_007834AC098851729615183        
S/G/Y/R/B/O NT_007834AC073635730198643        
S/G/Y/R/B/O NT_007834AC004921730954913        
S/G/Y/R/B/O NT_007834AC006451732456233        
S/G/Y/R/B/O NT_007834AC090421733913893        
S/G/Y/R/B/O NT_007834AC004955734835463AFMA290XA5790.30790.701 AC004955
S/G/Y/R/B/O NT_007834AC073520735531413        
S/G/Y/R/B/O NT_007834AC004990736571723AFM295YG9790.30790.421 AC091528
S/G/Y/R/B/O NT_007834AC004990737859553AFMA128YE1790.30789.881 AC004990
S/G/Y/R/B/O NT_007834AC004808738202133AFMC014ZD9790.30789.881 AC004808
S/G/Y/R/B/O NT_007834AC073200739845733AFM286XF9790.90790.421 AC073200
S/G/Y/R/B/O NT_007834AC006043740812913        
S/G/Y/R/B/O NT_007834AC007361741738113        
S/G/Y/R/B/O NT_007834AC007237742386953GATA73D10  790.951 AC007237
S/G/Y/R/B/O NT_007834AC005246743860353AFM016ZG1792.20791.671 AC005246, AC023307, AC025831
S/G/Y/R/B/O NT_007834AC004547745535643AFM260YB5792.30791.671 AC004547
S/G/Y/R/B/O NT_007834AC008071745603753        
S/G/Y/R/B/O NT_007834AC073092746901133        
S/G/Y/R/B/O NT_007834AC006324746961463        
S/G/Y/R/B/O NT_007834AC006355748532563        
S/G/Y/R/B/O NT_007834AC074024749906673        
S/G/Y/R/B/O NT_007834AC004945750888083        
S/G/Y/R/B/O NT_007834AC091813752559803        
S/G/Y/R/B/O NT_007834AC092201753129383        
S/G/Y/R/B/O NT_007834AC073048753753123        
S/G/Y/R/B/O NT_007834AC079589755394983        
S/G/Y/R/B/O NT_007834AC004548755590043        
S/G/Y/R/B/O NT_007834AC004109756639313        
S/G/Y/R/B/O NT_007834AC004454757329323        
S/G/Y/R/B/O NT_007834AC004159758132463        
S/G/Y/R/B/O NT_007834AC080066759600843AFM203VB6793.60793.101 AC080066


  NT_007834 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007834AC003988759994703AFMA222WA5793.70793.101 AC003988
S/G/Y/R/B/O NT_007834AC004862760532033        
S/G/Y/R/B/O NT_007834AC092108762118143        
S/G/Y/R/B/O NT_007834AC073182762361633        
S/G/Y/R/B/O NT_007834AL355313763571071        
S/G/Y/R/B/O NT_007834AC073850763876183        
S/G/Y/R/B/O NT_007834AC093683765714643        
S/G/Y/R/B/O NT_007834AC004880765758643        
S/G/Y/R/B/O NT_007834AC004972766855863GATA21D08  793.631 AC004972
S/G/Y/R/B/O NT_007834AC004972767159453AFM277VD5794.40793.631 AC004972
S/G/Y/R/B/O NT_007834AC074089768073383        
S/G/Y/R/B/O NT_007834AC074214768445803        
S/G/Y/R/B/O NT_007834AC092444768858563        
S/G/Y/R/B/O NT_007834AC005008768910483        
S/G/Y/R/B/O NT_007834AC004541769806823        
S/G/Y/R/B/O NT_007834AC004866771817323PY5-19  793.631 AC004866, AC092334
S/G/Y/R/B/O NT_007834AC008163772073713        
S/G/Y/R/B/O NT_007834AC010091773424713        
S/G/Y/R/B/O NT_007834AC004960774832663PY5-18  794.871 AC004960
S/G/Y/R/B/O NT_007834AC004960775070933PY5-14  794.401 AC004960
S/G/Y/R/B/O NT_007834AC009493775427693        
S/G/Y/R/B/O NT_007834AC079254776290853        
S/G/Y/R/B/O NT_007834AC006145776548703MFD340  794.401 AC006145
S/G/Y/R/B/O NT_007834AC008283777806093        
S/G/Y/R/B/O NT_007834AC004989778376963        
S/G/Y/R/B/O NT_007834AC004892779225543        
S/G/Y/R/B/O NT_007834AC005159779886273        
S/G/Y/R/B/O NT_007834AC004970780683413        
S/G/Y/R/B/O NT_007834AC004894782180923        
S/G/Y/R/B/O NT_007834AC004006783824033        
S/G/Y/R/B/O NT_007834AC004082785016563        
S/G/Y/R/B/O NT_007834AC080093785994853        
S/G/Y/R/B/O NT_007834AC004886786368073        
S/G/Y/R/B/O NT_007834AC004903787799713        
S/G/Y/R/B/O NT_007834AC093461789138833GATA87D11  795.431 AC093461
S/G/Y/R/B/O NT_007834AC004027789340483        
S/G/Y/R/B/O NT_007834AC079799790652403        
S/G/Y/R/B/O NT_007834AC079987792340353AFMA043TB1798.40797.381 AC084267
S/G/Y/R/B/O NT_007834AC006204792406953        
S/G/Y/R/B/O NT_007834AC004954793850583        
S/G/Y/R/B/O NT_007834AC079113794715263        
S/G/Y/R/B/O NT_007834AC006322795659953        
S/G/Y/R/B/O NT_007834AC073221797454353        
S/G/Y/R/B/O NT_007834AC004848799064803GATA3F01  798.441 AC004848
S/G/Y/R/B/O NT_007834AC004451799957283GATA73F12  798.441 AC004451
S/G/Y/R/B/O NT_007834AC004028800464223        
S/G/Y/R/B/O NT_007834AC079351801586141        
S/G/Y/R/B/O NT_007834AC068632801591371        
S/G/Y/R/B/O NT_007834AC004907801759923GATA23H04  797.381AC079351, AC004907, AC079351
S/G/Y/R/B/O NT_007834AC004907802800663AFM051XB12798.50798.441 AC004907, AC080090


  NT_007834 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007834AC004907802849463AFMA113YG1798.60797.381 AC004907
S/G/Y/R/B/O NT_007834AC003984802919983        
S/G/Y/R/B/O NT_007834AC092022803615853        
S/G/Y/R/B/O NT_007834AC093716805297263        
S/G/Y/R/B/O NT_007834AC074183806047543        
S/G/Y/R/B/O NT_007834AC004957807998263AFM248TA5798.00797.381 AC004957
S/G/Y/R/B/O NT_007834AC006151808740263        
S/G/Y/R/B/O NT_007834AC090422810098323        
S/G/Y/R/B/O NT_007834AC073958810447093AFMA037YE5798.20797.381 AC073958
S/G/Y/R/B/O NT_007834AC074112811812353        
S/G/Y/R/B/O NT_007834AC099551813271333        
S/G/Y/R/B/O NT_007834AC092013813475003        
S/G/Y/R/B/O NT_007834AC096562814752563        
S/G/Y/R/B/O NT_007834AC084793816114803        
S/G/Y/R/B/O NT_007834AC004413817108403AFMA064WG1798.10797.381 AC004413
S/G/Y/R/B/O NT_007834AC004926817685963        
S/G/Y/R/B/O NT_007834AC006374819219523        
S/G/Y/R/B/O NT_007834AC079740820823783        
S/G/Y/R/B/O NT_007834AC007035821078043        
S/G/Y/R/B/O NT_007834AC073903822862013        
S/G/Y/R/B/O NT_007834AC004829824055193AFM234XC7798.30797.891 AC004829
S/G/Y/R/B/O NT_007834AC005009824961693        
S/G/Y/R/B/O NT_007834AC002081826958863AFMB072WB5798.60798.441 AC002081, AL357495
S/G/Y/R/B/O NT_007834AC000122827031543        
S/G/Y/R/B/O NT_007834AC004519827329333        
S/G/Y/R/B/O NT_007834AC004023828406223        
S/G/Y/R/B/O NT_007834AC005076829001233        
S/G/Y/R/B/O NT_007834AC073423830580693        
S/G/Y/R/B/O NT_007834 - UT5227  790.420  
S/G/Y/R/B/O NT_007834 - MFD50  795.431AC004417, AC004417