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Chromosome 7 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_007758
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007758AC005482636092243AFM199VH8779.60778.651 AC005482
S/G/Y/R/B/O NT_007758AC080073637295913        
S/G/Y/R/B/O NT_007758AC092648638216173AFM070YC1779.60778.651 AC092648
S/G/Y/R/B/O NT_007758AC092637639545473        
S/G/Y/R/B/O NT_007758AC006013640791903        
S/G/Y/R/B/O NT_007758AC093655642361873        
S/G/Y/R/B/O NT_007758AC073216643539083        
S/G/Y/R/B/O NT_007758AC025540644604983UT6741  778.651 AC025540, AC069284, AC069284, AC087371
S/G/Y/R/B/O NT_007758AC084438645159373GGAA22F05  778.651 AC069284, AC084438, AC087371
S/G/Y/R/B/O NT_007758AC084438645566773AFMB346VF9779.60778.651 AC069284, AC084438, AC087371
S/G/Y/R/B/O NT_007758AC004910646444133        
S/G/Y/R/B/O NT_007758AC004929647475273AFMB298XG9779.60778.651 AC004929
S/G/Y/R/B/O NT_007758AC079897648523433        
S/G/Y/R/B/O NT_007758AC006337648606083UT530  778.651 AC006337
S/G/Y/R/B/O NT_007758AC006337649914913AFMB286XD5779.60778.651 AC006337
S/G/Y/R/B/O NT_007758AC104688650296993        
S/G/Y/R/B/O NT_007758AC093693650747873        
S/G/Y/R/B/O NT_007758AC069305651206733        
S/G/Y/R/B/O NT_007758AC069280651989553AFM220YA3780.10779.241 AC069280
S/G/Y/R/B/O NT_007758AC092100653322613        
S/G/Y/R/B/O NT_007758AC004966654523603        
S/G/Y/R/B/O NT_007758AC006012656169523AFMA204WB1781.20780.421 AC006012
S/G/Y/R/B/O NT_007758AC006361657058423        
S/G/Y/R/B/O NT_007758AC006318659032013AFM238ZC9781.20780.421 AC006318
S/G/Y/R/B/O NT_007758AC006319659477013AFMB335WD9781.20780.421 AC006319
S/G/Y/R/B/O NT_007758AC006317660188183        
S/G/Y/R/B/O NT_007758AC093487661644963        
S/G/Y/R/B/O NT_007758AC073148661948993        
S/G/Y/R/B/O NT_007758AC004773663597463        
S/G/Y/R/B/O NT_007758AC093685664865413        
S/G/Y/R/B/O NT_007758AC004881664904563        
S/G/Y/R/B/O NT_007758AC004927666315943        
S/G/Y/R/B/O NT_007758AC093679667114993        
S/G/Y/R/B/O NT_007758AC073873667393843        
S/G/Y/R/B/O NT_007758AC092029669263763        
S/G/Y/R/B/O NT_007758AC073278669295083        
S/G/Y/R/B/O NT_007758AC004963671283153        
S/G/Y/R/B/O NT_007758AC079398672999423        
S/G/Y/R/B/O NT_007758AC004874673616233        
S/G/Y/R/B/O NT_007758AC091731674556103        
S/G/Y/R/B/O NT_007758AC092021675678633        
S/G/Y/R/B/O NT_007758AC073330676660923AFMC014WG5784.40783.991 AC073330
S/G/Y/R/B/O NT_007758AC006334678180033GTAT1A10  783.991 AC006334
S/G/Y/R/B/O NT_007758AC004905678187873        
S/G/Y/R/B/O NT_007758AC005011679884703UT5179  785.321 AC005011
S/G/Y/R/B/O NT_007758AC004845681188063        
S/G/Y/R/B/O NT_007758AC092785681884533        
S/G/Y/R/B/O NT_007758AC067941682853993AFMA106WB1784.40783.991 AC002527, AC067941
S/G/Y/R/B/O NT_007758AC067941683618363UT529  785.321 AC067941
S/G/Y/R/B/O NT_007758AC067941683940093AFM259ZC1784.90784.521 AC067941


  NT_007758 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007758AC092424684141753AFM289VE9784.90784.521 AC092424
S/G/Y/R/B/O NT_007758AC092536684893953        
S/G/Y/R/B/O NT_007758AC091738686201503        
S/G/Y/R/B/O NT_007758AC105447687500783        
S/G/Y/R/B/O NT_007758AC114816687820873        
S/G/Y/R/B/O NT_007758AC114731687939493        
S/G/Y/R/B/O NT_007758AC005236687990233        
S/G/Y/R/B/O NT_007758AC005488690196613IB1445  784.523 AC115108
S/G/Y/R/B/O NT_007758AC006995690701533        
S/G/Y/R/B/O NT_007758AC073841692408543        
S/G/Y/R/B/O NT_007758AC005049692962423        
S/G/Y/R/B/O NT_007758AC005074694029703        
S/G/Y/R/B/O NT_007758AC005089695673343AFMB018YF5784.40784.521 AC005089, AF156673
S/G/Y/R/B/O NT_007758AC073846696121933        
S/G/Y/R/B/O NT_007758AC093168697331973        
S/G/Y/R/B/O NT_007758AC099398698798863        
S/G/Y/R/B/O NT_007758AC005056700224103ELN  784.521 AC005056, U93037
S/G/Y/R/B/O NT_007758AC005057701232913UT623  783.991 AC016675
S/G/Y/R/B/O NT_007758AC005081701591143        
S/G/Y/R/B/O NT_007758AC005015704330183AFMB007WG5786.50785.321 AC005015
S/G/Y/R/B/O NT_007758AC004851704715903        
S/G/Y/R/B/O NT_007758AC005231705430173        
S/G/Y/R/B/O NT_007758AC083884706766283AFMA060XC9786.50786.121 AC004883
S/G/Y/R/B/O NT_007758AC004867708114023        
S/G/Y/R/B/O NT_007758AC004166709330063