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  Chromosome 7 - Genetic Maps - Single Contig
 

Chromosome 7 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_007933
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007933AC0049171076464253        
S/G/Y/R/B/O NT_007933AC0257281077566583        
S/G/Y/R/B/O NT_007933AC0023841078104123AFM199VB27119.807118.901 AC002384
S/G/Y/R/B/O NT_007933AC0050181078617213        
S/G/Y/R/B/O NT_007933AC0793961079690483        
S/G/Y/R/B/O NT_007933AC0063871080284073        
S/G/Y/R/B/O NT_007933AC0044921082598643AFMA126ZC17120.707119.811 AC004492
S/G/Y/R/B/O NT_007933AC0048551083305793        
S/G/Y/R/B/O NT_007933AC0023811085247323AFM172XA17120.707119.811 AC002381, AC079930
S/G/Y/R/B/O NT_007933AC0048391085775283        
S/G/Y/R/B/O NT_007933AC0789371086333053        
S/G/Y/R/B/O NT_007933AC0024671087015263AFMA305YE97120.707119.811 AC002467, AC079930
S/G/Y/R/B/O NT_007933AC0050461087928833        
S/G/Y/R/B/O NT_007933AC0788531090121193        
S/G/Y/R/B/O NT_007933AC0050481090531753AFMA297YF97121.507120.611 AC005048
S/G/Y/R/B/O NT_007933AC0056831091417373        
S/G/Y/R/B/O NT_007933AC0075671092162103        
S/G/Y/R/B/O NT_007933AC0050581094034233        
S/G/Y/R/B/O NT_007933AC0054871096055073UT899  7121.411 AC005487
S/G/Y/R/B/O NT_007933AC0024871097095693AFM357TE17121.507121.411 AC002487
S/G/Y/R/B/O NT_007933AC0024871097170463AFMA140YC97121.507121.411 AC002487
S/G/Y/R/B/O NT_007933AC0993381098208503        
S/G/Y/R/B/O NT_007933AC0732721098258253        
S/G/Y/R/B/O NT_007933AC0040141099785253MFD225  7121.412AC055852, AC004014, AC055852
S/G/Y/R/B/O NT_007933AC0917661100504543        
S/G/Y/R/B/O NT_007933AC0732481101139963        
S/G/Y/R/B/O NT_007933AC0936701102402903        
S/G/Y/R/B/O NT_007933AC0023861102422843        
S/G/Y/R/B/O NT_007933AC0741191103717483        
S/G/Y/R/B/O NT_007933AC0730711106086083GATA21H01  7121.411AC073103, AC073071, AC073103
S/G/Y/R/B/O NT_007933AC0731031106216701        
S/G/Y/R/B/O NT_007933AC0733871107514513GATA141H10  7121.411 AC067880, AC073387
S/G/Y/R/B/O NT_007933AC0731391107750013        
S/G/Y/R/B/O NT_007933AC1029511109016363        
S/G/Y/R/B/O NT_007933AC0041611110132323AFM248TC57122.307121.411 AC004161
S/G/Y/R/B/O NT_007933AC0798931110323343        
S/G/Y/R/B/O NT_007933AC0731141110530033        
S/G/Y/R/B/O NT_007933AC0920631112284483        
S/G/Y/R/B/O NT_007933AC0030811113488033AFMA124XB97123.407122.481 AC003081
S/G/Y/R/B/O NT_007933AC0063391113858723        
S/G/Y/R/B/O NT_007933AC0030881114071343        
S/G/Y/R/B/O NT_007933AC0921671114861383        
S/G/Y/R/B/O NT_007933AC0794531115880683        
S/G/Y/R/B/O NT_007933AC0733261115889943        
S/G/Y/R/B/O NT_007933AC1068661117494233        
S/G/Y/R/B/O NT_007933AC0739801117527553        
S/G/Y/R/B/O NT_007933AC0051611118924213UT6262  7121.411 AC005161
S/G/Y/R/B/O NT_007933AC0063921119478363        
S/G/Y/R/B/O NT_007933AC0069971120650173        
S/G/Y/R/B/O NT_007933AC0041421120901023        


  NT_007933 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007933AC0060021122560283        
S/G/Y/R/B/O NT_007933AC0069931123117453        
S/G/Y/R/B/O NT_007933AC0039891123319733        
S/G/Y/R/B/O NT_007933AC0051661124498763        
S/G/Y/R/B/O NT_007933AC0926131125579213        
S/G/Y/R/B/O NT_007933AC0050471125921493        
S/G/Y/R/B/O NT_007933AC0030771127441653        
S/G/Y/R/B/O NT_007933AC0030801128423523        
S/G/Y/R/B/O NT_007933AC0040011130717883AFM242YE37123.907123.011AC010277, AC004001, AC010277
S/G/Y/R/B/O NT_007933AC0041111131168503        
S/G/Y/R/B/O NT_007933AC0875391132228223        
S/G/Y/R/B/O NT_007933AC0041121134074253MFD123  7123.011 AC004112
S/G/Y/R/B/O NT_007933AC0024591134131323        
S/G/Y/R/B/O NT_007933AC0797411134388013        
S/G/Y/R/B/O NT_007933AC0051921134735233        
S/G/Y/R/B/O NT_007933AC0024631136001223        
S/G/Y/R/B/O NT_007933AC0796211137356063        
S/G/Y/R/B/O NT_007933AC0731831138305593        
S/G/Y/R/B/O NT_007933AC0184641138624033        
S/G/Y/R/B/O NT_007933AC0743691140180653        
S/G/Y/R/B/O NT_007933AC0733461140789843        
S/G/Y/R/B/O NT_007933AC0732801142594353        
S/G/Y/R/B/O NT_007933AC0731371142917333        
S/G/Y/R/B/O NT_007933AC0733481144583743        
S/G/Y/R/B/O NT_007933AC0919981146121713        
S/G/Y/R/B/O NT_007933AC0023851146191293        
S/G/Y/R/B/O NT_007933AC0275691148192191        
S/G/Y/R/B/O NT_007933AC0320171148257011        
S/G/Y/R/B/O NT_007933AC0797711148329403        
S/G/Y/R/B/O NT_007933AC0024661148442293        
S/G/Y/R/B/O NT_007933AC0686101149203873        
S/G/Y/R/B/O NT_007933AC0797431149515533        
S/G/Y/R/B/O NT_007933AC0024611149775793        
S/G/Y/R/B/O NT_007933AC0920621151746523        
S/G/Y/R/B/O NT_007933AC0739011151868523        
S/G/Y/R/B/O NT_007933AC0925901153555063        
S/G/Y/R/B/O NT_007933AC0996821154813423        
S/G/Y/R/B/O NT_007933AC0937141154833363        
S/G/Y/R/B/O NT_007933AC0965511156253063AFMB343XC17125.007124.081 AC096551
S/G/Y/R/B/O NT_007933AC0731411157717413        
S/G/Y/R/B/O NT_007933AC0731301159702083AFMA045XB17125.307124.081 AC015471, AC073130
S/G/Y/R/B/O NT_007933AC0731301160618623AFM098XG97125.307124.081 AC073130
S/G/Y/R/B/O NT_007933AC0740211161241123        
S/G/Y/R/B/O NT_007933AC0020661162397463AFM242YC37125.107124.081 AJ133269
S/G/Y/R/B/O NT_007933AC0061591163022473        
S/G/Y/R/B/O NT_007933AC0020801163941723        
S/G/Y/R/B/O NT_007933AC0044161165751523AFM197XF107125.107124.081 AC004416
S/G/Y/R/B/O NT_007933AC0025431165978503        
S/G/Y/R/B/O NT_007933AC1068731167477973        
S/G/Y/R/B/O NT_007933AC0025421168453933        


  NT_007933 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007933AC0039871170321343        
S/G/Y/R/B/O NT_007933AC0063261170689343        
S/G/Y/R/B/O NT_007933AC0024651171779043AFM200WE17125.207124.081 AC002465
S/G/Y/R/B/O NT_007933AC0030451172428423        
S/G/Y/R/B/O NT_007933AC0001111173065943AFM303VH97125.207124.081 AC000111
S/G/Y/R/B/O NT_007933AC0000611174170903        
S/G/Y/R/B/O NT_007933AC0042401174994023        
S/G/Y/R/B/O NT_007933AC0075681175851483        
S/G/Y/R/B/O NT_007933AC0030841177222253        
S/G/Y/R/B/O NT_007933AC0045361178882443        
S/G/Y/R/B/O NT_007933AC0063891179326043        
S/G/Y/R/B/O NT_007933AC0078741180402893        
S/G/Y/R/B/O NT_007933AC0040291180442783        
S/G/Y/R/B/O NT_007933AC0069261181978133        
S/G/Y/R/B/O NT_007933AC0025291182845193        
S/G/Y/R/B/O NT_007933AC0730421184210743        
S/G/Y/R/B/O NT_007933AC0743901186029123        
S/G/Y/R/B/O NT_007933AC0920981188352493AFM263WG97126.507125.151 AC092098
S/G/Y/R/B/O NT_007933AC0797911189866343GATA44F09  7125.151 AC079791
S/G/Y/R/B/O NT_007933AC0242591190112563        
S/G/Y/R/B/O NT_007933AC0938891191865593        
S/G/Y/R/B/O NT_007933AC0913201192848593        
S/G/Y/R/B/O NT_007933AC0996481194625873        
S/G/Y/R/B/O NT_007933AC0730901195305133        
S/G/Y/R/B/O NT_007933AC0788481196450703        
S/G/Y/R/B/O NT_007933AC0049151197796483        
S/G/Y/R/B/O NT_007933AC0048721199024343        
S/G/Y/R/B/O NT_007933AC0049461199756053        
S/G/Y/R/B/O NT_007933AC0920201200825073        
S/G/Y/R/B/O NT_007933AC0063321201227303AFMB294YD17126.407125.151 AC006332
S/G/Y/R/B/O NT_007933AC0070261202373883        
S/G/Y/R/B/O NT_007933AC0738841203579973        
S/G/Y/R/B/O NT_007933AC0048881204240213        
S/G/Y/R/B/O NT_007933AC0044561205812873        
S/G/Y/R/B/O NT_007933AC0045371207245233        
S/G/Y/R/B/O NT_007933AC0069761209006143AFM224ZF107126.307125.151 AC006976
S/G/Y/R/B/O NT_007933AC0731451209344873        
S/G/Y/R/B/O NT_007933AC0063641211322083AFM042XH107127.207125.951 AC006364
S/G/Y/R/B/O NT_007933AC0794011212019243        
S/G/Y/R/B/O NT_007933AC0740851212220973AFM240ZH107128.407126.751 AC074085
S/G/Y/R/B/O NT_007933AC0048751214107733UT5085  7126.751 AC004875
S/G/Y/R/B/O NT_007933AC0048751214594853AFM317YC57129.407127.821 AC004875
S/G/Y/R/B/O NT_007933AC0069791214901583        
S/G/Y/R/B/O NT_007933AC0063531215935213        
S/G/Y/R/B/O NT_007933AC0730951217514113        
S/G/Y/R/B/O NT_007933AC0060201218184873        
S/G/Y/R/B/O NT_007933AC0159831219710983        
S/G/Y/R/B/O NT_007933AC0045941221483743        
S/G/Y/R/B/O NT_007933AC0060091223347843AFMB292YB57129.407127.821 AC006009
S/G/Y/R/B/O NT_007933AC0914381223937903        


  NT_007933 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007933AC0064631224251773        
S/G/Y/R/B/O NT_007933AC0049861225812693AFM329YA97129.407127.821 AC004986
S/G/Y/R/B/O NT_007933AC0048381227781603GGAA9C07  7127.821 AC004838
S/G/Y/R/B/O NT_007933AC0733111228138433        
S/G/Y/R/B/O NT_007933AC0913191229187813        
S/G/Y/R/B/O NT_007933AC0730541229365293AFM150YG77129.307127.821 AC073054
S/G/Y/R/B/O NT_007933AC0063541230833963        
S/G/Y/R/B/O NT_007933AC0733231232389383        
S/G/Y/R/B/O NT_007933AC0063331233928373AFMA203XA97130.107128.411 AC006333
S/G/Y/R/B/O NT_007933AC0063331234563793GGAA6D03  7128.411 AC006333
S/G/Y/R/B/O NT_007933AC0063331235470123AFM107YB67130.007128.411 AC006333, AC027585
S/G/Y/R/B/O NT_007933AC0060291236648373UT6241  7126.751 AC006029
S/G/Y/R/B/O NT_007933AC0069641237036323        
S/G/Y/R/B/O NT_007933AC0046901238045593AFMC026WB57130.207128.411 AC004690
S/G/Y/R/B/O NT_007933AC0060101238584883        
S/G/Y/R/B/O NT_007933AC0061481240247573AFM078ZE17130.207128.411 AC006148
S/G/Y/R/B/O NT_007933AC0921541240938293        
S/G/Y/R/B/O NT_007933AC0049301241031073        
S/G/Y/R/B/O NT_007933AC0055211242195583        
S/G/Y/R/B/O NT_007933AC0732031243558533        
S/G/Y/R/B/O NT_007933AC0049251245040803        
S/G/Y/R/B/O NT_007933AC1107911246570533        
S/G/Y/R/B/O NT_007933AC0966651247203473        
S/G/Y/R/B/O NT_007933AC0733221248772373AFM324ZG57130.807128.991 AC073322
S/G/Y/R/B/O NT_007933AC0191551248813953        
S/G/Y/R/B/O NT_007933AC0924671250573253        
S/G/Y/R/B/O NT_007933AC0100991250657063AFM199ZH47130.807128.991 AC010099
S/G/Y/R/B/O NT_007933AC0734861252121553        
S/G/Y/R/B/O NT_007933AC0044031253407863        
S/G/Y/R/B/O NT_007933AC0044021253801043        
S/G/Y/R/B/O NT_007933AC0043911254101123        
S/G/Y/R/B/O NT_007933AC0041071254435513        
S/G/Y/R/B/O NT_007933AC0043981254756503        
S/G/Y/R/B/O NT_007933AC0043971255078933        
S/G/Y/R/B/O NT_007933AC0040951255409313        
S/G/Y/R/B/O NT_007933AC0040941255745443        
S/G/Y/R/B/O NT_007933AC0040911256078293        
S/G/Y/R/B/O NT_007933AC0040921256412093        
S/G/Y/R/B/O NT_007933AC0040781256802073        
S/G/Y/R/B/O NT_007933AC0052761257200733        
S/G/Y/R/B/O NT_007933AC0039751257335693        
S/G/Y/R/B/O NT_007933AC0039801257740293        
S/G/Y/R/B/O NT_007933AC0039681258138593        
S/G/Y/R/B/O NT_007933AC0039601258513643        
S/G/Y/R/B/O NT_007933AC0039611258958733AFM323WD57131.707129.581 AC003961, AC093603
S/G/Y/R/B/O NT_007933AC0030501259216503        
S/G/Y/R/B/O NT_007933AC0025081259609523        
S/G/Y/R/B/O NT_007933AC0025071259817463        
S/G/Y/R/B/O NT_007933AC0025001260175763        
S/G/Y/R/B/O NT_007933AC0024991260517523        


  NT_007933 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007933AC0024981260907653        
S/G/Y/R/B/O NT_007933AC0003711261235963        
S/G/Y/R/B/O NT_007933AC0056891261786663UT528  7126.751AC000372, AC000368, AC000372, AC005503, AC005689, AC020996
S/G/Y/R/B/O NT_007933AC0003721261924363        
S/G/Y/R/B/O NT_007933AC0003701262141593        
S/G/Y/R/B/O NT_007933AC0003691262606583AFMA065ZG97129.407127.821 AC000369, AC005583
S/G/Y/R/B/O NT_007933AC0003741262930773        
S/G/Y/R/B/O NT_007933AC0020571263275943        
S/G/Y/R/B/O NT_007933AC0024961263650803        
S/G/Y/R/B/O NT_007933AC0020831263972243        
S/G/Y/R/B/O NT_007933AC0020841264547043GATA28G04  7129.581 AC002084
S/G/Y/R/B/O NT_007933AC0021141264594283        
S/G/Y/R/B/O NT_007933AC0024971265007393        
S/G/Y/R/B/O NT_007933AC0025331265469643AFMA125WH17130.207129.581 AC002533
S/G/Y/R/B/O NT_007933AC0003651266065833        
S/G/Y/R/B/O NT_007933AC0021131266501913        
S/G/Y/R/B/O NT_007933AC0003671266880393        
S/G/Y/R/B/O NT_007933AC0003731267189013        
S/G/Y/R/B/O NT_007933AC0003661267537883        
S/G/Y/R/B/O NT_007933AC0003621267926893        
S/G/Y/R/B/O NT_007933AC0003611268454063AFM309YF17132.607130.761 AC000361
S/G/Y/R/B/O NT_007933AC0003641268611843        
S/G/Y/R/B/O NT_007933AC0020631268900283        
S/G/Y/R/B/O NT_007933AC0003631268905183        
S/G/Y/R/B/O NT_007933AC0003541269284213        
S/G/Y/R/B/O NT_007933AC0003561269575653        
S/G/Y/R/B/O NT_007933AC0020481269882703        
S/G/Y/R/B/O NT_007933AC0003551269883843        
S/G/Y/R/B/O NT_007933AC0000991270304043        
S/G/Y/R/B/O NT_007933AC0024241270624523        
S/G/Y/R/B/O NT_007933AC0024941270666193        
S/G/Y/R/B/O NT_007933AC0024951270683993        
S/G/Y/R/B/O NT_007933AC0001091270711423        
S/G/Y/R/B/O NT_007933AC0001101271108393        
S/G/Y/R/B/O NT_007933AC0001231271462163        
S/G/Y/R/B/O NT_007933AC0001271271954223AFM218XF107132.607130.171 AC000127
S/G/Y/R/B/O NT_007933AC0001251272172823        
S/G/Y/R/B/O NT_007933AC0001261272593583        
S/G/Y/R/B/O NT_007933AC0001241272936193        
S/G/Y/R/B/O NT_007933AC0003581273291803        
S/G/Y/R/B/O NT_007933AC0003571273640893        
S/G/Y/R/B/O NT_007933AC0739341274412223AFM206XC17132.607130.171 AC013686
S/G/Y/R/B/O NT_007933AC0091811275318383        
S/G/Y/R/B/O NT_007933AC0065291276800393AFMB340XH17132.607130.761 AC006529
S/G/Y/R/B/O NT_007933AC0065291277827463AFM199XH127132.607130.761AC008039, AC006529, AC008039
S/G/Y/R/B/O NT_007933AC0080391279178673AFMA345WC97132.607130.761AC018662, AC018662
S/G/Y/R/B/O NT_007933AC0080391279382683UT7704  7130.761 AC008039
S/G/Y/R/B/O NT_007933AC0186621279663183        
S/G/Y/R/B/O NT_007933AC0186351280490043        
S/G/Y/R/B/O NT_007933AC0106551281924123        


  NT_007933 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007933AC0901141283025813        
S/G/Y/R/B/O NT_007933AC1080101283923033        
S/G/Y/R/B/O NT_007933AC0186381284204933        
S/G/Y/R/B/O NT_007933AC0249521285953683        
S/G/Y/R/B/O NT_007933AC0255941287051913        
S/G/Y/R/B/O NT_007933AC0186391288182683        
S/G/Y/R/B/O NT_007933AC0110051289477613        
S/G/Y/R/B/O NT_007933AC0838661290983483        
S/G/Y/R/B/O NT_007933AC0931491291283313        
S/G/Y/R/B/O NT_007933AC0092441291739093        
S/G/Y/R/B/O NT_007933AC0788461293688233AFM249XF97136.407134.551 AC016695, AC078846
S/G/Y/R/B/O NT_007933AC0848641295733943        
S/G/Y/R/B/O NT_007933AC0848651296917663        
S/G/Y/R/B/O NT_007933AC0733201298076533        
S/G/Y/R/B/O NT_007933AC0870711299187203        
S/G/Y/R/B/O NT_007933AC0240851300744683AFMA051ZE97136.407134.551 AC024085, AC074012
S/G/Y/R/B/O NT_007933AC0240851301300983AFMC024WE97136.407134.551 AC024085, AC074012
S/G/Y/R/B/O NT_007933AC0079381301575223        
S/G/Y/R/B/O NT_007933AC0905201303180623        
S/G/Y/R/B/O NT_007933AC0092741303354763        
S/G/Y/R/B/O NT_007933AC0241611304848511        
S/G/Y/R/B/O NT_007933AC0692661304983561        
S/G/Y/R/B/O NT_007933AC0693971305034521        
S/G/Y/R/B/O NT_007933AC0936651305085481        
S/G/Y/R/B/O NT_007933 - AFM323YG57123.407123.011AC017003, AC011144, AC017003
S/G/Y/R/B/O NT_007933 - AFMA062ZD97123.907123.011AC002089, AC002089
S/G/Y/R/B/O NT_007933 - GATA67A05  7129.580 AC093676