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Chromosome 7 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_029998 NT_007968 NT_033967 NT_033174 NT_033965 NT_007819 NT_033177 NT_023530
NT_030008 NT_033968 NT_023629 NT_028235 NT_030001 NT_033184 NT_033969 NT_007758
NT_007834 NT_017168 NT_033966 NT_033176 NT_033964 NT_007930 NT_029999 NT_033180
NT_007912 NT_023632 NT_007933 NT_030012 NT_023649 NT_007688 NT_027067 NT_033179
NT_033181 NT_007914 NT_033182 NT_033175 NT_007666 NT_007905 NT_007741 NT_028233


  NT_033964
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033964AC002451949877093        
S/G/Y/R/B/O NT_033964AC022261951448083        
S/G/Y/R/B/O NT_033964AC079350952912961        
S/G/Y/R/B/O NT_033964AC024172952952831        
S/G/Y/R/B/O NT_033964AC091779953007903        
S/G/Y/R/B/O NT_033964AC002452954452193AFM248VD97109.007108.591AC024172, AC002452, AC024172
S/G/Y/R/B/O NT_033964AC002540955880403ATA19D05  7109.121 AC002540
S/G/Y/R/B/O NT_033964AC002450956097833        
S/G/Y/R/B/O NT_033964AC096775956493623        
S/G/Y/R/B/O NT_033964AC084368957468143        
S/G/Y/R/B/O NT_033964AC004458958048213UT900  7109.121 AC004458
S/G/Y/R/B/O NT_033964AC004458958876543GATA5D08  7109.121 AC004458
S/G/Y/R/B/O NT_033964AC093644959389153        
S/G/Y/R/B/O NT_033964AC092031959417133        
S/G/Y/R/B/O NT_033964AC073230961632983AFM036XG57109.507109.121 AC073230
S/G/Y/R/B/O NT_033964AC073230962158833AFM088YE97109.007109.121 AC018400, AC073230
S/G/Y/R/B/O NT_033964AC092595963260013AFM151XF107109.507109.121 AC018400, AC069289, AC092595
S/G/Y/R/B/O NT_033964AC004774963566053UT1341  7108.591 AC004774, AC018400, AC069289
S/G/Y/R/B/O NT_033964AC004774963827733GATA21C11  7109.121 AC004774, AC069289
S/G/Y/R/B/O NT_033964AC073421965152263        
S/G/Y/R/B/O NT_033964AC073900966116413        
S/G/Y/R/B/O NT_033964AC004745966963763        
S/G/Y/R/B/O NT_033964AC007316967933133        
S/G/Y/R/B/O NT_033964AC007360968995053        
S/G/Y/R/B/O NT_033964AC003085969801633        
S/G/Y/R/B/O NT_033964AC007875971488173UT901  7109.661 AC007875, AC040907
S/G/Y/R/B/O NT_033964AC007875971550083AFM248TE57110.007109.661 AC007875, AC040907
S/G/Y/R/B/O NT_033964AC004140971583923        
S/G/Y/R/B/O NT_033964AC005326972331103        
S/G/Y/R/B/O NT_033964AC079781973550403        
S/G/Y/R/B/O NT_033964AC004967974944843UT7164  7109.661 AC004967
S/G/Y/R/B/O NT_033964AC073101975404373        
S/G/Y/R/B/O NT_033964AC091654976369363        
S/G/Y/R/B/O NT_033964AC093169977514433        
S/G/Y/R/B/O NT_033964AC004841977612833        
S/G/Y/R/B/O NT_033964AC093799978913563        
S/G/Y/R/B/O NT_033964AC074121979266083        
S/G/Y/R/B/O NT_033964AC092688980909873        
S/G/Y/R/B/O NT_033964AC095044981422363        
S/G/Y/R/B/O NT_033964AC004991983774153AFM249ZA57111.607111.261 AC004991
S/G/Y/R/B/O NT_033964AC004893983852723        
S/G/Y/R/B/O NT_033964AC114500984888103        
S/G/Y/R/B/O NT_033964AC073468985208463        
S/G/Y/R/B/O NT_033964AC112711986572813        
S/G/Y/R/B/O NT_033964AC005163986896163        
S/G/Y/R/B/O NT_033964AC004834986965773        
S/G/Y/R/B/O NT_033964AC004922987758933        
S/G/Y/R/B/O NT_033964AC090113988562523        
S/G/Y/R/B/O NT_033964AC073063988608393        
S/G/Y/R/B/O NT_033964AC005020990975183AFM240VH47112.407112.321 AC005020, NG_000004


  NT_033964 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_033964AC069294991220833        
S/G/Y/R/B/O NT_033964AC011904992456613        
S/G/Y/R/B/O NT_033964AC025605993596401        
S/G/Y/R/B/O NT_033964 - UT5800  7109.121AC002429, AC002429
S/G/Y/R/B/O NT_033964 - UT997  7109.120AC005250, AC005250