Chromosome 3 - YAC Map - Single Contig

Chromosome 3 - YAC Map - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_005927	NT_029265	NT_028123	NT_006044	NT_022517	NT_005507	NT_022516	NT_005564
NT_005762	NT_005646	NT_028139	NT_033044	NT_005502	NT_022539	NT_022464	NT_005580
NT_033049	NT_005498	NT_006036	NT_005825	NT_029949	NT_005991	NT_005585	NT_022567
NT_028129	NT_005990	NT_030623	NT_022439	NT_006014	NT_033032	NT_005986	NT_033015
NT_033038	NT_022552	NT_005787	NT_033040	NT_022481	NT_005607	NT_033026	NT_005999
NT_005531	NT_022473	NT_022423	NT_005510	NT_022510	NT_022665	NT_028127	NT_022400
NT_005530	NT_029258	NT_022442	NT_005769	NT_005526	NT_022540	NT_022717	NT_005644
NT_022446	NT_005583	NT_033034	NT_005882	NT_033036	NT_022419	NT_006031	NT_022551
NT_022459	NT_033029	NT_022713	NT_022460	NT_033011	NT_022554	NT_022720	NT_005684
NT_005663	NT_033018	NT_022420	NT_033043	NT_022642	NT_005791	NT_022452	NT_022435
NT_033028	NT_022497	NT_022625	NT_005568	NT_022401	NT_033031	NT_026983	NT_022475
NT_033037	NT_022451	NT_005509	NT_005527	NT_033050	NT_030634	NT_033041	NT_005863
NT_022454	NT_022607	NT_022453	NT_025670	NT_030622	NT_033045	NT_022728	NT_031768
NT_019350	NT_022434	NT_029256	NT_022405	NT_022569	NT_006042	NT_022484	NT_005795
NT_015150	NT_022445	NT_030625	NT_005532	NT_029269	NT_022455	NT_029931	NT_033022
NT_029257	NT_005513	NT_005994	NT_030635	NT_022411	NT_005824	NT_033021	NT_005543
NT_005588	NT_006029	NT_022513	NT_005523	NT_033014	NT_006025	NT_022404	NT_005823
NT_033019	NT_022393	NT_025663	NT_005567	NT_030630	NT_005969	NT_033051	NT_025664
NT_005655	NT_022503	NT_022632	NT_033024	NT_022416	NT_022432	NT_033020	NT_033035
NT_033042	NT_005832	NT_022502	NT_005772	NT_019358	NT_005591	NT_005775	NT_022616
NT_005540	NT_029939	NT_005616	NT_005539	NT_022555	NT_005849	NT_005657	NT_005678
NT_005846	NT_005612	NT_033030	NT_022463	NT_022594	NT_022449	NT_022421	NT_005744
NT_022565	NT_022518	NT_005638	NT_022397	NT_022700	NT_022422	NT_025667	NT_033052
NT_022472	NT_033033	NT_022526	NT_022674	NT_022458	NT_022509	NT_005635	NT_033053
NT_005950	NT_022396	NT_005952	NT_022406	NT_022676	NT_029253	NT_030638	NT_005910
NT_022549	NT_033009	NT_005911	NT_005962	NT_031766	NT_005883	NT_005501	NT_005571
NT_033017	NT_033013	NT_029928	NT_033010	NT_005834	NT_005535	NT_033012	NT_033016
NT_022508

NT_005543

Links	Contig	Accession	Chr Start	Phs	STS Marker	YAC Chr	WI YAC	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_005543	AC025571	129796931	3
S/G/Y/R/B/O	NT_005543	AC084039	129944749	1
S/G/Y/R/B/O	NT_005543	AC074128	130054649	2	CHLC.ATC3A08	5	154.00	1		AC074128
S/G/Y/R/B/O	NT_005543	AC026342	130153682	1	WI-8515	3	498.00	1		AC026342, AC092983
S/G/Y/R/B/O	NT_005543	AC026342	130169205	1	WI-8456	3	497.00	1		AC026342, AC092983
S/G/Y/R/B/O	NT_005543	AC022336	130304116	3	WI-7038	3	502.00	1	AC013494, AC055741,	AC013494, AC022336, AC055741
S/G/Y/R/B/O	NT_005543	AC013494	130358799	1
S/G/Y/R/B/O	NT_005543	AC055741	130417697	1	CHLC.GATA112A02	3	495.00	1	AC013494, AC026603, AC092961, AC112133,	AC013494, AC026603, AC055741, AC080008, AC092961, AC112133
S/G/Y/R/B/O	NT_005543	AC055741	130417786	1	CHLC.GATA4G01.125	3	496.00	1	AC026603, AC092961,	AC026603, AC055741, AC092961
S/G/Y/R/B/O	NT_005543	AC073357	130462698	1
S/G/Y/R/B/O	NT_005543	AC023593	130649263	3	IB2461	3	507.00	1		AC012406, AC023593
S/G/Y/R/B/O	NT_005543	AC023593	130675433	3	WI-2049	3	508.00	1		AC012406, AC023593
S/G/Y/R/B/O	NT_005543	AC084035	130716144	1	WI-7884	3	509.00	1	AC023593,	AC012406, AC023593, AC084035
S/G/Y/R/B/O	NT_005543	AC023025	130754945	1
S/G/Y/R/B/O	NT_005543	AC080133	130816628	1
S/G/Y/R/B/O	NT_005543	AC112482	130957296	1
S/G/Y/R/B/O	NT_005543	AC023165	131046016	1
S/G/Y/R/B/O	NT_005543	AC016968	131149943	3	D3S3606	3	510.00	1	AC084035,	AC016968, AC084035
S/G/Y/R/B/O	NT_005543	AC020634	131231865	3	D3S3552	3	487.00	1	AC023165, AC074128, AC084039,	AC023165, AC074128, AC084039
S/G/Y/R/B/O	NT_005543	AC078808	132006203	1	D3S3519	3	491.00	1		AC078808
S/G/Y/R/B/O	NT_005543	AC112133	131429288	1
S/G/Y/R/B/O	NT_005543	AC092961	131437851	1
S/G/Y/R/B/O	NT_005543	AC026603	131453459	1
S/G/Y/R/B/O	NT_005543	AC016530	131507278	1
S/G/Y/R/B/O	NT_005543	AC069233	131568666	1	D3S1269	3	494.00	1	AC016530,	AC016530, AC069233
S/G/Y/R/B/O	NT_005543	AC069233	131595566	1	D3S3646	3	493.00	1	AC016530,	AC016530, AC069233
S/G/Y/R/B/O	NT_005543	AC112129	131702984	1
S/G/Y/R/B/O	NT_005543	AC016307	131710124	1
S/G/Y/R/B/O	NT_005543	AC078866	132091336	1	WI-3970	3	492.00	1	AC068227,	AC068227, AC078866
S/G/Y/R/B/O	NT_005543	AC068227	131822762	1
S/G/Y/R/B/O	NT_005543	AC068739	132158679	1	WI-9886	3	489.00	2	AC026957, AC092903,	AC026957, AC068739, AC092903
S/G/Y/R/B/O	NT_005543	AC068739	132228691	1	D3S3558	3	490.00	1		AC068739
S/G/Y/R/B/O	NT_005543		-		D3S3573	3	499.00	1	AC055752, AC069571, AF389851,	AC055752, AC069571, AF389851
S/G/Y/R/B/O	NT_005543		-		D3S3569	3	500.00	1	AC055752,	AC055752, AL357119
S/G/Y/R/B/O	NT_005543		-		D3S3636	3	501.00	2	AC026618, AC067998, AC092893, AC108688,	AC019289, AC026618, AC032043, AC067998, AC092893, AC108688, AL357119
S/G/Y/R/B/O	NT_005543		-		WI-9328	3	503.00	2	AC026618, AC055752, AC067998, AC092893, AC108688,	AC019289, AC026618, AC032043, AC055752, AC067998, AC092893, AC108688, AL357119
S/G/Y/R/B/O	NT_005543		-		WI-4418	3	504.00	2	AC026618, AC055752, AC067998, AC092893, AC108688,	AC019289, AC026618, AC032043, AC055752, AC067998, AC092893, AC108688, AL357119
S/G/Y/R/B/O	NT_005543		-		AFM190XB8	3	505.00	1	AC026618, AC080096, AC108688,	AC026618, AC032043, AC080096, AC108688
S/G/Y/R/B/O	NT_005543		-		D3S1551	3	506.00	1	AC055752, AC069571,	AC055752, AC069571