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  Chromosome 3 - YAC Map - Single Contig
 

Chromosome 3 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005787
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005787AC068753550279971      
S/G/Y/R/B/O NT_005787AC092057550786873D3S36663215.001AC068753, AC068753
S/G/Y/R/B/O NT_005787AC092057551220973D3S15823217.001AC068753, AC068753, AC092057
S/G/Y/R/B/O NT_005787AC092057551423973D3S36723214.001AC068753, AC068753, AC092057
S/G/Y/R/B/O NT_005787AC079032552273551      
S/G/Y/R/B/O NT_005787AC109584552782731      
S/G/Y/R/B/O NT_005787AC092797553814473D3S36603216.001AC079032, AC079032
S/G/Y/R/B/O NT_005787AC092797554168043D3S16133218.001 AC092797
S/G/Y/R/B/O NT_005787AC104298554845323      
S/G/Y/R/B/O NT_005787AC092059555941141      
S/G/Y/R/B/O NT_005787AC016306557097731      
S/G/Y/R/B/O NT_005787AC027002557214411      
S/G/Y/R/B/O NT_005787AC016323557266691      
S/G/Y/R/B/O NT_005787AC068773558466041      
S/G/Y/R/B/O NT_005787AC107298559282681D3S37193219.001AC016323, AC068773, AC016323, AC068773, AC107298
S/G/Y/R/B/O NT_005787AC011106558872231      
S/G/Y/R/B/O NT_005787AC026326560197721WI-66583221.001AC011106, AC068773, AC078978, AC107298, AC011106, AC026326, AC068773, AC078978, AC107298
S/G/Y/R/B/O NT_005787AC078978560240091      
S/G/Y/R/B/O NT_005787AC025572561223903D3S16063220.001AC026326, AC078978, AC026326, AC078978, AC097014
S/G/Y/R/B/O NT_005787AC025572561710293WI-56593223.001AC078978, AC078978
S/G/Y/R/B/O NT_005787AC025572561884113CHLC.ATA10D013222.001AC078978, AC025572, AC078978, AC097014
S/G/Y/R/B/O NT_005787AC025572562250823AFMA338XC53224.001 AC097014
S/G/Y/R/B/O NT_005787AC025572562863123WI-26393225.001 AC025572
S/G/Y/R/B/O NT_005787AC079624573059211WI-87183240.001 AC079624
S/G/Y/R/B/O NT_005787AC069254563160861      
S/G/Y/R/B/O NT_005787AC093928564693131D3S36163236.001 AC093928
S/G/Y/R/B/O NT_005787AC067759563342481      
S/G/Y/R/B/O NT_005787AC069438563876351      
S/G/Y/R/B/O NT_005787AC092418565224361      
S/G/Y/R/B/O NT_005787AC108040567474841D3S35323237.001AC092418, AC092418, AC108040
S/G/Y/R/B/O NT_005787AC114480566338521      
S/G/Y/R/B/O NT_005787AC099558566982251      
S/G/Y/R/B/O NT_005787AC099777569039761      
S/G/Y/R/B/O NT_005787AC114399574224411D3S12953238.001AC069254, AC069254
S/G/Y/R/B/O NT_005787AC110008571086631      
S/G/Y/R/B/O NT_005787AC098479572437343CHLC.GGAA13D093239.001AC079624, AC110008, AC079624, AC098479, AC110008
S/G/Y/R/B/O NT_005787AC104302574552323      
S/G/Y/R/B/O NT_005787AC105748576893443AFM067XB73228.001 AC105748
S/G/Y/R/B/O NT_005787AC105748577431193CHLC.GATA87B023226.001AC023558, AC023558, AC105748
S/G/Y/R/B/O NT_005787AC023558577934941      
S/G/Y/R/B/O NT_005787AC099775578941113WI-55313227.001AC023558, AC105753, AC023558, AC099775, AC105753
S/G/Y/R/B/O NT_005787AC099775579245283D3S36213232.001AC105753, AC099775, AC105753
S/G/Y/R/B/O NT_005787AC099775579439353WI-74953229.001AC067759, AC105753, AC067759, AC099775, AC105753
S/G/Y/R/B/O NT_005787AC099775579802723D3S37243231.001AC067759, AC105753, AC067759, AC099775, AC105753
S/G/Y/R/B/O NT_005787AC105753579837303      
S/G/Y/R/B/O NT_005787AC098478580011021      
S/G/Y/R/B/O NT_005787AC099781583923661CHLC.GCT4B103233.001 AC099781
S/G/Y/R/B/O NT_005787AC099559583932283      
S/G/Y/R/B/O NT_005787AC099327585740161WI-102913234.001 AC099327
S/G/Y/R/B/O NT_005787AC092050586898123WI-81163235.001AC097358, AC092050, AC097358


  NT_005787 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005787AC097358587533491      
S/G/Y/R/B/O NT_005787 - GCT16G123230.001AC021189, AC021189