Chromosome 3 - YAC Map - Single Contig

Chromosome 3 - YAC Map - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_005927	NT_029265	NT_028123	NT_006044	NT_022517	NT_005507	NT_022516	NT_005564
NT_005762	NT_005646	NT_028139	NT_033044	NT_005502	NT_022539	NT_022464	NT_005580
NT_033049	NT_005498	NT_006036	NT_005825	NT_029949	NT_005991	NT_005585	NT_022567
NT_028129	NT_005990	NT_030623	NT_022439	NT_006014	NT_033032	NT_005986	NT_033015
NT_033038	NT_022552	NT_005787	NT_033040	NT_022481	NT_005607	NT_033026	NT_005999
NT_005531	NT_022473	NT_022423	NT_005510	NT_022510	NT_022665	NT_028127	NT_022400
NT_005530	NT_029258	NT_022442	NT_005769	NT_005526	NT_022540	NT_022717	NT_005644
NT_022446	NT_005583	NT_033034	NT_005882	NT_033036	NT_022419	NT_006031	NT_022551
NT_022459	NT_033029	NT_022713	NT_022460	NT_033011	NT_022554	NT_022720	NT_005684
NT_005663	NT_033018	NT_022420	NT_033043	NT_022642	NT_005791	NT_022452	NT_022435
NT_033028	NT_022497	NT_022625	NT_005568	NT_022401	NT_033031	NT_026983	NT_022475
NT_033037	NT_022451	NT_005509	NT_005527	NT_033050	NT_030634	NT_033041	NT_005863
NT_022454	NT_022607	NT_022453	NT_025670	NT_030622	NT_033045	NT_022728	NT_031768
NT_019350	NT_022434	NT_029256	NT_022405	NT_022569	NT_006042	NT_022484	NT_005795
NT_015150	NT_022445	NT_030625	NT_005532	NT_029269	NT_022455	NT_029931	NT_033022
NT_029257	NT_005513	NT_005994	NT_030635	NT_022411	NT_005824	NT_033021	NT_005543
NT_005588	NT_006029	NT_022513	NT_005523	NT_033014	NT_006025	NT_022404	NT_005823
NT_033019	NT_022393	NT_025663	NT_005567	NT_030630	NT_005969	NT_033051	NT_025664
NT_005655	NT_022503	NT_022632	NT_033024	NT_022416	NT_022432	NT_033020	NT_033035
NT_033042	NT_005832	NT_022502	NT_005772	NT_019358	NT_005591	NT_005775	NT_022616
NT_005540	NT_029939	NT_005616	NT_005539	NT_022555	NT_005849	NT_005657	NT_005678
NT_005846	NT_005612	NT_033030	NT_022463	NT_022594	NT_022449	NT_022421	NT_005744
NT_022565	NT_022518	NT_005638	NT_022397	NT_022700	NT_022422	NT_025667	NT_033052
NT_022472	NT_033033	NT_022526	NT_022674	NT_022458	NT_022509	NT_005635	NT_033053
NT_005950	NT_022396	NT_005952	NT_022406	NT_022676	NT_029253	NT_030638	NT_005910
NT_022549	NT_033009	NT_005911	NT_005962	NT_031766	NT_005883	NT_005501	NT_005571
NT_033017	NT_033013	NT_029928	NT_033010	NT_005834	NT_005535	NT_033012	NT_033016
NT_022508

NT_005580

Links	Contig	Accession	Chr Start	Phs	STS Marker	YAC Chr	WI YAC	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_005580	AC105749	36135649	1
S/G/Y/R/B/O	NT_005580	AC097360	36155955	3
S/G/Y/R/B/O	NT_005580	AC011816	36322304	3
S/G/Y/R/B/O	NT_005580	AC006583	36489500	1	D3S1611	3	141.00	1		AC006583
S/G/Y/R/B/O	NT_005580	AC006583	36513165	1	WI-7345	3	142.00	1		AC006583
S/G/Y/R/B/O	NT_005580	AL450991	36533074	1
S/G/Y/R/B/O	NT_005580	AC058799	36614154	1
S/G/Y/R/B/O	NT_005580	AC097359	36744353	1	UTR-9854	8	184.00	2	AC058799, AC113194,	AC058799, AC097359, AC113194
S/G/Y/R/B/O	NT_005580	AC068979	36765821	1
S/G/Y/R/B/O	NT_005580	AC098648	36830405	3	WI-5491	3	139.00	1	AC068979,	AC068979, AC098648
S/G/Y/R/B/O	NT_005580	AC092051	36981640	3	AFM045XC3	3	137.00	1		AC092051
S/G/Y/R/B/O	NT_005580	AC092051	36994538	3	D3S1561	3	140.00	1		AC092051
S/G/Y/R/B/O	NT_005580	AC022292	37090380	1	CHLC.GATA82F11	3	138.00	1		AC022292
S/G/Y/R/B/O	NT_005580	AC105901	37309040	3	D3S3718	3	136.00	1		AC018468, AC105901
S/G/Y/R/B/O	NT_005580	AC018855	39066605	1	CHLC.GATA46C06	3	135.00	1		AC018855
S/G/Y/R/B/O	NT_005580	AC024097	37429803	1
S/G/Y/R/B/O	NT_005580	AP000493	37510610	3	D3S3623	3	144.00	1		AC092055, AP000493
S/G/Y/R/B/O	NT_005580	AP000493	37525241	3	NIB1520	3	143.00	1		AC009813, AC092055, AP000493
S/G/Y/R/B/O	NT_005580	AP000494	37641047	3	WI-3934	3	145.00	1		AC009813, AC092055, AP000494
S/G/Y/R/B/O	NT_005580	AP000495	37833871	3
S/G/Y/R/B/O	NT_005580	AP000496	37933871	3
S/G/Y/R/B/O	NT_005580	AP000497	38116024	3	D3S1298	3	146.00	1		AP000497
S/G/Y/R/B/O	NT_005580	AB026898	38218378	3	WI-8958	3	147.00	1	AC026346,	AB026898, AC026346, AC093116, AC099534, AP000498
S/G/Y/R/B/O	NT_005580	AB026898	38221186	3	WI-6058	3	153.00	1	AC026346,	AB026898, AC026346, AC093116, AC099534, AP000498
S/G/Y/R/B/O	NT_005580	AB026898	38304066	3	WI-692	3	149.00	1	AC026346,	AB026898, AC026346, AC093116, AC099534, AP000499
S/G/Y/R/B/O	NT_005580	AB026898	38351953	3	IB374	3	150.00	1	AC026346,	AB026898, AC016156, AC026346, AC055722, AC093116, AP000499
S/G/Y/R/B/O	NT_005580	AB026898	38407961	3	WI-5224	3	151.00	1	AC026346, AP000500,	AB026898, AC016156, AC026346, AP000500
S/G/Y/R/B/O	NT_005580	AP000500	38455346	3	D3S3639	3	152.00	1		AC092417
S/G/Y/R/B/O	NT_005580	AP000500	38467379	3	D3S1260	3	148.00	1		AC016156, AC092417
S/G/Y/R/B/O	NT_005580	AC104308	38635139	1
S/G/Y/R/B/O	NT_005580	AC055785	38667832	1
S/G/Y/R/B/O	NT_005580	AC016943	38737816	3
S/G/Y/R/B/O	NT_005580	AC026346	39073011	1
S/G/Y/R/B/O	NT_005580		-		WI-5879	3	134.00	1	AC113170,	AC113170