Chromosome 3 - YAC Map - Single Contig

Chromosome 3 - YAC Map - Single Contig

Description of this page

Line color code:

White: no markers placed on this accession
Blue: marker placement on STS map consistent with alignment of assembly contigs
Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
Red: marker placed on different chromosome in STS map
Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig

NT_005927	NT_029265	NT_028123	NT_006044	NT_022517	NT_005507	NT_022516	NT_005564
NT_005762	NT_005646	NT_028139	NT_033044	NT_005502	NT_022539	NT_022464	NT_005580
NT_033049	NT_005498	NT_006036	NT_005825	NT_029949	NT_005991	NT_005585	NT_022567
NT_028129	NT_005990	NT_030623	NT_022439	NT_006014	NT_033032	NT_005986	NT_033015
NT_033038	NT_022552	NT_005787	NT_033040	NT_022481	NT_005607	NT_033026	NT_005999
NT_005531	NT_022473	NT_022423	NT_005510	NT_022510	NT_022665	NT_028127	NT_022400
NT_005530	NT_029258	NT_022442	NT_005769	NT_005526	NT_022540	NT_022717	NT_005644
NT_022446	NT_005583	NT_033034	NT_005882	NT_033036	NT_022419	NT_006031	NT_022551
NT_022459	NT_033029	NT_022713	NT_022460	NT_033011	NT_022554	NT_022720	NT_005684
NT_005663	NT_033018	NT_022420	NT_033043	NT_022642	NT_005791	NT_022452	NT_022435
NT_033028	NT_022497	NT_022625	NT_005568	NT_022401	NT_033031	NT_026983	NT_022475
NT_033037	NT_022451	NT_005509	NT_005527	NT_033050	NT_030634	NT_033041	NT_005863
NT_022454	NT_022607	NT_022453	NT_025670	NT_030622	NT_033045	NT_022728	NT_031768
NT_019350	NT_022434	NT_029256	NT_022405	NT_022569	NT_006042	NT_022484	NT_005795
NT_015150	NT_022445	NT_030625	NT_005532	NT_029269	NT_022455	NT_029931	NT_033022
NT_029257	NT_005513	NT_005994	NT_030635	NT_022411	NT_005824	NT_033021	NT_005543
NT_005588	NT_006029	NT_022513	NT_005523	NT_033014	NT_006025	NT_022404	NT_005823
NT_033019	NT_022393	NT_025663	NT_005567	NT_030630	NT_005969	NT_033051	NT_025664
NT_005655	NT_022503	NT_022632	NT_033024	NT_022416	NT_022432	NT_033020	NT_033035
NT_033042	NT_005832	NT_022502	NT_005772	NT_019358	NT_005591	NT_005775	NT_022616
NT_005540	NT_029939	NT_005616	NT_005539	NT_022555	NT_005849	NT_005657	NT_005678
NT_005846	NT_005612	NT_033030	NT_022463	NT_022594	NT_022449	NT_022421	NT_005744
NT_022565	NT_022518	NT_005638	NT_022397	NT_022700	NT_022422	NT_025667	NT_033052
NT_022472	NT_033033	NT_022526	NT_022674	NT_022458	NT_022509	NT_005635	NT_033053
NT_005950	NT_022396	NT_005952	NT_022406	NT_022676	NT_029253	NT_030638	NT_005910
NT_022549	NT_033009	NT_005911	NT_005962	NT_031766	NT_005883	NT_005501	NT_005571
NT_033017	NT_033013	NT_029928	NT_033010	NT_005834	NT_005535	NT_033012	NT_033016
NT_022508

NT_005962

Links	Contig	Accession	Chr Start	Phs	STS Marker	YAC Chr	WI YAC	Plc	Other Accessions in Assembly	All Accessions
S/G/Y/R/B/O	NT_005962	AC026835	192479139	1
S/G/Y/R/B/O	NT_005962	AC109780	192486174	1
S/G/Y/R/B/O	NT_005962	AC009863	192488472	1
S/G/Y/R/B/O	NT_005962	AC112907	192496996	1	WI-7174	3	766.00	1	AC009863,	AB005803, AC009863, AC010952, AC112907
S/G/Y/R/B/O	NT_005962	AC112907	192682947	1	WI-9086	3	768.00	1	AC009863, AC012149, AC026612,	AC009863, AC012149, AC026612, AC092983, AC112907, M11437
S/G/Y/R/B/O	NT_005962	AC026612	192538273	1
S/G/Y/R/B/O	NT_005962	AC012149	192728408	1	SGC31473	3	767.00	1	AC009863, AC026612, AC072018, AC112907,	AC009863, AC012149, AC026612, AC072018, AC092983, AC112907
S/G/Y/R/B/O	NT_005962	AC104638	192607156	1
S/G/Y/R/B/O	NT_005962	AC066603	192615235	1
S/G/Y/R/B/O	NT_005962	AC022498	192617713	1
S/G/Y/R/B/O	NT_005962	AC072018	192673194	1
S/G/Y/R/B/O	NT_005962	AC068631	192799553	3	D3S3887	3	765.00	1	AC109780,	AB038689, AC016926, AC068631, AC109780, D67013
S/G/Y/R/B/O	NT_005962	AC068631	192802961	3	WI-3262	3	763.00	1	AC109780,	AB038689, AC016926, AC068631, AC109780, D67013
S/G/Y/R/B/O	NT_005962	AC068631	192836082	3	D3S3570	3	764.00	1	AC109780,	AC016926, AC109780
S/G/Y/R/B/O	NT_005962	AC068631	192914931	3	D3S1262	3	762.00	1		AC016926, AC068631
S/G/Y/R/B/O	NT_005962	AC007690	192959652	3
S/G/Y/R/B/O	NT_005962	AC007488	193147353	3	STSG-9973	3	769.00	1		AC007488
S/G/Y/R/B/O	NT_005962	AC069069	193241003	3
S/G/Y/R/B/O	NT_005962	AC007920	193288623	3	WI-9292	3	771.00	1	AC034190,	AB007617, AC007920, AC034190, AC046154, AC072019
S/G/Y/R/B/O	NT_005962	AC007920	193338179	3	WI-6431	3	770.00	1		AC046154
S/G/Y/R/B/O	NT_005962	AC007920	193406466	3	WI-2573	3	772.00	1	AC068299,	AC007920, AC068299, AC072019
S/G/Y/R/B/O	NT_005962	AC068299	193432326	1
S/G/Y/R/B/O	NT_005962	AC034190	193500897	1
S/G/Y/R/B/O	NT_005962	AC104635	193507654	1
S/G/Y/R/B/O	NT_005962	AC068318	193545263	1
S/G/Y/R/B/O	NT_005962	AC018919	193618951	3
S/G/Y/R/B/O	NT_005962	AC072022	193800474	1	SST	3	773.00	1	AC009653, AC034185, AC083854,	AC009653, AC034184, AC034185, AC072022, AC083854, J00306
S/G/Y/R/B/O	NT_005962	AC072022	193836939	1	D3S3686	3	774.00	1	AC080010,	AC072022, AC080010
S/G/Y/R/B/O	NT_005962	AC083854	193787806	1
S/G/Y/R/B/O	NT_005962	AC034185	193789929	1
S/G/Y/R/B/O	NT_005962	AC009653	193790480	1
S/G/Y/R/B/O	NT_005962	AC080010	193956082	1
S/G/Y/R/B/O	NT_005962	AC021414	193961327	1
S/G/Y/R/B/O	NT_005962	AC108681	193961333	3
S/G/Y/R/B/O	NT_005962	AC068295	194107571	3	D3S3651	3	775.00	1		AC068295
S/G/Y/R/B/O	NT_005962	AC026015	194150576	1
S/G/Y/R/B/O	NT_005962	AC092941	194168759	1
S/G/Y/R/B/O	NT_005962	AC112479	194239945	1	D3S3628	3	776.00	1	AC026015, AC066603,	AC026015, AC066603, AC112479
S/G/Y/R/B/O	NT_005962		-		AFMA189YF1	3	761.00	0