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  Chromosome 3 - YAC Map - Single Contig
 

Chromosome 3 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_005825
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005825AC099669410052743WI-93243178.001AC018473, AC092046, AC018473, AC092046, AC099669
S/G/Y/R/B/O NT_005825AC092046410941991      
S/G/Y/R/B/O NT_005825AC018473411307861      
S/G/Y/R/B/O NT_005825AC018358411571741NIB15883168.001 AC018358
S/G/Y/R/B/O NT_005825AC018358443808731WI-41933169.001 AC018358
S/G/Y/R/B/O NT_005825AC098649411988241      
S/G/Y/R/B/O NT_005825AC099052413692091      
S/G/Y/R/B/O NT_005825AC048329413932111D11S93011102.002AC022709, AL513530, AC022709, AC048329, AF438327, AL513530
S/G/Y/R/B/O NT_005825AC104165414237671WI-79473180.001AC098649, AC098649, AC104165
S/G/Y/R/B/O NT_005825AC104165442909551WI-33023179.001 AC104165
S/G/Y/R/B/O NT_005825AC104165443256161WI-43713181.001AC105902, AC104165, AC105902
S/G/Y/R/B/O NT_005825AC092048415727133D3S35643170.001AC006060, AC006060, AC092048
S/G/Y/R/B/O NT_005825AC092048415885123AFM210TB23166.001AC006060, AC006060, AC092048
S/G/Y/R/B/O NT_005825AC006060416229043D3S36853167.001AC092047, AC006060, AC092047
S/G/Y/R/B/O NT_005825AC010169417317403WI-72523164.001AC048329, AC092047, AC099052, AC010169, AC048329, AC092047, AC099052, U11087
S/G/Y/R/B/O NT_005825AC092047417490361      
S/G/Y/R/B/O NT_005825AC092041417758943      
S/G/Y/R/B/O NT_005825AC006059418425943D3S35593165.001AC092041, AC099052, AC006059, AC022064, AC092041, AC099052, AF184110
S/G/Y/R/B/O NT_005825AC099329419639353      
S/G/Y/R/B/O NT_005825AC092043420866533      
S/G/Y/R/B/O NT_005825AC092042421565013      
S/G/Y/R/B/O NT_005825AC104434423788081WI-26463173.001 AC104434
S/G/Y/R/B/O NT_005825AC068927424695261      
S/G/Y/R/B/O NT_005825AC068826424899201      
S/G/Y/R/B/O NT_005825AC093414424991911      
S/G/Y/R/B/O NT_005825AC078812425872371      
S/G/Y/R/B/O NT_005825AC104305426068573      
S/G/Y/R/B/O NT_005825AC099537427508693      
S/G/Y/R/B/O NT_005825AC099059429073813      
S/G/Y/R/B/O NT_005825AC097356430382043      
S/G/Y/R/B/O NT_005825AC104307431449071      
S/G/Y/R/B/O NT_005825AC009743433109503      
S/G/Y/R/B/O NT_005825AC104189434707713      
S/G/Y/R/B/O NT_005825AC099541440158731D3S36583163.001AC068861, AC068861, AC099541
S/G/Y/R/B/O NT_005825AC105902435949441      
S/G/Y/R/B/O NT_005825AC010170438330953WI-18503182.001AC006515, AC006515, AC010170
S/G/Y/R/B/O NT_005825AC006515438845213D3S35823183.001AC092500, AC006515, AC092500
S/G/Y/R/B/O NT_005825AC092500439579641      
S/G/Y/R/B/O NT_005825AC068861440175011      
S/G/Y/R/B/O NT_005825AC099560440215803      
S/G/Y/R/B/O NT_005825AC116441441304691      
S/G/Y/R/B/O NT_005825AJ312684445605892      
S/G/Y/R/B/O NT_005825AC099539446481963AFM155YA53184.001 AC099539
S/G/Y/R/B/O NT_005825AJ312686446832903      
S/G/Y/R/B/O NT_005825AC098476448272753WI-39583185.001 AC098476, AJ289880, AJ297357
S/G/Y/R/B/O NT_005825AC005669448426273      
S/G/Y/R/B/O NT_005825AC099782450026161      
S/G/Y/R/B/O NT_005825AJ312687451400472WI-28323192.002AC026349, AC026349, AJ312687
S/G/Y/R/B/O NT_005825AC024378451456271      
S/G/Y/R/B/O NT_005825AC104184452231423WI-93643174.001 AC104184


  NT_005825 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_005825AC104184452266603WI-64713176.001 AC104184
S/G/Y/R/B/O NT_005825AC104184452610573D3S36783172.001AC097638, AC097638, AC104184
S/G/Y/R/B/O NT_005825AC097638452939923      
S/G/Y/R/B/O NT_005825AC022985454059031      
S/G/Y/R/B/O NT_005825AC022627454121621D3S36473175.001AC022985, AC024378, AC022627, AC022985, AC024378
S/G/Y/R/B/O NT_005825AC105903455076241      
S/G/Y/R/B/O NT_005825AC006055455745423      
S/G/Y/R/B/O NT_005825AC104851456664241      
S/G/Y/R/B/O NT_005825AC112210457168641      
S/G/Y/R/B/O NT_005825AC073222457190011      
S/G/Y/R/B/O NT_005825AC006058460034443WI-64003177.002AC079387, AC107625, AC006058, AC079387, AC107625
S/G/Y/R/B/O NT_005825AC107625460060781      
S/G/Y/R/B/O NT_005825AC026349460541921WI-28323192.002AJ312687, AC026349, AJ312687
S/G/Y/R/B/O NT_005825AC104439461548151AFMB362WB93190.001AC026349, AC026349, AC104439
S/G/Y/R/B/O NT_005825AC104439462314581WI-91073188.001AJ312688, AC104439, AJ312688
S/G/Y/R/B/O NT_005825AC104439462361581WI-45303187.001AJ312688, AC104439, AJ312688
S/G/Y/R/B/O NT_005825AJ312688462053852      
S/G/Y/R/B/O NT_005825U95626464010473WI-93143189.001AC098613, AC098613, U80924, U95626
S/G/Y/R/B/O NT_005825U95626464648183FB14B33191.001AC098613, AC098613, U95626
S/G/Y/R/B/O NT_005825AC098613465083641CHLC.GAAT12D113186.001AJ310996, AC098613, AJ310996
S/G/Y/R/B/O NT_005825AC104304465152781      
S/G/Y/R/B/O NT_005825AC104187465238233      
S/G/Y/R/B/O NT_005825AJ310996467506102      
S/G/Y/R/B/O NT_005825 - IB32653171.001AL353629, AL353629