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  Chromosome 3 - YAC Map - Single Contig
 

Chromosome 3 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_005927 NT_029265 NT_028123 NT_006044 NT_022517 NT_005507 NT_022516 NT_005564
NT_005762 NT_005646 NT_028139 NT_033044 NT_005502 NT_022539 NT_022464 NT_005580
NT_033049 NT_005498 NT_006036 NT_005825 NT_029949 NT_005991 NT_005585 NT_022567
NT_028129 NT_005990 NT_030623 NT_022439 NT_006014 NT_033032 NT_005986 NT_033015
NT_033038 NT_022552 NT_005787 NT_033040 NT_022481 NT_005607 NT_033026 NT_005999
NT_005531 NT_022473 NT_022423 NT_005510 NT_022510 NT_022665 NT_028127 NT_022400
NT_005530 NT_029258 NT_022442 NT_005769 NT_005526 NT_022540 NT_022717 NT_005644
NT_022446 NT_005583 NT_033034 NT_005882 NT_033036 NT_022419 NT_006031 NT_022551
NT_022459 NT_033029 NT_022713 NT_022460 NT_033011 NT_022554 NT_022720 NT_005684
NT_005663 NT_033018 NT_022420 NT_033043 NT_022642 NT_005791 NT_022452 NT_022435
NT_033028 NT_022497 NT_022625 NT_005568 NT_022401 NT_033031 NT_026983 NT_022475
NT_033037 NT_022451 NT_005509 NT_005527 NT_033050 NT_030634 NT_033041 NT_005863
NT_022454 NT_022607 NT_022453 NT_025670 NT_030622 NT_033045 NT_022728 NT_031768
NT_019350 NT_022434 NT_029256 NT_022405 NT_022569 NT_006042 NT_022484 NT_005795
NT_015150 NT_022445 NT_030625 NT_005532 NT_029269 NT_022455 NT_029931 NT_033022
NT_029257 NT_005513 NT_005994 NT_030635 NT_022411 NT_005824 NT_033021 NT_005543
NT_005588 NT_006029 NT_022513 NT_005523 NT_033014 NT_006025 NT_022404 NT_005823
NT_033019 NT_022393 NT_025663 NT_005567 NT_030630 NT_005969 NT_033051 NT_025664
NT_005655 NT_022503 NT_022632 NT_033024 NT_022416 NT_022432 NT_033020 NT_033035
NT_033042 NT_005832 NT_022502 NT_005772 NT_019358 NT_005591 NT_005775 NT_022616
NT_005540 NT_029939 NT_005616 NT_005539 NT_022555 NT_005849 NT_005657 NT_005678
NT_005846 NT_005612 NT_033030 NT_022463 NT_022594 NT_022449 NT_022421 NT_005744
NT_022565 NT_022518 NT_005638 NT_022397 NT_022700 NT_022422 NT_025667 NT_033052
NT_022472 NT_033033 NT_022526 NT_022674 NT_022458 NT_022509 NT_005635 NT_033053
NT_005950 NT_022396 NT_005952 NT_022406 NT_022676 NT_029253 NT_030638 NT_005910
NT_022549 NT_033009 NT_005911 NT_005962 NT_031766 NT_005883 NT_005501 NT_005571
NT_033017 NT_033013 NT_029928 NT_033010 NT_005834 NT_005535 NT_033012 NT_033016
NT_022508


  NT_025667
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025667AC0732881802370491WI-92343688.001 AC073288
S/G/Y/R/B/O NT_025667AC0688531748615411      
S/G/Y/R/B/O NT_025667AC0617081748656563      
S/G/Y/R/B/O NT_025667AC0929181750326353      
S/G/Y/R/B/O NT_025667AC0263151750622691      
S/G/Y/R/B/O NT_025667AC0266671751948681D3S36563694.001 AC026667, AC098564
S/G/Y/R/B/O NT_025667AC0263721751786701      
S/G/Y/R/B/O NT_025667AC0787931752498883      
S/G/Y/R/B/O NT_025667AC0929191754027173      
S/G/Y/R/B/O NT_025667AC0081341755231373WI-11603695.001 AC008134, AC024714
S/G/Y/R/B/O NT_025667AC0081341755393263CHLC.GCT8C053697.001 AC008134, AC024714, AC026321
S/G/Y/R/B/O NT_025667AC0789531756749563      
S/G/Y/R/B/O NT_025667AC0557141759687601WI-30083698.001 AC016783, AC026312, AC026322, AC055714, AC073354, AC108712
S/G/Y/R/B/O NT_025667AC0557141759767101D3S15743703.001 AC016783, AC026312, AC026322, AC055714, AC073354, AC108712
S/G/Y/R/B/O NT_025667AC0557141759932841CHLC.GATA28E033699.001 AC016783, AC026312, AC026322, AC055714, AC073354, AC108712
S/G/Y/R/B/O NT_025667AC0692591760483093CHLC.GATA92B063702.001 AC026312
S/G/Y/R/B/O NT_025667AC0692591760984503WI-75073701.001AC020649, AC020649, AC026312, AC069259
S/G/Y/R/B/O NT_025667AC1086681761155761      
S/G/Y/R/B/O NT_025667AC0929641763211571      
S/G/Y/R/B/O NT_025667AC0206491763405541      
S/G/Y/R/B/O NT_025667AC0255451763466491      
S/G/Y/R/B/O NT_025667AC0695231764208333WI-68943704.001AC025545, AC092964, AC025545, AC069523, AC092964
S/G/Y/R/B/O NT_025667AC0169381765025091      
S/G/Y/R/B/O NT_025667AC0070511765745193WI-32183705.001AC007919, AC016938, AC007051, AC007919, AC016938, AC078792
S/G/Y/R/B/O NT_025667AC0079191766769933      
S/G/Y/R/B/O NT_025667AC1086671768131941D3S15563706.001 AC108667
S/G/Y/R/B/O NT_025667AC0692371767597711      
S/G/Y/R/B/O NT_025667AC0929481768542703      
S/G/Y/R/B/O NT_025667AC0639331769988483      
S/G/Y/R/B/O NT_025667AC0687581771652283      
S/G/Y/R/B/O NT_025667AC0687591773197183WI-9653709.001 AC026287, AC068759, AC092949
S/G/Y/R/B/O NT_025667AC0687591773198133WI-55103707.001 AC026287, AC068759, AC092949
S/G/Y/R/B/O NT_025667AC0184561774062823D3S15483708.001 AC018456
S/G/Y/R/B/O NT_025667AC0120821775044323      
S/G/Y/R/B/O NT_025667AC0929351775480913      
S/G/Y/R/B/O NT_025667AC0929671775657661      
S/G/Y/R/B/O NT_025667AC0929231777808921D3S15653710.001AC024178, AC024178, AC092923
S/G/Y/R/B/O NT_025667AC0929231786352091CHLC.GATA21A053332.002AC024178, AC110871, AC024178, AC092923, AC110871
S/G/Y/R/B/O NT_025667AC0241781778379861      
S/G/Y/R/B/O NT_025667AC0787951797124551D3S35233686.001 AC078795
S/G/Y/R/B/O NT_025667AC0692431779919223D3S36223677.001 AC069243
S/G/Y/R/B/O NT_025667AC0692431780111973WI-41133679.001AC016863, AC016863, AC069243
S/G/Y/R/B/O NT_025667AC0168631780894181      
S/G/Y/R/B/O NT_025667AC0277051781032311      
S/G/Y/R/B/O NT_025667AC0098621781955001      
S/G/Y/R/B/O NT_025667AC0617101782886323GCT17B013678.001AC009760, AC009862, AC009760, AC009862, AC061710, AL355364
S/G/Y/R/B/O NT_025667AC0617101783455193D3S16143676.001 AC011321, AC061710
S/G/Y/R/B/O NT_025667AC0183561784195173WI-54753680.001 AC011321, AC018356, AC040973
S/G/Y/R/B/O NT_025667AC0183561784882623D3S12433682.001 AC018356, AC040973
S/G/Y/R/B/O NT_025667AC1129111785492543WI-99403681.001AC069414, AC040973, AC069414, AC112911


  NT_025667 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_025667AC0694141786032831      
S/G/Y/R/B/O NT_025667AC0929541787222301      
S/G/Y/R/B/O NT_025667AC0461391788886821      
S/G/Y/R/B/O NT_025667AC0074801788993211      
S/G/Y/R/B/O NT_025667AC0223321789259671      
S/G/Y/R/B/O NT_025667AC0789851790738033D3S12823683.001 AC078985
S/G/Y/R/B/O NT_025667AC0240991791088813      
S/G/Y/R/B/O NT_025667AC0692201791539403      
S/G/Y/R/B/O NT_025667AC0000541792221193      
S/G/Y/R/B/O NT_025667AL3914141792862303      
S/G/Y/R/B/O NT_025667AC0740331793073823      
S/G/Y/R/B/O NT_025667AC1143051793852751D1S34771327.003AL031847, AL031847, AL589792
S/G/Y/R/B/O NT_025667AC0078491795898891WI-35203687.001AC078802, AC007849, AC078802
S/G/Y/R/B/O NT_025667AC0788021795563691D3S12123685.001AC007849, AC007849, AC078802
S/G/Y/R/B/O NT_025667AC0080401797249483      
S/G/Y/R/B/O NT_025667AC0238911799012011      
S/G/Y/R/B/O NT_025667AC0448561800339101      
S/G/Y/R/B/O NT_025667AC0080411803059343D3S15643691.001 AC008041
S/G/Y/R/B/O NT_025667AC0080411803684883D3S37233690.001 AC008041
S/G/Y/R/B/O NT_025667 - WI-30443674.000  
S/G/Y/R/B/O NT_025667 - WI-37043675.000  
S/G/Y/R/B/O NT_025667 - D3S12813684.001AC079382, AC078979, AC079382
S/G/Y/R/B/O NT_025667 - WI-38473689.001AC026316, AC026094, AC026316
S/G/Y/R/B/O NT_025667 - D3S12463692.001AC026316, AC026316
S/G/Y/R/B/O NT_025667 - WI-88593693.001AC026372, AC073288, AC026372, AC073288
S/G/Y/R/B/O NT_025667 - CHLC.GATA90E113700.000