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  Chromosome 6 - YAC Map - Single Contig
 

Chromosome 6 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_007422
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007422AC0108931730033681      
S/G/Y/R/B/O NT_007422AL5960891730754221D6S15796595.001 AL596089
S/G/Y/R/B/O NT_007422AL5960891799006811WI-75266596.001 AL596089, AL645523
S/G/Y/R/B/O NT_007422AL1099331731327713WI-74626597.001AC010893, AC010893, AL109933
S/G/Y/R/B/O NT_007422AL3916631732859723      
S/G/Y/R/B/O NT_007422AL3913611733062183      
S/G/Y/R/B/O NT_007422AL1393931734052803      
S/G/Y/R/B/O NT_007422AL5964521734908043      
S/G/Y/R/B/O NT_007422AL5910451735584863      
S/G/Y/R/B/O NT_007422AL1099421735838393      
S/G/Y/R/B/O NT_007422AL1329821737580563      
S/G/Y/R/B/O NT_007422AL4452151738477943      
S/G/Y/R/B/O NT_007422AL1387161739043873      
S/G/Y/R/B/O NT_007422AL0356971739696833D6S15506605.001 AL035697
S/G/Y/R/B/O NT_007422AL0356971739973743AFMB281WF16603.001 AL035697
S/G/Y/R/B/O NT_007422AL0356971740659303WI-49406604.001 AL035697
S/G/Y/R/B/O NT_007422AL0356971740701133AFMA155TD96602.001 AL035697
S/G/Y/R/B/O NT_007422AL0356971740827433D6S4116606.001 AL035697
S/G/Y/R/B/O NT_007422AL0785831741613033D6S2536241.001 AL078583
S/G/Y/R/B/O NT_007422AP0036991742464823D6S3056601.001AP000886, AP000886, AP003699
S/G/Y/R/B/O NT_007422AP0008861742902023      
S/G/Y/R/B/O NT_007422AP0020911744625573      
S/G/Y/R/B/O NT_007422AP0015771745157693      
S/G/Y/R/B/O NT_007422AP0015781747001153WI-61406599.001 AP001578
S/G/Y/R/B/O NT_007422AL0086311748414203      
S/G/Y/R/B/O NT_007422AP0008871749350563      
S/G/Y/R/B/O NT_007422AP0008881750302903      
S/G/Y/R/B/O NT_007422AP0015761751205473      
S/G/Y/R/B/O NT_007422AL6037881752013383      
S/G/Y/R/B/O NT_007422AL3549421753769583WI-74906607.002AC058815, AC058815, AL354942
S/G/Y/R/B/O NT_007422AL5902861754254363      
S/G/Y/R/B/O NT_007422AL1371821754891923      
S/G/Y/R/B/O NT_007422AL0785851756539883WI-95176611.001 AL078585, AL139043
S/G/Y/R/B/O NT_007422AL0785851756690743CHLC.GATA31F066610.001 AL078585
S/G/Y/R/B/O NT_007422AL0311211757551973WI-20266609.001 AL031121
S/G/Y/R/B/O NT_007422AL3561191759227873WI-102276612.001 AL133542, AL136229, AL356119
S/G/Y/R/B/O NT_007422AL0317811759384173      
S/G/Y/R/B/O NT_007422AL4453071760552363      
S/G/Y/R/B/O NT_007422AL1363141760816143      
S/G/Y/R/B/O NT_007422AL1370051761999253WI-44426616.001 AL137005
S/G/Y/R/B/O NT_007422AL4511281762736503      
S/G/Y/R/B/O NT_007422AL0786021763119313WI-54826614.001 AL078602
S/G/Y/R/B/O NT_007422AL0786021763424783WI-100336613.001 AL078602
S/G/Y/R/B/O NT_007422AL0786021763490263CHLC.GATA81B016615.001 AL078602
S/G/Y/R/B/O NT_007422AL0786021763733183WI-33666608.001 AL078602
S/G/Y/R/B/O NT_007422AL1362251764280463      
S/G/Y/R/B/O NT_007422AL1185181764701133      
S/G/Y/R/B/O NT_007422Z972051765965143WI-98146619.001 AC012266, Z97205
S/G/Y/R/B/O NT_007422AL1391901766867333      
S/G/Y/R/B/O NT_007422AL3589721769023653WI-47076618.001 AC067909, AL358972


  NT_007422 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007422AL5899521769072583      
S/G/Y/R/B/O NT_007422AL5130231769480513      
S/G/Y/R/B/O NT_007422AL5897271771354193WI-37186617.001 AL589727
S/G/Y/R/B/O NT_007422AL5961751771898893      
S/G/Y/R/B/O NT_007422AL4503451771946711      
S/G/Y/R/B/O NT_007422AL1335381773760133      
S/G/Y/R/B/O NT_007422AL0235791774851513      
S/G/Y/R/B/O NT_007422AL1361001775553863      
S/G/Y/R/B/O NT_007422AL3561251777274983      
S/G/Y/R/B/O NT_007422AL1173451777597263      
S/G/Y/R/B/O NT_007422AL1361301779026983      
S/G/Y/R/B/O NT_007422AL1601601779722723      
S/G/Y/R/B/O NT_007422AL1217891780595283      
S/G/Y/R/B/O NT_007422AL5919621781336553      
S/G/Y/R/B/O NT_007422AL5903021782185363      
S/G/Y/R/B/O NT_007422AL5904821783224343      
S/G/Y/R/B/O NT_007422AL1326611784176813      
S/G/Y/R/B/O NT_007422AL6274431785245403      
S/G/Y/R/B/O NT_007422AL1219561786873603      
S/G/Y/R/B/O NT_007422AL0220691788050253      
S/G/Y/R/B/O NT_007422Z980491789816153      
S/G/Y/R/B/O NT_007422AL0237751791615663D6S15856620.001 AL023775
S/G/Y/R/B/O NT_007422AL1591631792879083D6S2976621.001 AF019664, AL159163
S/G/Y/R/B/O NT_007422AL1591631793931683WI-87516622.001 AL159163
S/G/Y/R/B/O NT_007422AL1334581794017203      
S/G/Y/R/B/O NT_007422Z947211794330233      
S/G/Y/R/B/O NT_007422AL1219351795657133      
S/G/Y/R/B/O NT_007422AL3537471796668383      
S/G/Y/R/B/O NT_007422AL0213311797682373WI-31106624.001 AL021331
S/G/Y/R/B/O NT_007422AL5924441798953923D6S16976623.001 AL592444
S/G/Y/R/B/O NT_007422 - WI-67556600.000