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  Chromosome 6 - YAC Map - Single Contig
 

Chromosome 6 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_023451
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023451AL5839631620576143      
S/G/Y/R/B/O NT_023451AL3588521621377603      
S/G/Y/R/B/O NT_023451AL3553121621489141      
S/G/Y/R/B/O NT_023451AL5838351623374983      
S/G/Y/R/B/O NT_023451AL3554971623843393      
S/G/Y/R/B/O NT_023451AL1388901625996363      
S/G/Y/R/B/O NT_023451AL0967081626073583      
S/G/Y/R/B/O NT_023451AL3575611627143623      
S/G/Y/R/B/O NT_023451AL0310101627776183      
S/G/Y/R/B/O NT_023451AL4510611628846773      
S/G/Y/R/B/O NT_023451AL4503441629760803      
S/G/Y/R/B/O NT_023451AL4503391631327063D6S16876551.001 AL450339
S/G/Y/R/B/O NT_023451AL0350861632340213WI-52156553.001 AL035086, AL359638
S/G/Y/R/B/O NT_023451AL0350861632719333WI-88816552.001  
S/G/Y/R/B/O NT_023451AL0496941633547673      
S/G/Y/R/B/O NT_023451AL1332601634568483WI-49926554.001 AL133260
S/G/Y/R/B/O NT_023451AL1387331636099793WI-61136555.001 AL138733
S/G/Y/R/B/O NT_023451AL4510721636295383      
S/G/Y/R/B/O NT_023451AL3565351636343513      
S/G/Y/R/B/O NT_023451AL0333921637026763CHLC.GATA2B06.4656557.001 AL033392
S/G/Y/R/B/O NT_023451AL5904131637860743WI-77276566.001 AC023201, AL590413
S/G/Y/R/B/O NT_023451AL5905431639393763CHLC.GATA26A076558.001 AC022899, AL590543
S/G/Y/R/B/O NT_023451AL3594941640239523WI-48216560.001 AC022899, AC044828, AL359494
S/G/Y/R/B/O NT_023451AL3594941640343603WI-50296562.001 AC022899
S/G/Y/R/B/O NT_023451AL3594941640649083CHLC.GATA2F056561.001 AL359494
S/G/Y/R/B/O NT_023451AL0356951640913433WI-99426563.001 AL035695
S/G/Y/R/B/O NT_023451AL3563111642149603WI-49996559.001 AC058817, AL356311
S/G/Y/R/B/O NT_023451AL3563111642244003WI-50456564.001 AC058817, AL356311
S/G/Y/R/B/O NT_023451AL5909931642559993      
S/G/Y/R/B/O NT_023451AL0498211644423123D6S4406565.001 AL049821
S/G/Y/R/B/O NT_023451AL0785821645846653D6S4206567.001 AL078582
S/G/Y/R/B/O NT_023451AL4504011645881843      
S/G/Y/R/B/O NT_023451AL1388321645969453      
S/G/Y/R/B/O NT_023451AL3570811647358563      
S/G/Y/R/B/O NT_023451AL0495481648066413      
S/G/Y/R/B/O NT_023451AL5915071648930193      
S/G/Y/R/B/O NT_023451AL5899631649086053      
S/G/Y/R/B/O NT_023451AL1360791650658313WI-10406568.002 AC022885, AL136079
S/G/Y/R/B/O NT_023451AL3909601650888703      
S/G/Y/R/B/O NT_023451AL1333561651934673D6S2906569.001 AL133356
S/G/Y/R/B/O NT_023451AL1601621651989363      
S/G/Y/R/B/O NT_023451AL1332691653327773WI-55336570.001 AL133269, AL358992
S/G/Y/R/B/O NT_023451AL0802761653871203WI-11466571.001 AL080276
S/G/Y/R/B/O NT_023451AL3567871654833753      
S/G/Y/R/B/O NT_023451AL3569631655280763      
S/G/Y/R/B/O NT_023451AL1219671656491343WI-23956572.002AC015701, AC015703, AC015701, AC015703, AC022358, AL121967
S/G/Y/R/B/O NT_023451AL5908671657128153FB22B66573.001AC026853, AC091053, AC104360, AB020236, AC022358, AC026853, AC091053, AC104360, AJ400879, AL590867
S/G/Y/R/B/O NT_023451AL3581341657728313      
S/G/Y/R/B/O NT_023451AL1185171659233513D6S4416575.001 AC023863
S/G/Y/R/B/O NT_023451AL3914261659938973      


  NT_023451 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023451AL6039081660215333      
S/G/Y/R/B/O NT_023451AL3913761661124293      
S/G/Y/R/B/O NT_023451AL1388881662454263CHLC.GATA88H116574.001 AL138888
S/G/Y/R/B/O NT_023451AL1360941662470983      
S/G/Y/R/B/O NT_023451AL3598501664036653      
S/G/Y/R/B/O NT_023451AL1364441664371013      
S/G/Y/R/B/O NT_023451AL1327741665333113      
S/G/Y/R/B/O NT_023451AL4452201666313163      
S/G/Y/R/B/O NT_023451AL0333761667526713D6S4256585.001 AC073982
S/G/Y/R/B/O NT_023451AL5904011668211163      
S/G/Y/R/B/O NT_023451AL3570751669793803AFMA197ZB16584.001 AC068982, AL357075
S/G/Y/R/B/O NT_023451AL5914191670034493      
S/G/Y/R/B/O NT_023451AL6271081670862443GCT16F026583.001AL591499, AC068982, AL590707, AL591499, AL627108
S/G/Y/R/B/O NT_023451AL5914991671780943D6S4486582.001 AL590707, AL591499
S/G/Y/R/B/O NT_023451AL1369761672316533WI-37956579.001 AL136976
S/G/Y/R/B/O NT_023451AL1219521673548823D6S4736581.001 AL121952
S/G/Y/R/B/O NT_023451AL1362281673641263WI-39326578.001 AL136228
S/G/Y/R/B/O NT_023451AL1362281674054143D6S15566580.001 AL136228
S/G/Y/R/B/O NT_023451AL5902841674497173      
S/G/Y/R/B/O NT_023451AL3553431675415463D6S15776577.001 AC023567, AL355343
S/G/Y/R/B/O NT_023451AL5962021676639413      
S/G/Y/R/B/O NT_023451AL1391011676882233      
S/G/Y/R/B/O NT_023451AL0317731678616433D6S4426586.001 AL355359
S/G/Y/R/B/O NT_023451AL1334741679001403WI-98566576.001 AL133474
S/G/Y/R/B/O NT_023451AL5916031679951083      
S/G/Y/R/B/O NT_023451AL5124101680313332      
S/G/Y/R/B/O NT_023451AL5125101682868113D6S17086590.001 AL512510
S/G/Y/R/B/O NT_023451AL5838611683591943      
S/G/Y/R/B/O NT_023451AL5896931685563301AFMA103YA56589.001 AC018421, AL589693
S/G/Y/R/B/O NT_023451AL5124541685927533      
S/G/Y/R/B/O NT_023451AL5132641686923693      
S/G/Y/R/B/O NT_023451AL5126581687822843      
S/G/Y/R/B/O NT_023451AL1580331689552873      
S/G/Y/R/B/O NT_023451AL3552971690839633D6S16336588.001 AL355297
S/G/Y/R/B/O NT_023451AL3552971691515853WI-19916587.001 AL355297
S/G/Y/R/B/O NT_023451AL1625781692246873      
S/G/Y/R/B/O NT_023451AL1360911694074103      
S/G/Y/R/B/O NT_023451AL0498201694235523      
S/G/Y/R/B/O NT_023451AL5915451696109593      
S/G/Y/R/B/O NT_023451AC0217451696502701