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  Chromosome 6 - YAC Map - Single Contig
 

Chromosome 6 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_019424
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_019424AC0682361075676571      
S/G/Y/R/B/O NT_019424AC0157601076213211      
S/G/Y/R/B/O NT_019424AC0801751077349822      
S/G/Y/R/B/O NT_019424AC0215951078809691      
S/G/Y/R/B/O NT_019424AL6718841078923463      
S/G/Y/R/B/O NT_019424AL6070771079976183      
S/G/Y/R/B/O NT_019424AL3907891081710843      
S/G/Y/R/B/O NT_019424AL0343481082964213      
S/G/Y/R/B/O NT_019424AL1391081084168353      
S/G/Y/R/B/O NT_019424AL5124471084472793      
S/G/Y/R/B/O NT_019424AL5124061085492653      
S/G/Y/R/B/O NT_019424AL4996261086294123      
S/G/Y/R/B/O NT_019424AL0213671087440143CHLC.GATA27C076340.001 AL021367
S/G/Y/R/B/O NT_019424AL0213671087740853WI-43296339.001 AL021367
S/G/Y/R/B/O NT_019424AL0213671087782073D6S16826338.001 AL021367
S/G/Y/R/B/O NT_019424AL5904041088122193      
S/G/Y/R/B/O NT_019424AL1327761089191573      
S/G/Y/R/B/O NT_019424AL3551431090118743      
S/G/Y/R/B/O NT_019424AL0333791090743543      
S/G/Y/R/B/O NT_019424AL1599851091820153      
S/G/Y/R/B/O NT_019424AL0333751092964353      
S/G/Y/R/B/O NT_019424AL3569581094471243      
S/G/Y/R/B/O NT_019424AL0236561095746783WI-43866341.001 AL023656
S/G/Y/R/B/O NT_019424AL5904841095861393      
S/G/Y/R/B/O NT_019424AL3536791096512793      
S/G/Y/R/B/O NT_019424Z847191097653083CHLC.GATA5C03.9396343.001 AC021806, Z84719
S/G/Y/R/B/O NT_019424Z847191098506663CHLC.GGAA22E046342.001 Z84719
S/G/Y/R/B/O NT_019424AL3588731098752003      
S/G/Y/R/B/O NT_019424AL5962081099662293      
S/G/Y/R/B/O NT_019424AL0803161100790253      
S/G/Y/R/B/O NT_019424AL3571241101821623      
S/G/Y/R/B/O NT_019424AL5902391104071683AFM270XE56344.001 AL590239, AL590865
S/G/Y/R/B/O NT_019424AL5911021104293173      
S/G/Y/R/B/O NT_019424AL5907271104730173      
S/G/Y/R/B/O NT_019424AL5897401106777202D6S17166345.001 AC018703, AC031982, AL589740
S/G/Y/R/B/O NT_019424AL6070711107866943      
S/G/Y/R/B/O NT_019424Z844821108943813WI-28966346.001 AC022813, AC025485, Z84482
S/G/Y/R/B/O NT_019424AL5903951109402903      
S/G/Y/R/B/O NT_019424AL5898261110949373      
S/G/Y/R/B/O NT_019424AL0223951112129343      
S/G/Y/R/B/O NT_019424AL0786031113397163      
S/G/Y/R/B/O NT_019424AL5900221114899713      
S/G/Y/R/B/O NT_019424AL5918031116067023D6S17176347.001 AL591803
S/G/Y/R/B/O NT_019424AL0343711116713633D6S15656348.001 AL034371
S/G/Y/R/B/O NT_019424AL5135501117363483      
S/G/Y/R/B/O NT_019424AL1377841118641533      
S/G/Y/R/B/O NT_019424AL0350871119914663      
S/G/Y/R/B/O NT_019424AL3909591121113163      
S/G/Y/R/B/O NT_019424AL5907251122164553      
S/G/Y/R/B/O NT_019424AL6039091123943423      


  NT_019424 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_019424AL5907321123958433      
S/G/Y/R/B/O NT_019424AL0802851125377413CHLC.GATA44.1086349.001 AL080285
S/G/Y/R/B/O NT_019424AL5838221126356383      
S/G/Y/R/B/O NT_019424AL1219481127621523      
S/G/Y/R/B/O NT_019424Z860621129020233WI-65166351.001 AC026619, Z86062
S/G/Y/R/B/O NT_019424Z860621129422053AFM176XG96350.001 Z86062
S/G/Y/R/B/O NT_019424AL5132071129589113      
S/G/Y/R/B/O NT_019424AL1219651129702933      
S/G/Y/R/B/O NT_019424AL5915851130832153      
S/G/Y/R/B/O NT_019424AL3561221131231083      
S/G/Y/R/B/O NT_019424AL1333381131939633      
S/G/Y/R/B/O NT_019424AL1617201133141773      
S/G/Y/R/B/O NT_019424AL1099341133405273      
S/G/Y/R/B/O NT_019424AL4504271134907393CHLC.GGAA19D056352.001 AL450427
S/G/Y/R/B/O NT_019424AL1604041135045153      
S/G/Y/R/B/O NT_019424AL3652761135640143D6S4686353.001 AL365276
S/G/Y/R/B/O NT_019424AP0025281137374463D6S15556354.001 AB041511, AC023579, AL356861, AP002528
S/G/Y/R/B/O NT_019424AP0025281137785423WI-65306355.001 AB041511, AC013311, AL356861, AP002528
S/G/Y/R/B/O NT_019424AP0025281139008113D6S15436356.001 AB041731, AC013311, AL109919, AP002528
S/G/Y/R/B/O NT_019424AP0025291140568203D6S4496357.001 AB042031, AL356438, AP002529
S/G/Y/R/B/O NT_019424AP0025291142037733D6S16426360.001 AL359174
S/G/Y/R/B/O NT_019424AP0025301142923733D6S17096358.001 AL359174
S/G/Y/R/B/O NT_019424AP0025301142934853D6S2836359.001 AL359174
S/G/Y/R/B/O NT_019424AP0025301143696843D6S4346361.001 AB042030, AL355532, AP002530
S/G/Y/R/B/O NT_019424AP0025301144507853CHLC.ATA22H106362.001 AB041340, AL355532, AP002530
S/G/Y/R/B/O NT_019424AP0025311145107133      
S/G/Y/R/B/O NT_019424AL5922981146801873AFMA084ZE96363.001 AL592298
S/G/Y/R/B/O NT_019424AL3571391147142913      
S/G/Y/R/B/O NT_019424AL3575061148407133