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  Chromosome 6 - YAC Map - Single Contig
 

Chromosome 6 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033125 NT_033164 NT_033126 NT_033128 NT_033144 NT_033156 NT_033142 NT_033120
NT_033135 NT_033151 NT_033162 NT_033163 NT_033143 NT_033124 NT_033129 NT_033138
NT_033159 NT_026313 NT_033155 NT_033173 NT_033140 NT_033153 NT_023442 NT_033146
NT_033136 NT_033149 NT_033154 NT_033160 NT_033134 NT_029317 NT_007592 NT_033137
NT_033139 NT_033147 NT_033158 NT_033161 NT_033145 NT_033141 NT_033123 NT_033130
NT_033127 NT_033122 NT_033152 NT_033121 NT_033148 NT_033171 NT_033132 NT_033943
NT_033172 NT_033948 NT_033131 NT_033946 NT_007540 NT_023463 NT_007158 NT_029990
NT_023399 NT_033133 NT_007299 NT_019424 NT_007563 NT_033944 NT_033947 NT_030710
NT_025741 NT_027046 NT_023451 NT_029991 NT_007422 NT_007302 NT_007627 NT_007583


  NT_007540
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007540AC067915729671001      
S/G/Y/R/B/O NT_007540AL049551729747273      
S/G/Y/R/B/O NT_007540AL356135730399643      
S/G/Y/R/B/O NT_007540AL049544731384723WI-95316214.001 AL049544
S/G/Y/R/B/O NT_007540AL049544731610493D6S16956215.001 AL049544
S/G/Y/R/B/O NT_007540AL391644732122013      
S/G/Y/R/B/O NT_007540AL133459732777143      
S/G/Y/R/B/O NT_007540AL355347733772803      
S/G/Y/R/B/O NT_007540AL590202734634783      
S/G/Y/R/B/O NT_007540AL360220735539223D6S17106217.001 AC067786, AL360220
S/G/Y/R/B/O NT_007540AL161440735749133      
S/G/Y/R/B/O NT_007540AL138882736565933      
S/G/Y/R/B/O NT_007540Z93021737615363D6S4026216.001 Z93021
S/G/Y/R/B/O NT_007540AL589682738485903      
S/G/Y/R/B/O NT_007540AL451108739021003      
S/G/Y/R/B/O NT_007540AL355375739458393      
S/G/Y/R/B/O NT_007540AL589736741492403      
S/G/Y/R/B/O NT_007540AL121931742776853CHLC.GATA49D036236.001 AL121931
S/G/Y/R/B/O NT_007540AL121931742778863CHLC.GATA51E066235.001 AL121931
S/G/Y/R/B/O NT_007540AL590645743362823      
S/G/Y/R/B/O NT_007540AL590558744059313      
S/G/Y/R/B/O NT_007540AL359675745047593      
S/G/Y/R/B/O NT_007540AL450346746136603      
S/G/Y/R/B/O NT_007540AL590456747820273      
S/G/Y/R/B/O NT_007540AL121949748954103WI-34436234.001AC067915, AC067915, AC073286, AL121949
S/G/Y/R/B/O NT_007540AL390854749620523      
S/G/Y/R/B/O NT_007540AL135905750872013WI-95816233.001 AF051160
S/G/Y/R/B/O NT_007540AL135905750893583STSG-99686227.001 AC023349, AL135905
S/G/Y/R/B/O NT_007540AL513043751067503      
S/G/Y/R/B/O NT_007540AL445676751477313      
S/G/Y/R/B/O NT_007540AL050329751611393      
S/G/Y/R/B/O NT_007540AL445677752476933      
S/G/Y/R/B/O NT_007540AL354913753862913CHLC.GATA64D026232.001 AC022949
S/G/Y/R/B/O NT_007540AL590546754384583      
S/G/Y/R/B/O NT_007540AL590784755094202      
S/G/Y/R/B/O NT_007540AL603767756666393      
S/G/Y/R/B/O NT_007540AL078597757634863CHLC.ATC4D016231.001 AL078597
S/G/Y/R/B/O NT_007540AL078597757752773WI-58906229.001 AL078597
S/G/Y/R/B/O NT_007540AL357375758967253      
S/G/Y/R/B/O NT_007540AL356454760132923CHLC.ATA22E076230.001 AL356454
S/G/Y/R/B/O NT_007540AL355357761211903      
S/G/Y/R/B/O NT_007540AL450324762373513      
S/G/Y/R/B/O NT_007540AL137007763390973      
S/G/Y/R/B/O NT_007540AL109922764447763      
S/G/Y/R/B/O NT_007540AL450394765392613      
S/G/Y/R/B/O NT_007540AL353669765782493      
S/G/Y/R/B/O NT_007540AL133322766190323GCT16D066228.001 AC025050, AL133322, AL357502
S/G/Y/R/B/O NT_007540AL365217767731183      
S/G/Y/R/B/O NT_007540AL589916768779753      
S/G/Y/R/B/O NT_007540AL132767769101503      


  NT_007540 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_007540AL109612770144773WI-46806224.001 AL109612
S/G/Y/R/B/O NT_007540AL353153770358203      
S/G/Y/R/B/O NT_007540AL450319771311503      
S/G/Y/R/B/O NT_007540AL451055772559303      
S/G/Y/R/B/O NT_007540AL391500773508523D6S15516223.001 AL391500
S/G/Y/R/B/O NT_007540AL513492774488263      
S/G/Y/R/B/O NT_007540AL049842775605033      
S/G/Y/R/B/O NT_007540AL132793777504223WI-18926221.001AC002485, AC002485, AL132793
S/G/Y/R/B/O NT_007540AC002485777995923D6S4306222.001 AC002485
S/G/Y/R/B/O NT_007540AL450164779073003      
S/G/Y/R/B/O NT_007540AL139334780367453CHLC.GATA74F076220.001 AL139334
S/G/Y/R/B/O NT_007540AL450336782414343AFMA047YE16219.001 AL450336, AL591001
S/G/Y/R/B/O NT_007540AL590673782595683      
S/G/Y/R/B/O NT_007540AL590995784483003WI-57066218.001 AL590995
S/G/Y/R/B/O NT_007540AL590678784940663      
S/G/Y/R/B/O NT_007540AL590874786419153      
S/G/Y/R/B/O NT_007540AL591004786902803CHLC.ATA29B096226.001 AC021214, AL591004, AL592074
S/G/Y/R/B/O NT_007540AL592081788158523      
S/G/Y/R/B/O NT_007540AL591605788178463      
S/G/Y/R/B/O NT_007540AL365503789869443D6S4056225.001 AC016848, AL365503
S/G/Y/R/B/O NT_007540AL049860790569973      
S/G/Y/R/B/O NT_007540AL512368791533643      
S/G/Y/R/B/O NT_007540AC025085793009831      
S/G/Y/R/B/O NT_007540AC073300793587231      
S/G/Y/R/B/O NT_007540AC108669794864831