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  Chromosome 9 - YAC Map - Single Contig
 

Chromosome 9 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_035002 NT_023974 NT_033214 NT_030759 NT_030753
NT_033213 NT_035003 NT_033210 NT_035004 NT_008389 NT_035005 NT_035006 NT_035007
NT_035008 NT_033219 NT_033217 NT_035009 NT_029359 NT_033209 NT_033206 NT_033208
NT_035010 NT_031835 NT_033212 NT_031832 NT_035011 NT_033205 NT_033211 NT_033207
NT_008580 NT_023935 NT_028278 NT_023975 NT_023932 NT_024010 NT_035012 NT_008476
NT_035013 NT_033216 NT_008470 NT_017568 NT_029366 NT_008338 NT_035014 NT_017539
NT_008554 NT_030058 NT_019501 NT_033215 NT_024000 NT_035015 NT_023929


  NT_008470
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008470AC007800923570281      
S/G/Y/R/B/O NT_008470AL136084923649653      
S/G/Y/R/B/O NT_008470AL354923925514183D9S2729273.001 AL354923.12
S/G/Y/R/B/O NT_008470AL354923925655383WI-40179274.001 AL354923.12
S/G/Y/R/B/O NT_008470AL354923926324343WI-73449275.001 AL354923.12
S/G/Y/R/B/O NT_008470AL162427926497603      
S/G/Y/R/B/O NT_008470AL137067928584303D9S1769278.001 AC009830.4, AC027143.2, AL137067.7
S/G/Y/R/B/O NT_008470AL137067929491033WI-37909276.001 AL137067.7, AL589846.5
S/G/Y/R/B/O NT_008470AL589846929510833      
S/G/Y/R/B/O NT_008470AL162394930326933D9S17839277.001 AL162394.14
S/G/Y/R/B/O NT_008470AL138835931350193      
S/G/Y/R/B/O NT_008470AL359710932286343      
S/G/Y/R/B/O NT_008470AL358937934026743      
S/G/Y/R/B/O NT_008470AL360084935475633      
S/G/Y/R/B/O NT_008470AL137072935724103      
S/G/Y/R/B/O NT_008470AL356798937432403      
S/G/Y/R/B/O NT_008470AL445214938627523WI-6889280.001 AL445214.7
S/G/Y/R/B/O NT_008470AL445214938697123NIB14379279.001 AL445214.7
S/G/Y/R/B/O NT_008470AL353805939426183D9S1739281.001 AL353805.20
S/G/Y/R/B/O NT_008470AL353805940380573D9S18579283.001 AL353805.20
S/G/Y/R/B/O NT_008470AL354917940550643      
S/G/Y/R/B/O NT_008470AL390876941643213      
S/G/Y/R/B/O NT_008470AL357293944143193WI-99139282.001 AL357293.16
S/G/Y/R/B/O NT_008470AL162395944504883      
S/G/Y/R/B/O NT_008470AL357935945113483      
S/G/Y/R/B/O NT_008470AL161631946783953      
S/G/Y/R/B/O NT_008470AL359893948874163WI-68899288.001 AL359893.16
S/G/Y/R/B/O NT_008470AL359893949003333D9S16909286.001 AL359893.16
S/G/Y/R/B/O NT_008470AL359893949247673D9S19529287.001 AL359893.16
S/G/Y/R/B/O NT_008470AL353621949608613WI-20089284.001 AL353621.19
S/G/Y/R/B/O NT_008470AL353621949831373WI-84909285.001 AC002469.8, AL353621.19
S/G/Y/R/B/O NT_008470AL591377951029563      
S/G/Y/R/B/O NT_008470AL356516952441013      
S/G/Y/R/B/O NT_008470AL133413953385013      
S/G/Y/R/B/O NT_008470AL360018955123383WI-44529289.001 AL360018.13
S/G/Y/R/B/O NT_008470AL596454955131113      
S/G/Y/R/B/O NT_008470AL355588956248633      
S/G/Y/R/B/O NT_008470AL391867957461383      
S/G/Y/R/B/O NT_008470AL137021959139713AFM206YC79290.001 AC009555.5, AL137021.15
S/G/Y/R/B/O NT_008470AL442644959910403      
S/G/Y/R/B/O NT_008470AL354701961512043      
S/G/Y/R/B/O NT_008470AL450312962805703      
S/G/Y/R/B/O NT_008470AL365396965156543D9S2719291.001 AL365396.10
S/G/Y/R/B/O NT_008470AL449304965551453      
S/G/Y/R/B/O NT_008470AL359679965923093      
S/G/Y/R/B/O NT_008470AL589823966117743      
S/G/Y/R/B/O NT_008470AL589844967942443      
S/G/Y/R/B/O NT_008470AL390962969502263      
S/G/Y/R/B/O NT_008470AL356576971197963      
S/G/Y/R/B/O NT_008470AL662794971396943      


  NT_008470 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_008470AL590386971591753      
S/G/Y/R/B/O NT_008470AL512639973563513D9S1279292.001 AL512639.8
S/G/Y/R/B/O NT_008470AL590381974104593      
S/G/Y/R/B/O NT_008470AL161791975908893      
S/G/Y/R/B/O NT_008470AL354938976977103      
S/G/Y/R/B/O NT_008470AL596402978754483      
S/G/Y/R/B/O NT_008470AL512646978774423      
S/G/Y/R/B/O NT_008470AL450426980319023      
S/G/Y/R/B/O NT_008470AL359846981659043      
S/G/Y/R/B/O NT_008470AL353685983618723D9S539293.001 AL353685.23
S/G/Y/R/B/O NT_008470AL359182984754243      
S/G/Y/R/B/O NT_008470AL669893985701413      
S/G/Y/R/B/O NT_008470AL591506986129083      
S/G/Y/R/B/O NT_008470AL590368987867303      
S/G/Y/R/B/O NT_008470AL450265988776403      
S/G/Y/R/B/O NT_008470AL161627989595683WI-95569294.001 AL161627.13
S/G/Y/R/B/O NT_008470AL158070990831633      
S/G/Y/R/B/O NT_008470AL627247992500683      
S/G/Y/R/B/O NT_008470AL592437992726973      
S/G/Y/R/B/O NT_008470AL592488993242223      
S/G/Y/R/B/O NT_008470AL392084994730663D9S1729296.001 AL392084.6
S/G/Y/R/B/O NT_008470AL392084994906523CHLC.GATA27.969295.001 AL392084.6
S/G/Y/R/B/O NT_008470AL732323995856673      
S/G/Y/R/B/O NT_008470AL611922996284533      
S/G/Y/R/B/O NT_008470AL512601998050653      
S/G/Y/R/B/O NT_008470AL669899999685823      
S/G/Y/R/B/O NT_008470AL451140999705763      
S/G/Y/R/B/O NT_008470AL5126491001563143      
S/G/Y/R/B/O NT_008470AL5903621002899453      
S/G/Y/R/B/O NT_008470AL5125931004406443      
S/G/Y/R/B/O NT_008470AC0681881005895591      
S/G/Y/R/B/O NT_008470AL4454871006841633      
S/G/Y/R/B/O NT_008470AL1378521008504943WI-51609297.001 AL137852.15
S/G/Y/R/B/O NT_008470AL3595521009586033      
S/G/Y/R/B/O NT_008470AL3602181010430733      
S/G/Y/R/B/O NT_008470AL3899151012634433CHLC.GATA7C089299.001 AC073037.2, AL389915.19
S/G/Y/R/B/O NT_008470AL1623891013798453WI-42869298.001 AC073037.2, AL162389.21
S/G/Y/R/B/O NT_008470AL3531371014274033      
S/G/Y/R/B/O NT_008470AL3584321015996433WI-100699300.001 AC068050.6, AL358432.11