Home    Genome Browser    BLAT Search    Help
  Chromosome 9 - YAC Map - Single Contig
 

Chromosome 9 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_035002 NT_023974 NT_033214 NT_030759 NT_030753
NT_033213 NT_035003 NT_033210 NT_035004 NT_008389 NT_035005 NT_035006 NT_035007
NT_035008 NT_033219 NT_033217 NT_035009 NT_029359 NT_033209 NT_033206 NT_033208
NT_035010 NT_031835 NT_033212 NT_031832 NT_035011 NT_033205 NT_033211 NT_033207
NT_008580 NT_023935 NT_028278 NT_023975 NT_023932 NT_024010 NT_035012 NT_008476
NT_035013 NT_033216 NT_008470 NT_017568 NT_029366 NT_008338 NT_035014 NT_017539
NT_008554 NT_030058 NT_019501 NT_033215 NT_024000 NT_035015 NT_023929


  NT_027081
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_027081AL162413111719433D9S256952.001 AL162413.26
S/G/Y/R/B/O NT_027081AL354952112069643D9S269953.001 AL354952.12
S/G/Y/R/B/O NT_027081AL354992112312213      
S/G/Y/R/B/O NT_027081AL451129114031323      
S/G/Y/R/B/O NT_027081AL355672115235923WI-9748955.001 AL355672.12
S/G/Y/R/B/O NT_027081AL445586115653313      
S/G/Y/R/B/O NT_027081AL592227117637293      
S/G/Y/R/B/O NT_027081AL513332118172643      
S/G/Y/R/B/O NT_027081AL512596119397953      
S/G/Y/R/B/O NT_027081AL353595119609203      
S/G/Y/R/B/O NT_027081AL596262121265493      
S/G/Y/R/B/O NT_027081AL589678121863893WI-4388956.001 AL589678.9, AL596091.2
S/G/Y/R/B/O NT_027081AL357772122986103      
S/G/Y/R/B/O NT_027081AL162422124591153      
S/G/Y/R/B/O NT_027081AL353605125224263      
S/G/Y/R/B/O NT_027081AL139114126555803      
S/G/Y/R/B/O NT_027081AL138753128747253WI-7091958.001 AL138753.8
S/G/Y/R/B/O NT_027081AL157828129496703      
S/G/Y/R/B/O NT_027081AL353711130788613D9S267957.001 AL353711.13
S/G/Y/R/B/O NT_027081AL161449132172653CHLC.GATA50G08960.001 AC013514.3, AL161449.7
S/G/Y/R/B/O NT_027081AL161449132217433D9S268959.001 AL161449.7
S/G/Y/R/B/O NT_027081AL353639132955083      
S/G/Y/R/B/O NT_027081AL162386133973303      
S/G/Y/R/B/O NT_027081AL583785135594683      
S/G/Y/R/B/O NT_027081AL354948136730043      
S/G/Y/R/B/O NT_027081AL138750137702823      
S/G/Y/R/B/O NT_027081AL353810138758753WI-2432961.001 AL353810.9
S/G/Y/R/B/O NT_027081AL158157139052303      
S/G/Y/R/B/O NT_027081AL691508140885403      
S/G/Y/R/B/O NT_027081AL360089141018693      
S/G/Y/R/B/O NT_027081AL441963142474163WI-6883962.001 AL133478.12, AL441963.7
S/G/Y/R/B/O NT_027081AL449443143885083      
S/G/Y/R/B/O NT_027081AL136366144395813D9S1869963.001 AL136366.24
S/G/Y/R/B/O NT_027081AL137017145200523D9S274964.001 AC024344.1, AL137017.9
S/G/Y/R/B/O NT_027081AL159169146762693      
S/G/Y/R/B/O NT_027081AL390732147623243      
S/G/Y/R/B/O NT_027081AL512643149054703      
S/G/Y/R/B/O NT_027081AL354672150202763      
S/G/Y/R/B/O NT_027081AL592293150835303      
S/G/Y/R/B/O NT_027081AL390958152391043      
S/G/Y/R/B/O NT_027081AL591393153028953      
S/G/Y/R/B/O NT_027081AL390246154758063      
S/G/Y/R/B/O NT_027081AL441925156312183WI-6705971.001 AL359998.21, AL391335.23, AL441925.16
S/G/Y/R/B/O NT_027081AL513423156314273      
S/G/Y/R/B/O NT_027081AL662788158019633      
S/G/Y/R/B/O NT_027081AL359877159063263      
S/G/Y/R/B/O NT_027081AL160052161235663CHLC.GAAT2F06972.002 AL160052.21, AL592153.6, AL691495.5, AL731646.6
S/G/Y/R/B/O NT_027081AL160053162436443D9S285965.001 AL160053.15
S/G/Y/R/B/O NT_027081AL160053163069753D9S1782968.001 AL160053.15
S/G/Y/R/B/O NT_027081AL160053163341753WI-10873969.001 AL160053.15, AL513424.2


  NT_027081 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_027081AL513424164062393GCT16G03966.001 AL449344.5, AL513424.2
S/G/Y/R/B/O NT_027081AL513424164097903D9S156967.001 AL449344.5, AL513424.2
S/G/Y/R/B/O NT_027081AL449344165011943      
S/G/Y/R/B/O NT_027081AL646003165587873      
S/G/Y/R/B/O NT_027081AL449983165844623D9S1839970.001 AL449983.2
S/G/Y/R/B/O NT_027081AL450003168405263WI-3899973.001 AL450003.2
S/G/Y/R/B/O NT_027081AL162418169047063      
S/G/Y/R/B/O NT_027081AL450105169605563      
S/G/Y/R/B/O NT_027081AL358117171200733      
S/G/Y/R/B/O NT_027081AL162725172287113WI-10810975.002 AC023999.2, AC073492.18, AC087472.1, AL162725.10, AL499603.10
S/G/Y/R/B/O NT_027081AL354711173140833      
S/G/Y/R/B/O NT_027081AL354738174742093      
S/G/Y/R/B/O NT_027081AL590377175464273WI-8411974.001 AC015640.6, AL590377.4
S/G/Y/R/B/O NT_027081AL133214177939323D9S157977.001 AL133214.12
S/G/Y/R/B/O NT_027081AL139115179623853IB2409976.001 AL139115.5
S/G/Y/R/B/O NT_027081AL645565179654033      
S/G/Y/R/B/O NT_027081AL513502181097123      
S/G/Y/R/B/O NT_027081AL450004181717471      
S/G/Y/R/B/O NT_027081AL513503181913143      
S/G/Y/R/B/O NT_027081AL512664182837483      
S/G/Y/R/B/O NT_027081AL445674184527613CHLC.GATA27A11978.001 AL445674.12
S/G/Y/R/B/O NT_027081AL442638185076153