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  Chromosome 9 - YAC Map - Single Contig
 

Chromosome 9 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_035002 NT_023974 NT_033214 NT_030759 NT_030753
NT_033213 NT_035003 NT_033210 NT_035004 NT_008389 NT_035005 NT_035006 NT_035007
NT_035008 NT_033219 NT_033217 NT_035009 NT_029359 NT_033209 NT_033206 NT_033208
NT_035010 NT_031835 NT_033212 NT_031832 NT_035011 NT_033205 NT_033211 NT_033207
NT_008580 NT_023935 NT_028278 NT_023975 NT_023932 NT_024010 NT_035012 NT_008476
NT_035013 NT_033216 NT_008470 NT_017568 NT_029366 NT_008338 NT_035014 NT_017539
NT_008554 NT_030058 NT_019501 NT_033215 NT_024000 NT_035015 NT_023929


  NT_023935
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023935AL354700717511033      
S/G/Y/R/B/O NT_023935AL353705719405613WI-94199195.001 AL353705.23
S/G/Y/R/B/O NT_023935AL353594719655963      
S/G/Y/R/B/O NT_023935AL592448720605873      
S/G/Y/R/B/O NT_023935AL445684720625813      
S/G/Y/R/B/O NT_023935AL592221722006723      
S/G/Y/R/B/O NT_023935AL592047724969913WI-43989196.001 AL353690.5, AL592047.10
S/G/Y/R/B/O NT_023935AL354675726401593D9S1539197.001 AL354675.20
S/G/Y/R/B/O NT_023935AL359642726830533      
S/G/Y/R/B/O NT_023935AL512634728400883AFMA101XD19199.001 AL512634.9
S/G/Y/R/B/O NT_023935AL160166729277303D9S17809198.001 AL160166.10
S/G/Y/R/B/O NT_023935AL450243730344353      
S/G/Y/R/B/O NT_023935AL358975730999433      
S/G/Y/R/B/O NT_023935AL445252732961803      
S/G/Y/R/B/O NT_023935AL353813733158573      
S/G/Y/R/B/O NT_023935AL161912735088933D9S18679201.001 AC023067.3, AL161912.15
S/G/Y/R/B/O NT_023935AL161912735979753D9S18439200.001 AC023067.3, AL161912.15
S/G/Y/R/B/O NT_023935AL161782736093473      
S/G/Y/R/B/O NT_023935AL160168736847463      
S/G/Y/R/B/O NT_023935AL161780738339483      
S/G/Y/R/B/O NT_023935AL354937740271253CHLC.GATA21F059203.001 AL354937.12
S/G/Y/R/B/O NT_023935AL390788741766933AFM273VB19205.001 AC011876.3, AL390788.15
S/G/Y/R/B/O NT_023935AL160267741845453      
S/G/Y/R/B/O NT_023935AL353707743408603      
S/G/Y/R/B/O NT_023935AL138749744661333      
S/G/Y/R/B/O NT_023935AL354682746981893CHLC.GATA63A079204.001 AL354682.22
S/G/Y/R/B/O NT_023935AL353666747609643      
S/G/Y/R/B/O NT_023935AL445672748227623      
S/G/Y/R/B/O NT_023935AL162397750196023AFMB358XE99202.001 AL162397.14
S/G/Y/R/B/O NT_023935AL161727750537563      
S/G/Y/R/B/O NT_023935AL353682752118653      
S/G/Y/R/B/O NT_023935AL365190753020963      
S/G/Y/R/B/O NT_023935AL591368753895643      
S/G/Y/R/B/O NT_023935AL158154756030533CHLC.GAAT4F029208.001 AL158154.27, AL355380.5
S/G/Y/R/B/O NT_023935AL355985756242153      
S/G/Y/R/B/O NT_023935AL158047756871843      
S/G/Y/R/B/O NT_023935AL357032759346423CHLC.GATA3D049207.001 AL357032.13
S/G/Y/R/B/O NT_023935AL162726760002513      
S/G/Y/R/B/O NT_023935AL356490761940753      
S/G/Y/R/B/O NT_023935AL353774763374693D9S17859209.001 AL353774.11
S/G/Y/R/B/O NT_023935AL133391764963473D9S2649206.001 AL133391.5
S/G/Y/R/B/O NT_023935AL359202765216633      
S/G/Y/R/B/O NT_023935AL499602767483453CHLC.GATA74G059211.001 AL499602.6
S/G/Y/R/B/O NT_023935AL671136768277563D9S1679210.001 AL137847.12, AL671136.3
S/G/Y/R/B/O NT_023935AL137847768287753      
S/G/Y/R/B/O NT_023935AL161786770102033CHLC.GATA22H049214.001 AC012232.3, AL161786.12
S/G/Y/R/B/O NT_023935AL161786770447313WI-24149212.001 AC012232.3, AL161786.12
S/G/Y/R/B/O NT_023935AL353641771138233      
S/G/Y/R/B/O NT_023935AL450026771494003D9S1529213.001 AL450026.10
S/G/Y/R/B/O NT_023935AL354920772294643      


  NT_023935 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_023935AL662787773981683      
S/G/Y/R/B/O NT_023935AL354733774597733      
S/G/Y/R/B/O NT_023935AC012279776473521      
S/G/Y/R/B/O NT_023935AL390838776734063      
S/G/Y/R/B/O NT_023935AL356134778671153      
S/G/Y/R/B/O NT_023935AL353787779548183      
S/G/Y/R/B/O NT_023935AL157886780364573      
S/G/Y/R/B/O NT_023935AL354692781914123      
S/G/Y/R/B/O NT_023935AL390777783751763WI-48609215.001 AC013261.3, AL390777.13
S/G/Y/R/B/O NT_023935AL390777784693513IB35599216.001 AC007524.12, AL390777.13
S/G/Y/R/B/O NT_023935AL596132784891233AFMB335WB19217.001 AL596132.7
S/G/Y/R/B/O NT_023935AL445532786029193      
S/G/Y/R/B/O NT_023935AL354897787725483      
S/G/Y/R/B/O NT_023935AL159991789005403      
S/G/Y/R/B/O NT_023935AL583827789559073D9S17909218.001 AL583827.7
S/G/Y/R/B/O NT_023935AL451132791353643CHLC.GATA11E119222.001 AL451132.9
S/G/Y/R/B/O NT_023935AL451131792050963WI-23319221.001 AC009919.3, AL451131.5
S/G/Y/R/B/O NT_023935AL451131792103463WI-94479219.001 AL451131.5
S/G/Y/R/B/O NT_023935AL157882792977023D9S18659223.001 AL157882.5
S/G/Y/R/B/O NT_023935AL353743794247253      
S/G/Y/R/B/O NT_023935AL161453796064893      
S/G/Y/R/B/O NT_023935AL161447796848043WI-67589224.001 AL161447.20
S/G/Y/R/B/O NT_023935AL450106797975393      
S/G/Y/R/B/O NT_023935AL137849799232073WI-84291913.004 AC012451.8, AL137849.13
S/G/Y/R/B/O NT_023935AL353678799744443      
S/G/Y/R/B/O NT_023935AL158828800435263      
S/G/Y/R/B/O NT_023935AL353613802733913WI-99059225.001 AL353613.10
S/G/Y/R/B/O NT_023935AL159996803549523      
S/G/Y/R/B/O NT_023935AL158149805432093      
S/G/Y/R/B/O NT_023935AL513318806651963D9S16809227.001 AL513318.8
S/G/Y/R/B/O NT_023935AL513318807266773AFMA223XD59226.001 AC021249.3, AL513318.8
S/G/Y/R/B/O NT_023935AL158205807946013      
S/G/Y/R/B/O NT_023935AL136367808607723      
S/G/Y/R/B/O NT_023935AL353752809356033      
S/G/Y/R/B/O NT_023935AL161787811115243      
S/G/Y/R/B/O NT_023935AL591852812293353      
S/G/Y/R/B/O NT_023935AL160279813670403NIB7229228.001 AL160279.21, AL645762.10
S/G/Y/R/B/O NT_023935AL160279813897653WI-75419229.001 AL160279.21, AL645762.10