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  Chromosome 9 - YAC Map - Single Contig
 

Chromosome 9 - YAC Map - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_033218 NT_008413 NT_027081 NT_035002 NT_023974 NT_033214 NT_030759 NT_030753
NT_033213 NT_035003 NT_033210 NT_035004 NT_008389 NT_035005 NT_035006 NT_035007
NT_035008 NT_033219 NT_033217 NT_035009 NT_029359 NT_033209 NT_033206 NT_033208
NT_035010 NT_031835 NT_033212 NT_031832 NT_035011 NT_033205 NT_033211 NT_033207
NT_008580 NT_023935 NT_028278 NT_023975 NT_023932 NT_024010 NT_035012 NT_008476
NT_035013 NT_033216 NT_008470 NT_017568 NT_029366 NT_008338 NT_035014 NT_017539
NT_008554 NT_030058 NT_019501 NT_033215 NT_024000 NT_035015 NT_023929


  NT_029366
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_029366AL1582081177239703      
S/G/Y/R/B/O NT_029366AC0064501177323143      
S/G/Y/R/B/O NT_029366AL1580521179234313D9S2829392.001 AL158052.10
S/G/Y/R/B/O NT_029366AL4452841180803863      
S/G/Y/R/B/O NT_029366AL1627241180941463D9S18819380.001 AL162724.16
S/G/Y/R/B/O NT_029366AL1378461182358973WI-69549385.001 AL137846.24
S/G/Y/R/B/O NT_029366AL1378461182714203WI-98889382.001 AL137846.24
S/G/Y/R/B/O NT_029366AL3549791184020013D9S18409387.001 AL161456.16, AL354979.17
S/G/Y/R/B/O NT_029366AL6698181184496583      
S/G/Y/R/B/O NT_029366AL1580751185568473AFMA212WE19386.001 AL158075.11
S/G/Y/R/B/O NT_029366AL3549281186916063WI-82499383.001 AL354928.9
S/G/Y/R/B/O NT_029366AL3549281187562093NIB19299384.001 AL354928.9
S/G/Y/R/B/O NT_029366AL4511251187936733      
S/G/Y/R/B/O NT_029366AL4459301190028533D9S18259394.001 AC009195.3, AL445930.11
S/G/Y/R/B/O NT_029366AL4459301190032403D9S17899395.001 AC009195.3, AL445930.11
S/G/Y/R/B/O NT_029366AL3547101191132393WI-60059381.001 AL139222.6, AL354702.7, AL354710.17
S/G/Y/R/B/O NT_029366AL6272231192197023      
S/G/Y/R/B/O NT_029366AL3596321193143953NIB14869397.001 AL359632.9, AL583823.6
S/G/Y/R/B/O NT_029366AL1625841194134313CHLC.GAAT11F099396.001 AL162584.9
S/G/Y/R/B/O NT_029366AL3580741195605873      
S/G/Y/R/B/O NT_029366AL6273031196676683      
S/G/Y/R/B/O NT_029366AL4451861198470123D9S2669388.001 AL162387.3, AL445186.4
S/G/Y/R/B/O NT_029366AL5899231198899853      
S/G/Y/R/B/O NT_029366AL4456641199926703      
S/G/Y/R/B/O NT_029366AL1623911201516723      
S/G/Y/R/B/O NT_029366AC0064431201780923      
S/G/Y/R/B/O NT_029366AL3563091203847283      
S/G/Y/R/B/O NT_029366AL1619081204289833      
S/G/Y/R/B/O NT_029366AL1617311205331993      
S/G/Y/R/B/O NT_029366AL3549441207155513      
S/G/Y/R/B/O NT_029366AL1601691207626953      
S/G/Y/R/B/O NT_029366AL3568621208847243      
S/G/Y/R/B/O NT_029366AL3576231210282053      
S/G/Y/R/B/O NT_029366AL4502631210656253      
S/G/Y/R/B/O NT_029366AL4452221212212973      
S/G/Y/R/B/O NT_029366AL3901161214465673      
S/G/Y/R/B/O NT_029366AL1624261214656693      
S/G/Y/R/B/O NT_029366AL1625861216270073      
S/G/Y/R/B/O NT_029366AL1579351217036493      
S/G/Y/R/B/O NT_029366AL3602681218678503      
S/G/Y/R/B/O NT_029366AL5907081221620173CHLC.GGAA8B0492.001 AC006312.8, AL590708.18
S/G/Y/R/B/O NT_029366AL5907221221697333      
S/G/Y/R/B/O NT_029366AL3590911221797863      
S/G/Y/R/B/O NT_029366AL4452871223622293      
S/G/Y/R/B/O NT_029366AL3564811223983453      
S/G/Y/R/B/O NT_029366AL3596781225716443WI-783912409.002 AC008401.3, AC008865.3, AC008905.6, AL359678.15
S/G/Y/R/B/O NT_029366AL4419921225783953      
S/G/Y/R/B/O NT_029366AL6721421228330163D9S2609389.001 AL672142.9
S/G/Y/R/B/O NT_029366AL5922111228732382      
S/G/Y/R/B/O NT_029366AL1581511229694983      


  NT_029366 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerYAC ChrWI YACPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_029366AL1617851231319433      
S/G/Y/R/B/O NT_029366AL3538031232034063      
S/G/Y/R/B/O NT_029366AL3910561234843923D9S1599390.001 AC007779.3, AL391056.25
S/G/Y/R/B/O NT_029366AL5903691234945643      
S/G/Y/R/B/O NT_029366AL5922191236183203      
S/G/Y/R/B/O NT_029366AL1582071236779263      
S/G/Y/R/B/O NT_029366AL1361411238458893      
S/G/Y/R/B/O NT_029366AL3921051239736723      
S/G/Y/R/B/O NT_029366AL3600041240148113NIB14429398.001 AC006241.1, AL360004.22
S/G/Y/R/B/O NT_029366AL3600041240168833WI-64949399.001 AC006241.1, AL360004.22
S/G/Y/R/B/O NT_029366 - D9S1799391.001 AL159997.14
S/G/Y/R/B/O NT_029366 - D9S1649393.001 AC002355.1