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Chromosome 4 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006171
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006171AC0683661674152651        
S/G/Y/R/B/O NT_006171AC1047931674418523AFMB349ZH54161.504161.911AC068366, AC068366, AC104793
S/G/Y/R/B/O NT_006171AC0792271676913873AFM036XG114160.904161.911 AC079227
S/G/Y/R/B/O NT_006171AC0842811678433053GATA4C05  4161.911 AC084281
S/G/Y/R/B/O NT_006171AC0842811678579863GATA5B09  4161.911 AC084281
S/G/Y/R/B/O NT_006171AC1052511678637483        
S/G/Y/R/B/O NT_006171AC0967171679067193        
S/G/Y/R/B/O NT_006171AC0231361681201863AFM296VD14162.104161.911 AC023136
S/G/Y/R/B/O NT_006171AC1081631681973393        
S/G/Y/R/B/O NT_006171AC1081621682906431        
S/G/Y/R/B/O NT_006171AC1052841684742671        
S/G/Y/R/B/O NT_006171AC1147701685606881AFMA071WG54162.104162.471AC105284, AC079960, AC105284, AC114770
S/G/Y/R/B/O NT_006171AC0974871685750221        
S/G/Y/R/B/O NT_006171AC1070551687385263        
S/G/Y/R/B/O NT_006171AC0938741688813203        
S/G/Y/R/B/O NT_006171AC0975071690822993AFM025XD2  4166.851 AC097507
S/G/Y/R/B/O NT_006171AC0975071690822993AFM025XD24170.90  1 AC097507
S/G/Y/R/B/O NT_006171AC0975021692045971        
S/G/Y/R/B/O NT_006171AC0973791692390073        
S/G/Y/R/B/O NT_006171AC0051501693350873        
S/G/Y/R/B/O NT_006171AC0211341695908973AFM304VC94162.104162.471AC111192, AC021134, AC111192
S/G/Y/R/B/O NT_006171AC1111921696252811        
S/G/Y/R/B/O NT_006171AC0847521697414423        
S/G/Y/R/B/O NT_006171AC0222721697962513UT1394  4161.911 AC022272
S/G/Y/R/B/O NT_006171AC0792381699556443        
S/G/Y/R/B/O NT_006171AC1151131700961063        
S/G/Y/R/B/O NT_006171AC0937881701206963        
S/G/Y/R/B/O NT_006171AC0988671702795433        
S/G/Y/R/B/O NT_006171AC0926311704218571        
S/G/Y/R/B/O NT_006171AC1122471706113251        
S/G/Y/R/B/O NT_006171AC0792321706939013        
S/G/Y/R/B/O NT_006171AC1052501708631823        
S/G/Y/R/B/O NT_006171AC0792401709902763ATA27E06  4164.811 AC079240
S/G/Y/R/B/O NT_006171AC0965631711324783        
S/G/Y/R/B/O NT_006171AC0685481712407603        
S/G/Y/R/B/O NT_006171AC0741981712808973        
S/G/Y/R/B/O NT_006171AC1046201714610751        
S/G/Y/R/B/O NT_006171AC0800791716286613        
S/G/Y/R/B/O NT_006171AC0938421717869883MFD223  4166.851 AC093842
S/G/Y/R/B/O NT_006171AC0938421718442273AFM198YF104165.804166.851 AC093842
S/G/Y/R/B/O NT_006171AC0125041718698613UT7453  4167.551 AC012504
S/G/Y/R/B/O NT_006171AC1070591720560883        
S/G/Y/R/B/O NT_006171AC0551201721006343        
S/G/Y/R/B/O NT_006171AC1084651722361931        
S/G/Y/R/B/O NT_006171AC1068721723238353        
S/G/Y/R/B/O NT_006171AC0237721725101453GATA24C03  4167.551AC104620, AC104620