Home    Genome Browser    BLAT Search    Help
  Chromosome 4 - Genetic Maps - Single Contig
 

Chromosome 4 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006316
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006316AC021248204700201        
S/G/Y/R/B/O NT_006316AC058821204738161        
S/G/Y/R/B/O NT_006316AC020706204772561        
S/G/Y/R/B/O NT_006316AC105290264839441AFMA290VD9438.90438.771 AC105290
S/G/Y/R/B/O NT_006316AC105290265064651AFMA065XG9438.80438.771 AC105290
S/G/Y/R/B/O NT_006316AC105290265411911AFMA045ZD5438.90439.301AC092436, AC006393, AC092436, AC105290
S/G/Y/R/B/O NT_006316AC018967205308171        
S/G/Y/R/B/O NT_006316AC114736206377731        
S/G/Y/R/B/O NT_006316AC097457207688293GATA87B03  433.961 AC097457
S/G/Y/R/B/O NT_006316AC024595207838351        
S/G/Y/R/B/O NT_006316AC109362209482383        
S/G/Y/R/B/O NT_006316AC103562210293003UT1298  435.031AC093658, AC093658, AC103562
S/G/Y/R/B/O NT_006316AC024230212255913UT878  433.421 AC024230, AL356281
S/G/Y/R/B/O NT_006316AC110767212772373        
S/G/Y/R/B/O NT_006316AC114728213158291        
S/G/Y/R/B/O NT_006316AC093658213759981        
S/G/Y/R/B/O NT_006316AC093898215477893GATA81G05  433.421AC112245, AC093898, AC112245
S/G/Y/R/B/O NT_006316AC093898215513853AFM207WA11432.60433.421AC112245, AC093898, AC112245
S/G/Y/R/B/O NT_006316AC110074215761193        
S/G/Y/R/B/O NT_006316AC112245216124011        
S/G/Y/R/B/O NT_006316AC006840217900683AFM312WB1432.60433.961AC114736, AC006840, AC114736
S/G/Y/R/B/O NT_006316AC079755218327323        
S/G/Y/R/B/O NT_006316AC098862220459203ATA28H07  433.961 AC098862
S/G/Y/R/B/O NT_006316AC096718221381723        
S/G/Y/R/B/O NT_006316AC108011223029171        
S/G/Y/R/B/O NT_006316AC092577223808123        
S/G/Y/R/B/O NT_006316AC021118224547403        
S/G/Y/R/B/O NT_006316AC104065226473543        
S/G/Y/R/B/O NT_006316AC097505227479543AFM200WC11  435.031 AC007762
S/G/Y/R/B/O NT_006316AC097505227479543AFM200WC11434.20  1 AC007762
S/G/Y/R/B/O NT_006316AC109636229045243        
S/G/Y/R/B/O NT_006316AC108161229743391        
S/G/Y/R/B/O NT_006316AC093735231662743        
S/G/Y/R/B/O NT_006316AC093814232776633        
S/G/Y/R/B/O NT_006316AC098583234388643        
S/G/Y/R/B/O NT_006316AC093917235642833        
S/G/Y/R/B/O NT_006316AC016782237795091AFMA345YF1435.30435.561 AC016782
S/G/Y/R/B/O NT_006316AC093626238227771        
S/G/Y/R/B/O NT_006316AC097512240089413AFMA244ZD1435.90436.631 AC097512
S/G/Y/R/B/O NT_006316AC114912240403531        
S/G/Y/R/B/O NT_006316AC092440241318253        
S/G/Y/R/B/O NT_006316AC098676242966063        
S/G/Y/R/B/O NT_006316AC006052243165323        
S/G/Y/R/B/O NT_006316AC093607246029063AFM234VA1435.90436.091 AC093607
S/G/Y/R/B/O NT_006316AC097508246226183        
S/G/Y/R/B/O NT_006316AC092834248442443AFM333VC9435.80436.631 AC092834
S/G/Y/R/B/O NT_006316AC108071248728493        
S/G/Y/R/B/O NT_006316AC006229249357223        
S/G/Y/R/B/O NT_006316AC108076251819843AFM158XC7436.50437.161 AC108076
S/G/Y/R/B/O NT_006316AC092846252186873AFM290ZG5436.40437.161 AC005769, AC027482, AC092846


  NT_006316 (cont)
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006316AC108028253955271        
S/G/Y/R/B/O NT_006316AC115110254022741        
S/G/Y/R/B/O NT_006316AC114777255873951        
S/G/Y/R/B/O NT_006316AC006390256972173AFM207WE11438.30438.771AC114777, AC006390, AC114777
S/G/Y/R/B/O NT_006316AC006390257866913AFMA114ZB9438.30438.771 AC006390
S/G/Y/R/B/O NT_006316AC073829258240201AFMA101YD1438.30438.771 AC073829, AC116422
S/G/Y/R/B/O NT_006316AC113614258795801        
S/G/Y/R/B/O NT_006316AC007073259558153AFMA337WF1438.20438.771AC113614, AC007073, AC113614
S/G/Y/R/B/O NT_006316AC104662260781041        
S/G/Y/R/B/O NT_006316AC108218262558313AFMB309XA5438.30438.772AC058821, AC044900, AC058821, AC105145, AC108218, AC110812
S/G/Y/R/B/O NT_006316AC092436265929353        
S/G/Y/R/B/O NT_006316AC093660267274811        
S/G/Y/R/B/O NT_006316AC006839267285351        
S/G/Y/R/B/O NT_006316AC097714268853663UT5665  439.301AC006839, AC093660, AC006839, AC093660, AC097714
S/G/Y/R/B/O NT_006316AC111003270552981        
S/G/Y/R/B/O NT_006316AC110779270840651        
S/G/Y/R/B/O NT_006316AC097109270919111        
S/G/Y/R/B/O NT_006316AC084735271943091        
S/G/Y/R/B/O NT_006316AC093637272899783        
S/G/Y/R/B/O NT_006316AC093807274964683MFD281  442.741 AC092446, AC093807
S/G/Y/R/B/O NT_006316AC107390275706043        
S/G/Y/R/B/O NT_006316AC106047276833023        
S/G/Y/R/B/O NT_006316AC006928278572213        
S/G/Y/R/B/O NT_006316AC111195280246921        
S/G/Y/R/B/O NT_006316AC024132281565193ATA27C07  442.741 AC024132
S/G/Y/R/B/O NT_006316AC006568283723153AFM312WC9443.30444.131 AC006568
S/G/Y/R/B/O NT_006316AC093845283744863        
S/G/Y/R/B/O NT_006316AC097380285109513AFM016XF3443.20443.591 AC020628, AC097380
S/G/Y/R/B/O NT_006316AC093854285398633        
S/G/Y/R/B/O NT_006316AC093753287055263        
S/G/Y/R/B/O NT_006316AC007106288099093        
S/G/Y/R/B/O NT_006316AC098863289800983        
S/G/Y/R/B/O NT_006316AC108012290673591        
S/G/Y/R/B/O NT_006316AC093791291125523        
S/G/Y/R/B/O NT_006316AC109588292787413        
S/G/Y/R/B/O NT_006316AC097480293361823        
S/G/Y/R/B/O NT_006316AC091602295386863MFD194A  444.661 AC091602
S/G/Y/R/B/O NT_006316AC091602296265133UT8051  444.661 AC091602
S/G/Y/R/B/O NT_006316AC096566296388413        
S/G/Y/R/B/O NT_006316AC111004297387723