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Chromosome 4 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006198
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006198AC0847241753247991        
S/G/Y/R/B/O NT_006198AC1068781755095213        
S/G/Y/R/B/O NT_006198AC0797681756448633        
S/G/Y/R/B/O NT_006198AC0848661758367443GATA64D04  4171.391 AC084866
S/G/Y/R/B/O NT_006198AC0226311759718241        
S/G/Y/R/B/O NT_006198AC0693061759817963        
S/G/Y/R/B/O NT_006198AC0689451760291493        
S/G/Y/R/B/O NT_006198AC0742551762486253        
S/G/Y/R/B/O NT_006198AC0965711763825513        
S/G/Y/R/B/O NT_006198AC0967141764741893        
S/G/Y/R/B/O NT_006198AC0693021766351503AFM142XD6  4171.391 AC069302
S/G/Y/R/B/O NT_006198AC0693021766351503AFM142XD64169.10  1 AC069302
S/G/Y/R/B/O NT_006198AC0974861766649043        
S/G/Y/R/B/O NT_006198AC0341591768211753        
S/G/Y/R/B/O NT_006198AC0926391770217303        
S/G/Y/R/B/O NT_006198AC1080741770852593        
S/G/Y/R/B/O NT_006198AC0274111772118941        
S/G/Y/R/B/O NT_006198AC0259661772133871        
S/G/Y/R/B/O NT_006198AC0931631772454033AFM198XF104178.404173.591 AC109457
S/G/Y/R/B/O NT_006198AC0931631772590453AFM345WH94178.404173.591 AC109457
S/G/Y/R/B/O NT_006198AC0742541773819673GATA2F08  4175.621 AC074254
S/G/Y/R/B/O NT_006198AC0937641774909553        
S/G/Y/R/B/O NT_006198AC0255611775573243        
S/G/Y/R/B/O NT_006198AC0974961777095203        
S/G/Y/R/B/O NT_006198AC0950631777968703        
S/G/Y/R/B/O NT_006198AC0247061780056301AFM070YA9  4175.621 AC024706
S/G/Y/R/B/O NT_006198AC0247061780056301AFM070YA94179.50  1 AC024706
S/G/Y/R/B/O NT_006198AC1100811781162413        
S/G/Y/R/B/O NT_006198AC1080641781590783        
S/G/Y/R/B/O NT_006198AC0258211782616993        
S/G/Y/R/B/O NT_006198 - UT1343  4171.511AC107210, AC079086, AC107210
S/G/Y/R/B/O NT_006198 - UT513  4171.511AC105148, AC105148
S/G/Y/R/B/O NT_006198 - UT880  4175.620AC021528, AC021528