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Chromosome 4 - Genetic Maps - Single Contig

Description of this page Main Reports Page Main Assembly Page Main Map Page Whole Chromosome Single Contigs

Line color code:

  • White: no markers placed on this accession
  • Blue: marker placement on STS map consistent with alignment of assembly contigs
  • Green: marker placement on STS map slightly inconsistent with alignment of assembly contigs
  • Pink: marker placement on STS map inconsistent with alignment of assembly contigs, but marker placed on same chromosome in STS map
  • Red: marker placed on different chromosome in STS map
  • Yellow: marker not placed on accession used in assembly, but alignment of assembly contigs indicates it falls within this contig
NT_026996 NT_006111 NT_022865 NT_006081 NT_033075 NT_029956 NT_006051 NT_033060
NT_033064 NT_006362 NT_006307 NT_006342 NT_029958 NT_016407 NT_033056 NT_030649
NT_006344 NT_023072 NT_033076 NT_006350 NT_006285 NT_006316 NT_023052 NT_006189
NT_022794 NT_006305 NT_022751 NT_022995 NT_033067 NT_006098 NT_029274 NT_033069
NT_016297 NT_022782 NT_033059 NT_006238 NT_022831 NT_022853 NT_022850 NT_022778
NT_022852 NT_033063 NT_022813 NT_022836 NT_022862 NT_006303 NT_030640 NT_033073
NT_006281 NT_006216 NT_033072 NT_022760 NT_006109 NT_006328 NT_022844 NT_030642
NT_006114 NT_030659 NT_006204 NT_033074 NT_023068 NT_006201 NT_006383 NT_006397
NT_033061 NT_033068 NT_006365 NT_028147 NT_028173 NT_006371 NT_025694 NT_031780
NT_016599 NT_031781 NT_016354 NT_033055 NT_033062 NT_033065 NT_006167 NT_006302
NT_022755 NT_022753 NT_022803 NT_022846 NT_022856 NT_022805 NT_022819 NT_022845
NT_006124 NT_022811 NT_006127 NT_006258 NT_016606 NT_029950 NT_028160 NT_029954
NT_022851 NT_022832 NT_015169 NT_006129 NT_022740 NT_029955 NT_022801 NT_022824
NT_006171 NT_022776 NT_022768 NT_006198 NT_006257 NT_022775 NT_006118 NT_022792
NT_006256 NT_006169 NT_022841 NT_033070 NT_022800 NT_033066 NT_033071 NT_028146
NT_029961 NT_025688


  NT_006344
 
LinksContigAccessionChr StartPhsSTS MarkerGen ChrGenethonMarsh ChrMarshfieldPlcOther Accessions in AssemblyAll Accessions
S/G/Y/R/B/O NT_006344AC025562149976391        
S/G/Y/R/B/O NT_006344AC006425150512661        
S/G/Y/R/B/O NT_006344AC114744150752961        
S/G/Y/R/B/O NT_006344AC005798152918493AFMB286WG1428.20429.141 AC005798, AC092459
S/G/Y/R/B/O NT_006344AC005598154710443AFMA081TE9428.20429.141 AC005598
S/G/Y/R/B/O NT_006344AC005598154853713AFM299ZF5428.20429.681 AC005598
S/G/Y/R/B/O NT_006344AC108063154948863        
S/G/Y/R/B/O NT_006344AC110088156534681        
S/G/Y/R/B/O NT_006344AC006427156975993        
S/G/Y/R/B/O NT_006344AC097515159194143AFM109XD12429.10429.681 AC097515
S/G/Y/R/B/O NT_006344AC097515159832203GGAT18G02  429.681 AC097515
S/G/Y/R/B/O NT_006344AC105353160473813UT1508  429.681 AC105353
S/G/Y/R/B/O NT_006344AC104656160541783        
S/G/Y/R/B/O NT_006344AC005690162275253        
S/G/Y/R/B/O NT_006344AC106894164189493        
S/G/Y/R/B/O NT_006344AC110758165110801        
S/G/Y/R/B/O NT_006344AC069188165409981        
S/G/Y/R/B/O NT_006344AC107388165445601        
S/G/Y/R/B/O NT_006344AC068854165505731        
S/G/Y/R/B/O NT_006344AC093871166132413        
S/G/Y/R/B/O NT_006344AC007102167790593        
S/G/Y/R/B/O NT_006344AC097516169533173        
S/G/Y/R/B/O NT_006344AC106043171103813        
S/G/Y/R/B/O NT_006344AC079399171123753        
S/G/Y/R/B/O NT_006344AC005768174150413AFMA309XG9432.60433.421 AC005768
S/G/Y/R/B/O NT_006344AC006160174592113        
S/G/Y/R/B/O NT_006344AC093600177009253AFMA218YF1432.60  2AB053170, AB053170, AC018596, AC093600
S/G/Y/R/B/O NT_006344AC093600177009253AFMA218YF1  433.962AB053170, AB053170, AC018596, AC093600
S/G/Y/R/B/O NT_006344AC074179178000573        
S/G/Y/R/B/O NT_006344AC006231178442233